RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 LAS1LQ9Y4W2 734 aaKnown RBP7.22□□□□□ -1.25
HERPUD1-208ENST00000563911 GPR45Q9Y5Y3 372 aa7.22□□□□□ -1.25
HERPUD1-208ENST00000563911 CEP290O15078 2479 aa7.22□□□□□ -1.25
HERPUD1-208ENST00000563911 SPTBN5Q9NRC6 3674 aaKnown RBP7.22□□□□□ -1.25
HERPUD1-208ENST00000563911 UNC80Q8N2C7 3258 aa7.21□□□□□ -1.25
HERPUD1-208ENST00000563911 PFKMP08237 780 aa7.21□□□□□ -1.26
HERPUD1-208ENST00000563911 OSMP13725 252 aa7.21□□□□□ -1.26
HERPUD1-208ENST00000563911 MRPS9P82933 396 aaKnown RBP7.21□□□□□ -1.26
HERPUD1-208ENST00000563911 CD83Q01151 205 aa7.21□□□□□ -1.26
HERPUD1-208ENST00000563911 NFATC3Q12968 1075 aa7.21□□□□□ -1.26
HERPUD1-208ENST00000563911 WDR72Q3MJ13 1102 aa7.21□□□□□ -1.26
HERPUD1-208ENST00000563911 CCDC152Q4G0S7 254 aa7.21□□□□□ -1.26
HERPUD1-208ENST00000563911 APOBEC3FQ8IUX4 373 aaKnown RBP7.21□□□□□ -1.26
HERPUD1-208ENST00000563911 ANKRD18AQ8IVF6 992 aa7.21□□□□□ -1.26
HERPUD1-208ENST00000563911 CPA6Q8N4T0 437 aa7.21□□□□□ -1.26
HERPUD1-208ENST00000563911 LINC00482Q8N8I6 264 aa7.21□□□□□ -1.26
HERPUD1-208ENST00000563911 C8orf58Q8NAV2 365 aa7.21□□□□□ -1.26
HERPUD1-208ENST00000563911 AUTS2Q8WXX7 1259 aa7.21□□□□□ -1.26
HERPUD1-208ENST00000563911 JADE3Q92613 823 aa7.21□□□□□ -1.26
HERPUD1-208ENST00000563911 OPTNQ96CV9 577 aa7.21□□□□□ -1.26
HERPUD1-208ENST00000563911 RHOBTB2Q9BYZ6 727 aa7.21□□□□□ -1.26
HERPUD1-208ENST00000563911 COA1Q9GZY4 146 aa7.21□□□□□ -1.26
HERPUD1-208ENST00000563911 PRDM12Q9H4Q4 367 aa7.21□□□□□ -1.26
HERPUD1-208ENST00000563911 CD209Q9NNX6 404 aa7.21□□□□□ -1.26
HERPUD1-208ENST00000563911 KCND1Q9NSA2 647 aa7.21□□□□□ -1.26
HERPUD1-208ENST00000563911 FTSJ1Q9UET6 329 aa7.21□□□□□ -1.26
HERPUD1-208ENST00000563911 DPP7Q9UHL4 492 aa7.21□□□□□ -1.26
HERPUD1-208ENST00000563911 TMPRSS11EQ9UL52 423 aa7.21□□□□□ -1.26
HERPUD1-208ENST00000563911 DENND2AQ9ULE3 1009 aa7.21□□□□□ -1.26
HERPUD1-208ENST00000563911 ANKRD6Q9Y2G4 727 aa7.21□□□□□ -1.26
HERPUD1-208ENST00000563911 IRAK3Q9Y616 596 aa7.21□□□□□ -1.26
HERPUD1-208ENST00000563911 PMF1-BGLAPU3KQ54 211 aa7.21□□□□□ -1.26
HERPUD1-208ENST00000563911 VCANP13611 3396 aa7.2□□□□□ -1.26
HERPUD1-208ENST00000563911 ETV2O00321 342 aaPredicted RBP7.2□□□□□ -1.26
HERPUD1-208ENST00000563911 TAF5LO75529 589 aa7.2□□□□□ -1.26
HERPUD1-208ENST00000563911 CYP7B1O75881 506 aa7.2□□□□□ -1.26
HERPUD1-208ENST00000563911 ZNF853P0CG23 659 aa7.2□□□□□ -1.26
HERPUD1-208ENST00000563911 AGXTP21549 392 aa7.2□□□□□ -1.26
HERPUD1-208ENST00000563911 NF2P35240 595 aa7.2□□□□□ -1.26
HERPUD1-208ENST00000563911 MTNR1BP49286 362 aa7.2□□□□□ -1.26
HERPUD1-208ENST00000563911 CTSWP56202 376 aa7.2□□□□□ -1.26
HERPUD1-208ENST00000563911 CDK17Q00537 523 aa7.2□□□□□ -1.26
HERPUD1-208ENST00000563911 TRIM25Q14258 630 aaKnown RBP7.2□□□□□ -1.26
HERPUD1-208ENST00000563911 RTP5Q14D33 572 aa7.2□□□□□ -1.26
HERPUD1-208ENST00000563911 STILQ15468 1287 aa7.2□□□□□ -1.26
HERPUD1-208ENST00000563911 SLC4A8Q2Y0W8 1093 aa7.2□□□□□ -1.26
HERPUD1-208ENST00000563911 SLC9C1Q4G0N8 1177 aa7.2□□□□□ -1.26
HERPUD1-208ENST00000563911 CCDC181Q5TID7 509 aa7.2□□□□□ -1.26
HERPUD1-208ENST00000563911 KANK2Q63ZY3 851 aa7.2□□□□□ -1.26
HERPUD1-208ENST00000563911 SYDE1Q6ZW31 735 aaPredicted RBP7.2□□□□□ -1.26
HERPUD1-208ENST00000563911 CXXC5Q7LFL8 322 aaKnown RBP7.2□□□□□ -1.26
HERPUD1-208ENST00000563911 KCNK18Q7Z418 384 aa7.2□□□□□ -1.26
HERPUD1-208ENST00000563911 MYO1HQ8N1T3 1032 aa7.2□□□□□ -1.26
HERPUD1-208ENST00000563911 CCDC191Q8NCU4 936 aa7.2□□□□□ -1.26
HERPUD1-208ENST00000563911 RSAD2Q8WXG1 361 aa7.2□□□□□ -1.26
HERPUD1-208ENST00000563911 SIGLEC10Q96LC7 697 aa7.2□□□□□ -1.26
HERPUD1-208ENST00000563911 TEKT5Q96M29 485 aa7.2□□□□□ -1.26
HERPUD1-208ENST00000563911 SLC2A13Q96QE2 648 aa7.2□□□□□ -1.26
HERPUD1-208ENST00000563911 NOL10Q9BSC4 688 aaKnown RBP7.2□□□□□ -1.26
HERPUD1-208ENST00000563911 HYPKQ9NX55 129 aa7.2□□□□□ -1.26
HERPUD1-208ENST00000563911 KCMF1Q9P0J7 381 aa7.2□□□□□ -1.26
HERPUD1-208ENST00000563911 PRSS50Q9UI38 385 aa7.2□□□□□ -1.26
HERPUD1-208ENST00000563911 OTOFQ9HC10 1997 aa7.2□□□□□ -1.26
HERPUD1-208ENST00000563911 ZNF804BA4D1E1 1349 aa7.2□□□□□ -1.26
HERPUD1-208ENST00000563911 MAPK8IP3Q9UPT6 1336 aa7.2□□□□□ -1.26
HERPUD1-208ENST00000563911 OPHN1O60890 802 aa7.19□□□□□ -1.26
HERPUD1-208ENST00000563911 IL33O95760 270 aa7.19□□□□□ -1.26
HERPUD1-208ENST00000563911 PF4V1P10720 104 aa7.19□□□□□ -1.26
HERPUD1-208ENST00000563911 ADCY8P40145 1251 aa7.19□□□□□ -1.26
HERPUD1-208ENST00000563911 PPARAQ07869 468 aa7.19□□□□□ -1.26
HERPUD1-208ENST00000563911 MAP3K12Q12852 859 aa7.19□□□□□ -1.26
HERPUD1-208ENST00000563911 DLGAP5Q15398 846 aa7.19□□□□□ -1.26
HERPUD1-208ENST00000563911 G2E3Q7L622 706 aa7.19□□□□□ -1.26
HERPUD1-208ENST00000563911 OTOP2Q7RTS6 562 aa7.19□□□□□ -1.26
HERPUD1-208ENST00000563911 TMEFF1Q8IYR6 380 aa7.19□□□□□ -1.26
HERPUD1-208ENST00000563911 TSPYL6Q8N831 410 aa7.19□□□□□ -1.26
HERPUD1-208ENST00000563911 OR14C36Q8NHC7 312 aa7.19□□□□□ -1.26
HERPUD1-208ENST00000563911 GAB3Q8WWW8 586 aa7.19□□□□□ -1.26
HERPUD1-208ENST00000563911 SSH1Q8WYL5 1049 aa7.19□□□□□ -1.26
HERPUD1-208ENST00000563911 CCDC136Q96JN2 1154 aa7.19□□□□□ -1.26
HERPUD1-208ENST00000563911 TCF7L1Q9HCS4 588 aa7.19□□□□□ -1.26
HERPUD1-208ENST00000563911 CWC25Q9NXE8 425 aaPredicted RBP7.19□□□□□ -1.26
HERPUD1-208ENST00000563911 MAGEL2Q9UJ55 1249 aa7.19□□□□□ -1.26
HERPUD1-208ENST00000563911 SYNPO2Q9UMS6 1093 aa7.19□□□□□ -1.26
HERPUD1-208ENST00000563911 GIT1Q9Y2X7 761 aa7.19□□□□□ -1.26
HERPUD1-208ENST00000563911 SPEF2Q9C093 1822 aa7.19□□□□□ -1.26
HERPUD1-208ENST00000563911 A0A0A6YYJ9 748 aa7.18□□□□□ -1.26
HERPUD1-208ENST00000563911 CCL15-CCL14A0A0B4J2E2 113 aa7.18□□□□□ -1.26
HERPUD1-208ENST00000563911 BTBD19C9JJ37 291 aa7.18□□□□□ -1.26
HERPUD1-208ENST00000563911 H0Y858 1186 aa7.18□□□□□ -1.26
HERPUD1-208ENST00000563911 RFPL1O75677 317 aa7.18□□□□□ -1.26
HERPUD1-208ENST00000563911 PLA2G1BP04054 148 aaKnown RBP7.18□□□□□ -1.26
HERPUD1-208ENST00000563911 HOXB7P09629 217 aa7.18□□□□□ -1.26
HERPUD1-208ENST00000563911 SLC5A3P53794 718 aa7.18□□□□□ -1.26
HERPUD1-208ENST00000563911 CCT2P78371 535 aaKnown RBP7.18□□□□□ -1.26
HERPUD1-208ENST00000563911 VGLL4Q14135 290 aa7.18□□□□□ -1.26
HERPUD1-208ENST00000563911 SPIDRQ14159 915 aa7.18□□□□□ -1.26
HERPUD1-208ENST00000563911 CCL15Q16663 113 aa7.18□□□□□ -1.26
HERPUD1-208ENST00000563911 MUM1Q2TAK8 710 aa7.18□□□□□ -1.26
HERPUD1-208ENST00000563911 TMEM240Q5SV17 173 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms