RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 DPYDQ12882 1025 aa17.06■□□□□ 0.32
USB1-208ENST00000563207 TDGQ13569 410 aa17.06■□□□□ 0.32
USB1-208ENST00000563207 DCAF4L1Q3SXM0 396 aa17.06■□□□□ 0.32
USB1-208ENST00000563207 CWF19L1Q69YN2 538 aaKnown RBP17.06■□□□□ 0.32
USB1-208ENST00000563207 ALKAL1Q6UXT8 129 aa17.06■□□□□ 0.32
USB1-208ENST00000563207 ZPBP2Q6X784 338 aa17.06■□□□□ 0.32
USB1-208ENST00000563207 GRAMD1CQ8IYS0 662 aa17.06■□□□□ 0.32
USB1-208ENST00000563207 PIK3R5Q8WYR1 880 aa17.06■□□□□ 0.32
USB1-208ENST00000563207 C18orf25Q96B23 403 aaPredicted RBP17.06■□□□□ 0.32
USB1-208ENST00000563207 RPP25Q9BUL9 199 aaKnown RBP17.06■□□□□ 0.32
USB1-208ENST00000563207 STRA6Q9BX79 667 aa17.06■□□□□ 0.32
USB1-208ENST00000563207 GTPBP4Q9BZE4 634 aaKnown RBP17.06■□□□□ 0.32
USB1-208ENST00000563207 PRKD2Q9BZL6 878 aa17.06■□□□□ 0.32
USB1-208ENST00000563207 HAPLN2Q9GZV7 340 aa17.06■□□□□ 0.32
USB1-208ENST00000563207 PLEKHA4Q9H4M7 779 aa17.06■□□□□ 0.32
USB1-208ENST00000563207 PIDD1Q9HB75 910 aa17.06■□□□□ 0.32
USB1-208ENST00000563207 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.06■□□□□ 0.32
USB1-208ENST00000563207 FBXW11Q9UKB1 542 aa17.06■□□□□ 0.32
USB1-208ENST00000563207 NOTCH4Q99466 2003 aa17.06■□□□□ 0.32
USB1-208ENST00000563207 VPS13AQ96RL7 3174 aa17.05■□□□□ 0.32
USB1-208ENST00000563207 MYO15AQ9UKN7 3530 aa17.05■□□□□ 0.32
USB1-208ENST00000563207 EIF3DO15371 548 aaKnown RBP eCLIP17.05■□□□□ 0.32
USB1-208ENST00000563207 KLRC4O43908 158 aa17.05■□□□□ 0.32
USB1-208ENST00000563207 PPP1R37O75864 691 aa17.05■□□□□ 0.32
USB1-208ENST00000563207 B3GAT3O94766 335 aa17.05■□□□□ 0.32
USB1-208ENST00000563207 SMC2O95347 1197 aa17.05■□□□□ 0.32
USB1-208ENST00000563207 GCNT3O95395 438 aa17.05■□□□□ 0.32
USB1-208ENST00000563207 RPN1P04843 607 aaKnown RBP17.05■□□□□ 0.32
USB1-208ENST00000563207 CFHP08603 1231 aa17.05■□□□□ 0.32
USB1-208ENST00000563207 PROZP22891 400 aa17.05■□□□□ 0.32
USB1-208ENST00000563207 NMT1P30419 496 aaKnown RBP17.05■□□□□ 0.32
USB1-208ENST00000563207 OR1D2P34982 312 aa17.05■□□□□ 0.32
USB1-208ENST00000563207 GRM5P41594 1212 aa17.05■□□□□ 0.32
USB1-208ENST00000563207 PTPN5P54829 565 aa17.05■□□□□ 0.32
USB1-208ENST00000563207 KCNB1Q14721 858 aa17.05■□□□□ 0.32
USB1-208ENST00000563207 UPP1Q16831 310 aa17.05■□□□□ 0.32
USB1-208ENST00000563207 ZNF568Q3ZCX4 644 aa17.05■□□□□ 0.32
USB1-208ENST00000563207 FAM26FQ5R3K3 315 aa17.05■□□□□ 0.32
USB1-208ENST00000563207 GET4Q7L5D6 327 aaPredicted RBP17.05■□□□□ 0.32
USB1-208ENST00000563207 GRASPQ7Z6J2 395 aaPredicted RBP17.05■□□□□ 0.32
USB1-208ENST00000563207 MAP4K3Q8IVH8 894 aa17.05■□□□□ 0.32
USB1-208ENST00000563207 GSDMAQ96QA5 445 aa17.05■□□□□ 0.32
USB1-208ENST00000563207 EXOC1Q9NV70 894 aa17.05■□□□□ 0.32
USB1-208ENST00000563207 RMND1Q9NWS8 449 aa17.05■□□□□ 0.32
USB1-208ENST00000563207 EXOC7Q9UPT5 735 aa17.05■□□□□ 0.32
USB1-208ENST00000563207 PDCD11Q14690 1871 aaKnown RBP17.04■□□□□ 0.32
USB1-208ENST00000563207 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.04■□□□□ 0.32
USB1-208ENST00000563207 CCL16O15467 120 aa17.04■□□□□ 0.32
USB1-208ENST00000563207 RHOBTB3O94955 611 aa17.04■□□□□ 0.32
USB1-208ENST00000563207 PIGRP01833 764 aa17.04■□□□□ 0.32
USB1-208ENST00000563207 FGFR3P22607 806 aa17.04■□□□□ 0.32
USB1-208ENST00000563207 CASP1P29466 404 aa17.04■□□□□ 0.32
USB1-208ENST00000563207 XKR4Q5GH76 650 aa17.04■□□□□ 0.32
USB1-208ENST00000563207 L1TD1Q5T7N2 865 aaKnown RBP17.04■□□□□ 0.32
USB1-208ENST00000563207 DCLRE1AQ6PJP8 1040 aa17.04■□□□□ 0.32
USB1-208ENST00000563207 GPR65Q8IYL9 337 aa17.04■□□□□ 0.32
USB1-208ENST00000563207 SLC44A3Q8N4M1 653 aa17.04■□□□□ 0.32
USB1-208ENST00000563207 FLCNQ8NFG4 579 aa17.04■□□□□ 0.32
USB1-208ENST00000563207 HDAC7Q8WUI4 952 aa17.04■□□□□ 0.32
USB1-208ENST00000563207 DDX27Q96GQ7 796 aaKnown RBP17.04■□□□□ 0.32
USB1-208ENST00000563207 ACCSQ96QU6 501 aa17.04■□□□□ 0.32
USB1-208ENST00000563207 TMEM206Q9H813 350 aa17.04■□□□□ 0.32
USB1-208ENST00000563207 HCFC1R1Q9NWW0 138 aa17.04■□□□□ 0.32
USB1-208ENST00000563207 ZDHHC7Q9NXF8 308 aa17.04■□□□□ 0.32
USB1-208ENST00000563207 DUSP12Q9UNI6 340 aa17.04■□□□□ 0.32
USB1-208ENST00000563207 CITO14578 2027 aa17.04■□□□□ 0.32
USB1-208ENST00000563207 UBE4BO95155 1302 aa17.03■□□□□ 0.32
USB1-208ENST00000563207 KRBA1A5PL33 1030 aa17.03■□□□□ 0.32
USB1-208ENST00000563207 TOM1L1O75674 476 aa17.03■□□□□ 0.32
USB1-208ENST00000563207 C8AP07357 584 aa17.03■□□□□ 0.32
USB1-208ENST00000563207 PTMSP20962 102 aa17.03■□□□□ 0.32
USB1-208ENST00000563207 SPAG1Q07617 926 aa17.03■□□□□ 0.32
USB1-208ENST00000563207 KMT5BQ4FZB7 885 aa17.03■□□□□ 0.32
USB1-208ENST00000563207 ASTLQ6HA08 431 aaPredicted RBP17.03■□□□□ 0.32
USB1-208ENST00000563207 POTEHQ6S545 545 aa17.03■□□□□ 0.32
USB1-208ENST00000563207 SIX5Q8N196 739 aa17.03■□□□□ 0.32
USB1-208ENST00000563207 SPATA20Q8TB22 786 aa17.03■□□□□ 0.32
USB1-208ENST00000563207 BICD1Q96G01 975 aa17.03■□□□□ 0.32
USB1-208ENST00000563207 TCHPQ9BT92 498 aa17.03■□□□□ 0.32
USB1-208ENST00000563207 RHOBTB2Q9BYZ6 727 aa17.03■□□□□ 0.32
USB1-208ENST00000563207 TBC1D7Q9P0N9 293 aa17.03■□□□□ 0.32
USB1-208ENST00000563207 EPS15L1Q9UBC2 864 aa17.03■□□□□ 0.32
USB1-208ENST00000563207 CDY1Q9Y6F8 540 aa17.03■□□□□ 0.32
USB1-208ENST00000563207 HNRNPDLO14979 420 aaKnown RBP17.02■□□□□ 0.32
USB1-208ENST00000563207 GALR2O43603 387 aaPredicted RBP17.02■□□□□ 0.32
USB1-208ENST00000563207 KIF20AO95235 890 aa17.02■□□□□ 0.32
USB1-208ENST00000563207 MBD3O95983 291 aa17.02■□□□□ 0.32
USB1-208ENST00000563207 PRR29P0C7W0 189 aa17.02■□□□□ 0.32
USB1-208ENST00000563207 LAMP2P13473 410 aa17.02■□□□□ 0.32
USB1-208ENST00000563207 LIG4P49917 911 aa17.02■□□□□ 0.32
USB1-208ENST00000563207 PNOCQ13519 176 aa17.02■□□□□ 0.32
USB1-208ENST00000563207 SLC10A6Q3KNW5 377 aa17.02■□□□□ 0.32
USB1-208ENST00000563207 ZC2HC1CQ53FD0 456 aaPredicted RBP17.02■□□□□ 0.32
USB1-208ENST00000563207 SLFN12LQ6IEE8 588 aa17.02■□□□□ 0.32
USB1-208ENST00000563207 MPZL3Q6UWV2 235 aa17.02■□□□□ 0.32
USB1-208ENST00000563207 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.02■□□□□ 0.32
USB1-208ENST00000563207 EPM2AIP1Q7L775 607 aaPredicted RBP17.02■□□□□ 0.32
USB1-208ENST00000563207 ITFG1Q8TB96 612 aa17.02■□□□□ 0.32
USB1-208ENST00000563207 SLC7A14Q8TBB6 771 aa17.02■□□□□ 0.32
USB1-208ENST00000563207 ZNF507Q8TCN5 953 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms