RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 RBPJLQ9UBG7 517 aa6.59□□□□□ -1.35
SF3B3-214ENST00000572365 LUC7L2Q9Y383 392 aaKnown RBP6.59□□□□□ -1.35
SF3B3-214ENST00000572365 PCDHGA9Q9Y5G4 932 aaKnown RBP6.59□□□□□ -1.35
SF3B3-214ENST00000572365 PCDHGA8Q9Y5G5 932 aa6.59□□□□□ -1.35
SF3B3-214ENST00000572365 PCDHGA7Q9Y5G6 932 aa6.59□□□□□ -1.35
SF3B3-214ENST00000572365 PCDHGA6Q9Y5G7 932 aa6.59□□□□□ -1.35
SF3B3-214ENST00000572365 PCDHGA3Q9Y5H0 932 aa6.59□□□□□ -1.35
SF3B3-214ENST00000572365 PCDHGA2Q9Y5H1 932 aa6.59□□□□□ -1.35
SF3B3-214ENST00000572365 PPP2R3BQ9Y5P8 575 aa6.59□□□□□ -1.35
SF3B3-214ENST00000572365 PIEZO1Q92508 2521 aa6.59□□□□□ -1.35
SF3B3-214ENST00000572365 PLXNA1Q9UIW2 1896 aa6.59□□□□□ -1.35
SF3B3-214ENST00000572365 MYH3P11055 1940 aa6.58□□□□□ -1.36
SF3B3-214ENST00000572365 MYOCOSA0A1B0GUC4 107 aa6.58□□□□□ -1.36
SF3B3-214ENST00000572365 RFPL1O75677 317 aa6.58□□□□□ -1.36
SF3B3-214ENST00000572365 SNUPNO95149 360 aaKnown RBP6.58□□□□□ -1.36
SF3B3-214ENST00000572365 CCND1P24385 295 aa6.58□□□□□ -1.36
SF3B3-214ENST00000572365 RECQLP46063 649 aaPredicted RBP6.58□□□□□ -1.36
SF3B3-214ENST00000572365 SLC6A3Q01959 620 aa6.58□□□□□ -1.36
SF3B3-214ENST00000572365 ZBTB41Q5SVQ8 909 aa6.58□□□□□ -1.36
SF3B3-214ENST00000572365 SLFN12LQ6IEE8 588 aa6.58□□□□□ -1.36
SF3B3-214ENST00000572365 KIAA1841Q6NSI8 718 aa6.58□□□□□ -1.36
SF3B3-214ENST00000572365 GADL1Q6ZQY3 521 aa6.58□□□□□ -1.36
SF3B3-214ENST00000572365 NOL8Q76FK4 1167 aaKnown RBP6.58□□□□□ -1.36
SF3B3-214ENST00000572365 B3GNT8Q7Z7M8 397 aa6.58□□□□□ -1.36
SF3B3-214ENST00000572365 CHPFQ8IZ52 775 aa6.58□□□□□ -1.36
SF3B3-214ENST00000572365 ANKRD13CQ8N6S4 541 aa6.58□□□□□ -1.36
SF3B3-214ENST00000572365 TGFBRAP1Q8WUH2 860 aa6.58□□□□□ -1.36
SF3B3-214ENST00000572365 SSH1Q8WYL5 1049 aa6.58□□□□□ -1.36
SF3B3-214ENST00000572365 C8orf48Q96LL4 319 aa6.58□□□□□ -1.36
SF3B3-214ENST00000572365 ANO3Q9BYT9 981 aa6.58□□□□□ -1.36
SF3B3-214ENST00000572365 SENP6Q9GZR1 1112 aaPredicted RBP6.58□□□□□ -1.36
SF3B3-214ENST00000572365 CNTD2Q9H8S5 307 aa6.58□□□□□ -1.36
SF3B3-214ENST00000572365 PCDH18Q9HCL0 1135 aa6.58□□□□□ -1.36
SF3B3-214ENST00000572365 LUC7LQ9NQ29 371 aaKnown RBP6.58□□□□□ -1.36
SF3B3-214ENST00000572365 SIRT5Q9NXA8 310 aa6.58□□□□□ -1.36
SF3B3-214ENST00000572365 FAM53CQ9NYF3 392 aa6.58□□□□□ -1.36
SF3B3-214ENST00000572365 ZNF180Q9UJW8 692 aa6.58□□□□□ -1.36
SF3B3-214ENST00000572365 PCDHA5Q9Y5H7 936 aa6.58□□□□□ -1.36
SF3B3-214ENST00000572365 MRFAP1Q9Y605 127 aa6.58□□□□□ -1.36
SF3B3-214ENST00000572365 CHD7Q9P2D1 2997 aa6.58□□□□□ -1.36
SF3B3-214ENST00000572365 CHD9Q3L8U1 2897 aa6.58□□□□□ -1.36
SF3B3-214ENST00000572365 PRSS38A1L453 326 aa6.57□□□□□ -1.36
SF3B3-214ENST00000572365 KLHL33A6NCF5 533 aa6.57□□□□□ -1.36
SF3B3-214ENST00000572365 ATF2P15336 505 aa6.57□□□□□ -1.36
SF3B3-214ENST00000572365 ZSCAN20P17040 1043 aaPredicted RBP6.57□□□□□ -1.36
SF3B3-214ENST00000572365 CYP2B6P20813 491 aa6.57□□□□□ -1.36
SF3B3-214ENST00000572365 IGFBP6P24592 240 aaPredicted RBP6.57□□□□□ -1.36
SF3B3-214ENST00000572365 TCP10Q12799 353 aa6.57□□□□□ -1.36
SF3B3-214ENST00000572365 PPIL2Q13356 520 aa6.57□□□□□ -1.36
SF3B3-214ENST00000572365 PITRM1Q5JRX3 1037 aa6.57□□□□□ -1.36
SF3B3-214ENST00000572365 PRAMEF9Q5VWM5 478 aa6.57□□□□□ -1.36
SF3B3-214ENST00000572365 NXNQ6DKJ4 435 aa6.57□□□□□ -1.36
SF3B3-214ENST00000572365 KCNK18Q7Z418 384 aa6.57□□□□□ -1.36
SF3B3-214ENST00000572365 ANKRD23Q86SG2 305 aa6.57□□□□□ -1.36
SF3B3-214ENST00000572365 CPA6Q8N4T0 437 aa6.57□□□□□ -1.36
SF3B3-214ENST00000572365 CALML6Q8TD86 181 aa6.57□□□□□ -1.36
SF3B3-214ENST00000572365 RELTQ969Z4 430 aa6.57□□□□□ -1.36
SF3B3-214ENST00000572365 ASB2Q96Q27 587 aa6.57□□□□□ -1.36
SF3B3-214ENST00000572365 TMEM209Q96SK2 561 aa6.57□□□□□ -1.36
SF3B3-214ENST00000572365 CDC5LQ99459 802 aaKnown RBP6.57□□□□□ -1.36
SF3B3-214ENST00000572365 DLL4Q9NR61 685 aa6.57□□□□□ -1.36
SF3B3-214ENST00000572365 DNAJC28Q9NX36 388 aa6.57□□□□□ -1.36
SF3B3-214ENST00000572365 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.57□□□□□ -1.36
SF3B3-214ENST00000572365 MBD1Q9UIS9 605 aaPredicted RBP6.57□□□□□ -1.36
SF3B3-214ENST00000572365 TMPRSS11EQ9UL52 423 aa6.57□□□□□ -1.36
SF3B3-214ENST00000572365 NUMBLQ9Y6R0 609 aa6.57□□□□□ -1.36
SF3B3-214ENST00000572365 CACNA1AO00555 2505 aa6.57□□□□□ -1.36
SF3B3-214ENST00000572365 CACNA1GO43497 2377 aa6.57□□□□□ -1.36
SF3B3-214ENST00000572365 TRIOO75962 3097 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 COL1A1P02452 1464 aaPredicted RBP6.56□□□□□ -1.36
SF3B3-214ENST00000572365 SMCHD1A6NHR9 2005 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 PLXNB2O15031 1838 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 TEX51A0A1B0GUA7 166 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 MAFO75444 373 aaPredicted RBP6.56□□□□□ -1.36
SF3B3-214ENST00000572365 PCCAP05165 728 aaPredicted RBP6.56□□□□□ -1.36
SF3B3-214ENST00000572365 CLEC2LP0C7M8 214 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 PFKLP17858 780 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 CCND3P30281 292 aaPredicted RBP6.56□□□□□ -1.36
SF3B3-214ENST00000572365 MC3RP41968 323 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 MTNR1BP49286 362 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 RGS3P49796 1198 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 CDR1P51861 262 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 CTSWP56202 376 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 RIPK4P57078 832 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 MRPS9P82933 396 aaKnown RBP6.56□□□□□ -1.36
SF3B3-214ENST00000572365 TFF2Q03403 129 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 CHRNDQ07001 517 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 ADCY2Q08462 1091 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 ODF1Q14990 250 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 STILQ15468 1287 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 UGT8Q16880 541 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.56□□□□□ -1.36
SF3B3-214ENST00000572365 SKIDA1Q1XH10 827 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 CT83Q5H943 113 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 FAM102BQ5T8I3 360 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 CCDC62Q6P9F0 684 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 LRSAM1Q6UWE0 723 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 UNQ6494/PRO21346Q6UXR6 183 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 TMC5Q6UXY8 1006 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 PRR23BQ6ZRT6 265 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms