RNA–Protein interactions for RNA: ENST00000586588.5

DNMT1-207, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 3,094 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-207ENST00000586588 GFM2Q969S9 779 aaKnown RBP13.89□□□□□ -0.19
DNMT1-207ENST00000586588 SEPT11Q9NVA2 429 aaKnown RBP13.89□□□□□ -0.19
DNMT1-207ENST00000586588 SSX2IPQ9Y2D8 614 aa13.89□□□□□ -0.19
DNMT1-207ENST00000586588 SBF2Q86WG5 1849 aa13.88□□□□□ -0.19
DNMT1-207ENST00000586588 POTECB2RU33 542 aa13.88□□□□□ -0.19
DNMT1-207ENST00000586588 ZBED4O75132 1171 aa13.88□□□□□ -0.19
DNMT1-207ENST00000586588 KRT18P05783 430 aaKnown RBP13.88□□□□□ -0.19
DNMT1-207ENST00000586588 FGFR1P11362 822 aa13.88□□□□□ -0.19
DNMT1-207ENST00000586588 HARSP12081 509 aaKnown RBP13.88□□□□□ -0.19
DNMT1-207ENST00000586588 CDK16Q00536 496 aa13.88□□□□□ -0.19
DNMT1-207ENST00000586588 CACNB1Q02641 598 aaPredicted RBP13.88□□□□□ -0.19
DNMT1-207ENST00000586588 MEX3CQ5U5Q3 659 aaKnown RBP13.88□□□□□ -0.19
DNMT1-207ENST00000586588 PDSS2Q86YH6 399 aa13.88□□□□□ -0.19
DNMT1-207ENST00000586588 ZNF34Q8IZ26 560 aa13.88□□□□□ -0.19
DNMT1-207ENST00000586588 RFWD2Q8NHY2 731 aa13.88□□□□□ -0.19
DNMT1-207ENST00000586588 CCDC110Q8TBZ0 833 aa13.88□□□□□ -0.19
DNMT1-207ENST00000586588 HAS1Q92839 578 aa13.88□□□□□ -0.19
DNMT1-207ENST00000586588 MKL1Q969V6 931 aa13.88□□□□□ -0.19
DNMT1-207ENST00000586588 LBHD1Q9BQE6 289 aaPredicted RBP13.88□□□□□ -0.19
DNMT1-207ENST00000586588 TMEM47Q9BQJ4 181 aa13.88□□□□□ -0.19
DNMT1-207ENST00000586588 KIAA1024Q9UPX6 916 aa13.88□□□□□ -0.19
DNMT1-207ENST00000586588 ERVV-1B6SEH8 477 aa13.88□□□□□ -0.19
DNMT1-207ENST00000586588 BUD23O43709 281 aaKnown RBP13.88□□□□□ -0.19
DNMT1-207ENST00000586588 FKBP6O75344 327 aa13.88□□□□□ -0.19
DNMT1-207ENST00000586588 TGDSO95455 350 aa13.88□□□□□ -0.19
DNMT1-207ENST00000586588 VIL1P09327 827 aaKnown RBP13.88□□□□□ -0.19
DNMT1-207ENST00000586588 RFX1P22670 979 aa13.88□□□□□ -0.19
DNMT1-207ENST00000586588 ADCY8P40145 1251 aa13.88□□□□□ -0.19
DNMT1-207ENST00000586588 ADARP55265 1226 aaKnown RBP13.88□□□□□ -0.19
DNMT1-207ENST00000586588 ARSHQ5FYA8 562 aa13.88□□□□□ -0.19
DNMT1-207ENST00000586588 LVRNQ6Q4G3 990 aa13.88□□□□□ -0.19
DNMT1-207ENST00000586588 ANKS1BQ7Z6G8 1248 aa13.88□□□□□ -0.19
DNMT1-207ENST00000586588 DIS3LQ8TF46 1054 aaKnown RBP13.88□□□□□ -0.19
DNMT1-207ENST00000586588 C1orf54Q8WWF1 131 aa13.88□□□□□ -0.19
DNMT1-207ENST00000586588 NSUN4Q96CB9 384 aaKnown RBP13.88□□□□□ -0.19
DNMT1-207ENST00000586588 NMD3Q96D46 503 aaKnown RBP13.88□□□□□ -0.19
DNMT1-207ENST00000586588 EBF3Q9H4W6 596 aa13.88□□□□□ -0.19
DNMT1-207ENST00000586588 DCTN4Q9UJW0 460 aa13.88□□□□□ -0.19
DNMT1-207ENST00000586588 PCDHA12Q9UN75 941 aa13.88□□□□□ -0.19
DNMT1-207ENST00000586588 COL4A1P02462 1669 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 OATP04181 439 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 HNRNPCP07910 306 aaKnown RBP eCLIP13.87□□□□□ -0.19
DNMT1-207ENST00000586588 GOLGA8HP0CJ92 632 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 DLATP10515 647 aaKnown RBP13.87□□□□□ -0.19
DNMT1-207ENST00000586588 KRT15P19012 456 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 YY1P25490 414 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 MAGEA4P43358 317 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 CASP4P49662 377 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 ARFIP2P53365 341 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 CHRNDQ07001 517 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 PKN2Q16513 984 aaKnown RBP13.87□□□□□ -0.19
DNMT1-207ENST00000586588 OLFML2BQ68BL8 750 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 AAGABQ6PD74 315 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 SATL1Q86VE3 508 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 AMIGO3Q86WK7 504 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 LRRC6Q86X45 466 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 OR6Y1Q8NGX8 325 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 C9orf72Q96LT7 481 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 FAM161BQ96MY7 647 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 CLIC5Q9NZA1 410 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 SPOPO43791 374 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 CIB2O75838 187 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 UQCRBP14927 111 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 SLC12A3P55017 1021 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 MAPK6Q16659 721 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 P3H1Q32P28 736 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 USH1GQ495M9 461 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 RSPH1Q8WYR4 309 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 C17orf75Q9HAS0 396 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 APEX2Q9UBZ4 518 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 TUBGCP4Q9UGJ1 667 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 ASTN1O14525 1302 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 CLDN3O15551 220 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 FMO5P49326 533 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 TMED1Q13445 227 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 MAP3K21Q5TCX8 1036 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 C12orf60Q5U649 245 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 PRUNE1Q86TP1 453 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 NOP9Q86U38 636 aaKnown RBP13.87□□□□□ -0.19
DNMT1-207ENST00000586588 ZNF276Q8N554 614 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 PSPC1Q8WXF1 523 aaKnown RBP13.87□□□□□ -0.19
DNMT1-207ENST00000586588 SLC35B4Q969S0 331 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 VPS11Q9H270 941 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 ZHX3Q9H4I2 956 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 TBCCD1Q9NVR7 557 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 NEU2Q9Y3R4 380 aa13.87□□□□□ -0.19
DNMT1-207ENST00000586588 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.86□□□□□ -0.19
DNMT1-207ENST00000586588 A0A0G2JND7 137 aa13.86□□□□□ -0.19
DNMT1-207ENST00000586588 GSTTP1A0A1W2PQM5 241 aa13.86□□□□□ -0.19
DNMT1-207ENST00000586588 USP17L3A6NCW0 530 aa13.86□□□□□ -0.19
DNMT1-207ENST00000586588 USP17L4A6NCW7 530 aa13.86□□□□□ -0.19
DNMT1-207ENST00000586588 TM7SF2O76062 418 aa13.86□□□□□ -0.19
DNMT1-207ENST00000586588 TSPY3P0CV98 308 aa13.86□□□□□ -0.19
DNMT1-207ENST00000586588 TSPY8P0CW00 308 aa13.86□□□□□ -0.19
DNMT1-207ENST00000586588 CPA3P15088 417 aa13.86□□□□□ -0.19
DNMT1-207ENST00000586588 EIF4BP23588 611 aaKnown RBP13.86□□□□□ -0.19
DNMT1-207ENST00000586588 ZBTB16Q05516 673 aa13.86□□□□□ -0.19
DNMT1-207ENST00000586588 UBE4AQ14139 1066 aa13.86□□□□□ -0.19
DNMT1-207ENST00000586588 SLC4A8Q2Y0W8 1093 aa13.86□□□□□ -0.19
DNMT1-207ENST00000586588 SUSD4Q5VX71 490 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms