RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 NUSAP1Q9BXS6 441 aaKnown RBP6.5□□□□□ -1.37
SMG6-219ENST00000575663 THG1LQ9NWX6 298 aaKnown RBP6.5□□□□□ -1.37
SMG6-219ENST00000575663 OBP2AQ9NY56 170 aa6.5□□□□□ -1.37
SMG6-219ENST00000575663 SNTG2Q9NY99 539 aa6.5□□□□□ -1.37
SMG6-219ENST00000575663 GTSE1Q9NYZ3 720 aa6.5□□□□□ -1.37
SMG6-219ENST00000575663 DDX25Q9UHL0 483 aaKnown RBP6.5□□□□□ -1.37
SMG6-219ENST00000575663 TPCN1Q9ULQ1 816 aa6.5□□□□□ -1.37
SMG6-219ENST00000575663 MAFFQ9ULX9 164 aa6.5□□□□□ -1.37
SMG6-219ENST00000575663 MYH9P35579 1960 aaKnown RBP6.49□□□□□ -1.37
SMG6-219ENST00000575663 MTCL1Q9Y4B5 1905 aaKnown RBP6.49□□□□□ -1.37
SMG6-219ENST00000575663 CYP3A7-CYP3A51PA0A087WV96 503 aa6.49□□□□□ -1.37
SMG6-219ENST00000575663 A0A1W2PRU2 124 aa6.49□□□□□ -1.37
SMG6-219ENST00000575663 NRG2O14511 850 aaPredicted RBP6.49□□□□□ -1.37
SMG6-219ENST00000575663 CDX4O14627 284 aaPredicted RBP6.49□□□□□ -1.37
SMG6-219ENST00000575663 SYN3O14994 580 aa6.49□□□□□ -1.37
SMG6-219ENST00000575663 TBX3O15119 743 aa6.49□□□□□ -1.37
SMG6-219ENST00000575663 RNF40O75150 1001 aa6.49□□□□□ -1.37
SMG6-219ENST00000575663 FGF19O95750 216 aa6.49□□□□□ -1.37
SMG6-219ENST00000575663 HMGB1P09429 215 aaKnown RBP6.49□□□□□ -1.37
SMG6-219ENST00000575663 CPB1P15086 417 aa6.49□□□□□ -1.37
SMG6-219ENST00000575663 GJA1P17302 382 aa6.49□□□□□ -1.37
SMG6-219ENST00000575663 CYP3A7P24462 503 aa6.49□□□□□ -1.37
SMG6-219ENST00000575663 CDC27P30260 824 aa6.49□□□□□ -1.37
SMG6-219ENST00000575663 CLCNKBP51801 687 aa6.49□□□□□ -1.37
SMG6-219ENST00000575663 NLRP5P59047 1200 aa6.49□□□□□ -1.37
SMG6-219ENST00000575663 NAB2Q15742 525 aa6.49□□□□□ -1.37
SMG6-219ENST00000575663 ZNF423Q2M1K9 1284 aa6.49□□□□□ -1.37
SMG6-219ENST00000575663 ITPRIPL2Q3MIP1 535 aa6.49□□□□□ -1.37
SMG6-219ENST00000575663 FBXO43Q4G163 708 aa6.49□□□□□ -1.37
SMG6-219ENST00000575663 ARHGAP15Q53QZ3 475 aa6.49□□□□□ -1.37
SMG6-219ENST00000575663 GLRA4Q5JXX5 417 aa6.49□□□□□ -1.37
SMG6-219ENST00000575663 CREB3L3Q68CJ9 461 aa6.49□□□□□ -1.37
SMG6-219ENST00000575663 PMS2CLQ68D20 193 aa6.49□□□□□ -1.37
SMG6-219ENST00000575663 ZNF280DQ6N043 979 aa6.49□□□□□ -1.37
SMG6-219ENST00000575663 PKN3Q6P5Z2 889 aa6.49□□□□□ -1.37
SMG6-219ENST00000575663 PPP4R3CPQ6ZMV5 832 aa6.49□□□□□ -1.37
SMG6-219ENST00000575663 APBB1IPQ7Z5R6 666 aaPredicted RBP6.49□□□□□ -1.37
SMG6-219ENST00000575663 ZBTB8OSQ8IWT0 167 aa6.49□□□□□ -1.37
SMG6-219ENST00000575663 HS6ST3Q8IZP7 471 aa6.49□□□□□ -1.37
SMG6-219ENST00000575663 HDDC3Q8N4P3 179 aa6.49□□□□□ -1.37
SMG6-219ENST00000575663 ZNF579Q8NAF0 562 aaKnown RBP6.49□□□□□ -1.37
SMG6-219ENST00000575663 GLIS3Q8NEA6 775 aa6.49□□□□□ -1.37
SMG6-219ENST00000575663 SHKBP1Q8TBC3 707 aa6.49□□□□□ -1.37
SMG6-219ENST00000575663 BPIFB1Q8TDL5 484 aa6.49□□□□□ -1.37
SMG6-219ENST00000575663 ANP32EQ9BTT0 268 aa6.49□□□□□ -1.37
SMG6-219ENST00000575663 CCDC86Q9H6F5 360 aaKnown RBP6.49□□□□□ -1.37
SMG6-219ENST00000575663 ZSWIM4Q9H7M6 989 aa6.49□□□□□ -1.37
SMG6-219ENST00000575663 AFF4Q9UHB7 1163 aaKnown RBP6.49□□□□□ -1.37
SMG6-219ENST00000575663 EVLQ9UI08 416 aaPredicted RBP6.49□□□□□ -1.37
SMG6-219ENST00000575663 BRPF3Q9ULD4 1205 aa6.49□□□□□ -1.37
SMG6-219ENST00000575663 IGF2RP11717 2491 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 FAM221BA6H8Z2 402 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 LRRIQ4A6NIV6 560 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 EML1O00423 815 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 ADAMTS3O15072 1205 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 DCLK1O15075 740 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 PRPF3O43395 683 aaKnown RBP6.48□□□□□ -1.37
SMG6-219ENST00000575663 MARCH6O60337 910 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 MOSPD3O75425 235 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 SEC24AO95486 1093 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 DRD1P21728 446 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 HOXC13P31276 330 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 ADD1P35611 737 aaKnown RBP6.48□□□□□ -1.37
SMG6-219ENST00000575663 DPP6P42658 865 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 BRCC3P46736 316 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 MCM2P49736 904 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 DGKEP52429 567 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 ATXN3P54252 364 aaPredicted RBP6.48□□□□□ -1.37
SMG6-219ENST00000575663 C19orf57Q0VDD7 668 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 PRPF4BQ13523 1007 aaKnown RBP6.48□□□□□ -1.37
SMG6-219ENST00000575663 HNRNPDQ14103 355 aaKnown RBP6.48□□□□□ -1.37
SMG6-219ENST00000575663 EPHA7Q15375 998 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 UPP1Q16831 310 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 DCAF4L1Q3SXM0 396 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 CTXN3Q4LDR2 81 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 USP39Q53GS9 565 aaKnown RBP6.48□□□□□ -1.37
SMG6-219ENST00000575663 TRIM61Q5EBN2 209 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 TMEM196Q5HYL7 178 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 LMBRD2Q68DH5 695 aaPredicted RBP6.48□□□□□ -1.37
SMG6-219ENST00000575663 NCAPH2Q6IBW4 605 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 SYT13Q7L8C5 426 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 ARID3BQ8IVW6 561 aaPredicted RBP6.48□□□□□ -1.37
SMG6-219ENST00000575663 TSTD1Q8NFU3 115 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 RPLP0P6Q8NHW5 317 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 CCDC26Q8TAB7 109 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 ADAM32Q8TC27 787 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 ASAP3Q8TDY4 903 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 RSPRY1Q96DX4 576 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 ZFYVE19Q96K21 471 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 FAM20AQ96MK3 541 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 GCNAQ96QF7 691 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 RNF26Q9BY78 433 aaPredicted RBP6.48□□□□□ -1.37
SMG6-219ENST00000575663 POLR3FQ9H1D9 316 aaPredicted RBP6.48□□□□□ -1.37
SMG6-219ENST00000575663 C2orf40Q9H1Z8 148 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 PDZD7Q9H5P4 517 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 XPNPEP1Q9NQW7 623 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 TOPORSQ9NS56 1045 aaPredicted RBP6.48□□□□□ -1.37
SMG6-219ENST00000575663 SLC38A7Q9NVC3 462 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 VPS54Q9P1Q0 977 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 CEP72Q9P209 647 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms