RNA–Protein interactions for RNA: ENST00000578875.5

PPP4R1-211, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-211ENST00000578875 SYT12Q8IV01 421 aa8.85□□□□□ -0.99
PPP4R1-211ENST00000578875 FMNL3Q8IVF7 1028 aa8.85□□□□□ -0.99
PPP4R1-211ENST00000578875 CRYGNQ8WXF5 182 aa8.85□□□□□ -0.99
PPP4R1-211ENST00000578875 ZNF512Q96ME7 567 aaPredicted RBP8.85□□□□□ -0.99
PPP4R1-211ENST00000578875 LRRC3Q9BY71 257 aa8.85□□□□□ -0.99
PPP4R1-211ENST00000578875 SMG9Q9H0W8 520 aaKnown RBP8.85□□□□□ -0.99
PPP4R1-211ENST00000578875 CSRNP2Q9H175 543 aa8.85□□□□□ -0.99
PPP4R1-211ENST00000578875 IL25Q9H293 177 aa8.85□□□□□ -0.99
PPP4R1-211ENST00000578875 RIC8AQ9NPQ8 531 aa8.85□□□□□ -0.99
PPP4R1-211ENST00000578875 BMP2KQ9NSY1 1161 aaPredicted RBP8.85□□□□□ -0.99
PPP4R1-211ENST00000578875 SRPK3Q9UPE1 567 aa8.85□□□□□ -0.99
PPP4R1-211ENST00000578875 PCDHB9Q9Y5E1 797 aa8.85□□□□□ -0.99
PPP4R1-211ENST00000578875 COL4A3BPQ9Y5P4 624 aa8.85□□□□□ -0.99
PPP4R1-211ENST00000578875 INSL5Q9Y5Q6 135 aa8.85□□□□□ -0.99
PPP4R1-211ENST00000578875 TDRD15B5MCY1 1934 aaKnown RBP8.85□□□□□ -0.99
PPP4R1-211ENST00000578875 B8ZZF3 427 aa8.84□□□□□ -0.99
PPP4R1-211ENST00000578875 B4GALT5O43286 388 aa8.84□□□□□ -0.99
PPP4R1-211ENST00000578875 TLX3O43711 291 aaPredicted RBP8.84□□□□□ -0.99
PPP4R1-211ENST00000578875 EDIL3O43854 480 aa8.84□□□□□ -0.99
PPP4R1-211ENST00000578875 PRKCBP05771 671 aa8.84□□□□□ -0.99
PPP4R1-211ENST00000578875 ATXN1LP0C7T5 689 aaKnown RBP8.84□□□□□ -0.99
PPP4R1-211ENST00000578875 HNRNPLP14866 589 aaKnown RBP eCLIP8.84□□□□□ -0.99
PPP4R1-211ENST00000578875 ATF2P15336 505 aa8.84□□□□□ -0.99
PPP4R1-211ENST00000578875 BRCC3P46736 316 aa8.84□□□□□ -0.99
PPP4R1-211ENST00000578875 PDE1AP54750 535 aa8.84□□□□□ -0.99
PPP4R1-211ENST00000578875 LAMTOR4Q0VGL1 99 aa8.84□□□□□ -0.99
PPP4R1-211ENST00000578875 TWF1Q12792 350 aa8.84□□□□□ -0.99
PPP4R1-211ENST00000578875 GRIK3Q13003 919 aa8.84□□□□□ -0.99
PPP4R1-211ENST00000578875 PSMD2Q13200 908 aa8.84□□□□□ -0.99
PPP4R1-211ENST00000578875 TUSC3Q13454 348 aa8.84□□□□□ -0.99
PPP4R1-211ENST00000578875 NAB2Q15742 525 aa8.84□□□□□ -0.99
PPP4R1-211ENST00000578875 MAPK6Q16659 721 aa8.84□□□□□ -0.99
PPP4R1-211ENST00000578875 ARHGAP29Q52LW3 1261 aa8.84□□□□□ -0.99
PPP4R1-211ENST00000578875 PRR16Q569H4 304 aa8.84□□□□□ -0.99
PPP4R1-211ENST00000578875 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.84□□□□□ -0.99
PPP4R1-211ENST00000578875 ANO5Q75V66 913 aa8.84□□□□□ -0.99
PPP4R1-211ENST00000578875 TTC30AQ86WT1 665 aa8.84□□□□□ -0.99
PPP4R1-211ENST00000578875 TCEAL8Q8IYN2 117 aa8.84□□□□□ -0.99
PPP4R1-211ENST00000578875 ZNF654Q8IZM8 581 aa8.84□□□□□ -0.99
PPP4R1-211ENST00000578875 CTCFLQ8NI51 663 aaPredicted RBP8.84□□□□□ -0.99
PPP4R1-211ENST00000578875 SPATA18Q8TC71 538 aa8.84□□□□□ -0.99
PPP4R1-211ENST00000578875 DDX27Q96GQ7 796 aaKnown RBP8.84□□□□□ -0.99
PPP4R1-211ENST00000578875 EBF3Q9H4W6 596 aa8.84□□□□□ -0.99
PPP4R1-211ENST00000578875 HPS4Q9NQG7 708 aa8.84□□□□□ -0.99
PPP4R1-211ENST00000578875 PILRBQ9UKJ0 227 aa8.84□□□□□ -0.99
PPP4R1-211ENST00000578875 CIZ1Q9ULV3 898 aaPredicted RBP8.84□□□□□ -0.99
PPP4R1-211ENST00000578875 SLC6A14Q9UN76 642 aa8.84□□□□□ -0.99
PPP4R1-211ENST00000578875 BACE2Q9Y5Z0 518 aa8.84□□□□□ -0.99
PPP4R1-211ENST00000578875 MGAQ8IWI9 3026 aa8.83□□□□□ -1
PPP4R1-211ENST00000578875 SMCO2A6NFE2 343 aa8.83□□□□□ -1
PPP4R1-211ENST00000578875 GOLGA8CPA6NN73 597 aa8.83□□□□□ -1
PPP4R1-211ENST00000578875 WDR64B1ANS9 1081 aa8.83□□□□□ -1
PPP4R1-211ENST00000578875 TNFRSF10BO14763 440 aa8.83□□□□□ -1
PPP4R1-211ENST00000578875 NPTXRO95502 500 aa8.83□□□□□ -1
PPP4R1-211ENST00000578875 PRAMEF12O95522 483 aa8.83□□□□□ -1
PPP4R1-211ENST00000578875 FOSP01100 380 aaPredicted RBP8.83□□□□□ -1
PPP4R1-211ENST00000578875 CYP3A4P08684 503 aa8.83□□□□□ -1
PPP4R1-211ENST00000578875 CALM1P0DP23 149 aa8.83□□□□□ -1
PPP4R1-211ENST00000578875 CALM2P0DP24 149 aa8.83□□□□□ -1
PPP4R1-211ENST00000578875 CALM3P0DP25 149 aa8.83□□□□□ -1
PPP4R1-211ENST00000578875 ARF4P18085 180 aaPredicted RBP8.83□□□□□ -1
PPP4R1-211ENST00000578875 CLK2P49760 499 aaKnown RBP8.83□□□□□ -1
PPP4R1-211ENST00000578875 EPHA5P54756 1037 aa8.83□□□□□ -1
PPP4R1-211ENST00000578875 GFPT1Q06210 699 aaPredicted RBP8.83□□□□□ -1
PPP4R1-211ENST00000578875 LY6DQ14210 128 aa8.83□□□□□ -1
PPP4R1-211ENST00000578875 NBR1Q14596 966 aa8.83□□□□□ -1
PPP4R1-211ENST00000578875 IQCEQ6IPM2 695 aa8.83□□□□□ -1
PPP4R1-211ENST00000578875 RNF149Q8NC42 400 aa8.83□□□□□ -1
PPP4R1-211ENST00000578875 MDGA1Q8NFP4 955 aa8.83□□□□□ -1
PPP4R1-211ENST00000578875 TSTD1Q8NFU3 115 aa8.83□□□□□ -1
PPP4R1-211ENST00000578875 E2F7Q96AV8 911 aa8.83□□□□□ -1
PPP4R1-211ENST00000578875 POLR3CQ9BUI4 534 aaPredicted RBP8.83□□□□□ -1
PPP4R1-211ENST00000578875 UNC45AQ9H3U1 944 aa8.83□□□□□ -1
PPP4R1-211ENST00000578875 CAPN10Q9HC96 672 aa8.83□□□□□ -1
PPP4R1-211ENST00000578875 TOR4AQ9NXH8 423 aa8.83□□□□□ -1
PPP4R1-211ENST00000578875 KCNK4Q9NYG8 393 aa8.83□□□□□ -1
PPP4R1-211ENST00000578875 TCEAL9Q9UHQ7 104 aa8.83□□□□□ -1
PPP4R1-211ENST00000578875 DOPEY2Q9Y3R5 2298 aa8.83□□□□□ -1
PPP4R1-211ENST00000578875 MYO9AB2RTY4 2548 aa8.83□□□□□ -1
PPP4R1-211ENST00000578875 ANKRD17O75179 2603 aaKnown RBP8.83□□□□□ -1
PPP4R1-211ENST00000578875 COL6A6A6NMZ7 2263 aa8.82□□□□□ -1
PPP4R1-211ENST00000578875 ERICH2A1L162 156 aa8.82□□□□□ -1
PPP4R1-211ENST00000578875 DPYSL4O14531 572 aa8.82□□□□□ -1
PPP4R1-211ENST00000578875 CBFA2T3O75081 653 aa8.82□□□□□ -1
PPP4R1-211ENST00000578875 GJB3O75712 270 aa8.82□□□□□ -1
PPP4R1-211ENST00000578875 ARSAP15289 507 aa8.82□□□□□ -1
PPP4R1-211ENST00000578875 NAPAP54920 295 aa8.82□□□□□ -1
PPP4R1-211ENST00000578875 RUNX3Q13761 415 aa8.82□□□□□ -1
PPP4R1-211ENST00000578875 HNRNPDQ14103 355 aaKnown RBP8.82□□□□□ -1
PPP4R1-211ENST00000578875 AMHR2Q16671 573 aa8.82□□□□□ -1
PPP4R1-211ENST00000578875 XKR3Q5GH77 459 aa8.82□□□□□ -1
PPP4R1-211ENST00000578875 SLC8B1Q6J4K2 584 aa8.82□□□□□ -1
PPP4R1-211ENST00000578875 GAREM2Q75VX8 874 aa8.82□□□□□ -1
PPP4R1-211ENST00000578875 LPCAT2Q7L5N7 544 aa8.82□□□□□ -1
PPP4R1-211ENST00000578875 GPR155Q7Z3F1 870 aa8.82□□□□□ -1
PPP4R1-211ENST00000578875 RASSF3Q86WH2 238 aa8.82□□□□□ -1
PPP4R1-211ENST00000578875 NAXDQ8IW45 347 aa8.82□□□□□ -1
PPP4R1-211ENST00000578875 CCDC33Q8N5R6 958 aa8.82□□□□□ -1
PPP4R1-211ENST00000578875 C3orf58Q8NDZ4 430 aa8.82□□□□□ -1
PPP4R1-211ENST00000578875 OLIG1Q8TAK6 271 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms