RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 ANP32AP39687 249 aaKnown RBP20.24■□□□□ 0.83
PPP4R1-215ENST00000580182 POU5F1Q01860 360 aaKnown RBP20.24■□□□□ 0.83
PPP4R1-215ENST00000580182 ZP2Q05996 745 aa20.24■□□□□ 0.83
PPP4R1-215ENST00000580182 DPYDQ12882 1025 aa20.24■□□□□ 0.83
PPP4R1-215ENST00000580182 BMT2Q1RMZ1 405 aa20.24■□□□□ 0.83
PPP4R1-215ENST00000580182 TMC5Q6UXY8 1006 aa20.24■□□□□ 0.83
PPP4R1-215ENST00000580182 FMR1NBQ8N0W7 255 aaPredicted RBP20.24■□□□□ 0.83
PPP4R1-215ENST00000580182 GPD1LQ8N335 351 aa20.24■□□□□ 0.83
PPP4R1-215ENST00000580182 TSPAN18Q96SJ8 248 aa20.24■□□□□ 0.83
PPP4R1-215ENST00000580182 ADAM7Q9H2U9 754 aa20.24■□□□□ 0.83
PPP4R1-215ENST00000580182 AGPAT3Q9NRZ7 376 aa20.24■□□□□ 0.83
PPP4R1-215ENST00000580182 RBAKQ9NYW8 714 aaPredicted RBP20.24■□□□□ 0.83
PPP4R1-215ENST00000580182 HSPBP1Q9NZL4 362 aa20.24■□□□□ 0.83
PPP4R1-215ENST00000580182 DERAQ9Y315 318 aa20.24■□□□□ 0.83
PPP4R1-215ENST00000580182 C2CD2Q9Y426 696 aa20.24■□□□□ 0.83
PPP4R1-215ENST00000580182 UBE4BO95155 1302 aa20.24■□□□□ 0.83
PPP4R1-215ENST00000580182 TTC28Q96AY4 2481 aa20.24■□□□□ 0.83
PPP4R1-215ENST00000580182 IL18RAPO95256 599 aa20.23■□□□□ 0.83
PPP4R1-215ENST00000580182 MYL1P05976 194 aa20.23■□□□□ 0.83
PPP4R1-215ENST00000580182 CREMQ03060 361 aa20.23■□□□□ 0.83
PPP4R1-215ENST00000580182 SNW1Q13573 536 aaKnown RBP20.23■□□□□ 0.83
PPP4R1-215ENST00000580182 VARS2Q5ST30 1063 aaKnown RBP20.23■□□□□ 0.83
PPP4R1-215ENST00000580182 C9orf57Q5W0N0 161 aa20.23■□□□□ 0.83
PPP4R1-215ENST00000580182 SCARA3Q6AZY7 606 aa20.23■□□□□ 0.83
PPP4R1-215ENST00000580182 LILRA6Q6PI73 481 aa20.23■□□□□ 0.83
PPP4R1-215ENST00000580182 CBWD2Q8IUF1 395 aa20.23■□□□□ 0.83
PPP4R1-215ENST00000580182 ADHFE1Q8IWW8 467 aa20.23■□□□□ 0.83
PPP4R1-215ENST00000580182 ENGASEQ8NFI3 743 aa20.23■□□□□ 0.83
PPP4R1-215ENST00000580182 SUSD3Q96L08 255 aa20.23■□□□□ 0.83
PPP4R1-215ENST00000580182 MTRRQ9UBK8 725 aa20.23■□□□□ 0.83
PPP4R1-215ENST00000580182 SPDYE4A6NLX3 237 aa20.22■□□□□ 0.83
PPP4R1-215ENST00000580182 SPTLC1O15269 473 aa20.22■□□□□ 0.83
PPP4R1-215ENST00000580182 OR1D2P34982 312 aa20.22■□□□□ 0.83
PPP4R1-215ENST00000580182 ITIH3Q06033 890 aa20.22■□□□□ 0.83
PPP4R1-215ENST00000580182 PSMD2Q13200 908 aa20.22■□□□□ 0.83
PPP4R1-215ENST00000580182 CBX2Q14781 532 aaPredicted RBP20.22■□□□□ 0.83
PPP4R1-215ENST00000580182 KNOP1Q1ED39 458 aaKnown RBP20.22■□□□□ 0.83
PPP4R1-215ENST00000580182 GJD3Q8N144 294 aa20.22■□□□□ 0.83
PPP4R1-215ENST00000580182 SFXN1Q9H9B4 322 aa20.22■□□□□ 0.83
PPP4R1-215ENST00000580182 PDE11AQ9HCR9 933 aa20.22■□□□□ 0.83
PPP4R1-215ENST00000580182 DPP3Q9NY33 737 aa20.22■□□□□ 0.83
PPP4R1-215ENST00000580182 PRKAG3Q9UGI9 489 aa20.22■□□□□ 0.83
PPP4R1-215ENST00000580182 TIMM13Q9Y5L4 95 aaPredicted RBP20.22■□□□□ 0.83
PPP4R1-215ENST00000580182 CDY1Q9Y6F8 540 aa20.22■□□□□ 0.83
PPP4R1-215ENST00000580182 ANO9A1A5B4 782 aa20.21■□□□□ 0.83
PPP4R1-215ENST00000580182 C19orf67A6NJJ6 358 aa20.21■□□□□ 0.83
PPP4R1-215ENST00000580182 PIRO00625 290 aa20.21■□□□□ 0.83
PPP4R1-215ENST00000580182 SYN3O14994 580 aa20.21■□□□□ 0.83
PPP4R1-215ENST00000580182 GADD45BO75293 160 aaPredicted RBP20.21■□□□□ 0.83
PPP4R1-215ENST00000580182 RFPL2O75678 378 aa20.21■□□□□ 0.83
PPP4R1-215ENST00000580182 SSTR3P32745 418 aaPredicted RBP20.21■□□□□ 0.83
PPP4R1-215ENST00000580182 CYP2J2P51589 502 aa20.21■□□□□ 0.83
PPP4R1-215ENST00000580182 LMBRD2Q68DH5 695 aaPredicted RBP20.21■□□□□ 0.83
PPP4R1-215ENST00000580182 CES5AQ6NT32 575 aa20.21■□□□□ 0.83
PPP4R1-215ENST00000580182 PDXDC1Q6P996 788 aa20.21■□□□□ 0.83
PPP4R1-215ENST00000580182 ANKS3Q6ZW76 656 aa20.21■□□□□ 0.83
PPP4R1-215ENST00000580182 RDH13Q8NBN7 331 aa20.21■□□□□ 0.83
PPP4R1-215ENST00000580182 KREMEN2Q8NCW0 462 aa20.21■□□□□ 0.83
PPP4R1-215ENST00000580182 KHSRPQ92945 711 aaKnown RBP eCLIP20.21■□□□□ 0.833e-7■□□□□ 9.6
PPP4R1-215ENST00000580182 CHMP5Q9NZZ3 219 aa20.21■□□□□ 0.83
PPP4R1-215ENST00000580182 PCDHB8Q9UN66 801 aa20.21■□□□□ 0.83
PPP4R1-215ENST00000580182 BACE2Q9Y5Z0 518 aa20.21■□□□□ 0.83
PPP4R1-215ENST00000580182 M0QZQ0 153 aa20.2■□□□□ 0.82
PPP4R1-215ENST00000580182 KIAA0391O15091 583 aaKnown RBP20.2■□□□□ 0.82
PPP4R1-215ENST00000580182 AARSP49588 968 aaKnown RBP eCLIP20.2■□□□□ 0.82
PPP4R1-215ENST00000580182 LILRA4P59901 499 aa20.2■□□□□ 0.82
PPP4R1-215ENST00000580182 TFAMQ00059 246 aaKnown RBP20.2■□□□□ 0.82
PPP4R1-215ENST00000580182 PNOCQ13519 176 aa20.2■□□□□ 0.82
PPP4R1-215ENST00000580182 MRPL58Q14197 206 aaKnown RBP20.2■□□□□ 0.82
PPP4R1-215ENST00000580182 DSTYKQ6XUX3 929 aa20.2■□□□□ 0.82
PPP4R1-215ENST00000580182 RPGRIP1Q96KN7 1286 aa20.2■□□□□ 0.82
PPP4R1-215ENST00000580182 PHF7Q9BWX1 381 aaPredicted RBP20.2■□□□□ 0.82
PPP4R1-215ENST00000580182 POMKQ9H5K3 350 aa20.2■□□□□ 0.82
PPP4R1-215ENST00000580182 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.2■□□□□ 0.82
PPP4R1-215ENST00000580182 CCDC195A0A1B0GUA6 201 aa20.19■□□□□ 0.82
PPP4R1-215ENST00000580182 ZNF233A6NK53 670 aa20.19■□□□□ 0.82
PPP4R1-215ENST00000580182 TBC1D4O60343 1298 aa20.19■□□□□ 0.82
PPP4R1-215ENST00000580182 RHOBTB3O94955 611 aa20.19■□□□□ 0.82
PPP4R1-215ENST00000580182 SP100P23497 879 aaPredicted RBP20.19■□□□□ 0.82
PPP4R1-215ENST00000580182 FAM160A1Q05DH4 1040 aa20.19■□□□□ 0.82
PPP4R1-215ENST00000580182 RAB33AQ14088 237 aa20.19■□□□□ 0.82
PPP4R1-215ENST00000580182 HS2ST1Q7LGA3 356 aa20.19■□□□□ 0.82
PPP4R1-215ENST00000580182 GPR149Q86SP6 731 aa20.19■□□□□ 0.82
PPP4R1-215ENST00000580182 ERCC4Q92889 916 aaPredicted RBP20.19■□□□□ 0.82
PPP4R1-215ENST00000580182 PLEKHA4Q9H4M7 779 aa20.19■□□□□ 0.82
PPP4R1-215ENST00000580182 FBXL5Q9UKA1 691 aa20.19■□□□□ 0.82
PPP4R1-215ENST00000580182 FBXW11Q9UKB1 542 aa20.19■□□□□ 0.82
PPP4R1-215ENST00000580182 MAPK8IP1Q9UQF2 711 aa20.19■□□□□ 0.82
PPP4R1-215ENST00000580182 PTPRJQ12913 1337 aa20.19■□□□□ 0.82
PPP4R1-215ENST00000580182 MTCL1Q9Y4B5 1905 aaKnown RBP20.19■□□□□ 0.82
PPP4R1-215ENST00000580182 CUL9Q8IWT3 2517 aa20.19■□□□□ 0.82
PPP4R1-215ENST00000580182 SCN1AP35498 2009 aa20.19■□□□□ 0.82
PPP4R1-215ENST00000580182 C1RP00736 705 aa20.18■□□□□ 0.82
PPP4R1-215ENST00000580182 ARPP19P56211 112 aa20.18■□□□□ 0.82
PPP4R1-215ENST00000580182 SNRPFP62306 86 aaKnown RBP20.18■□□□□ 0.82
PPP4R1-215ENST00000580182 SNRNP35Q16560 246 aaKnown RBP20.18■□□□□ 0.82
PPP4R1-215ENST00000580182 CTXN3Q4LDR2 81 aa20.18■□□□□ 0.82
PPP4R1-215ENST00000580182 ATAT1Q5SQI0 421 aa20.18■□□□□ 0.82
PPP4R1-215ENST00000580182 NT5DC4Q86YG4 428 aa20.18■□□□□ 0.82
PPP4R1-215ENST00000580182 C12orf56Q8IXR9 622 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms