RNA–Protein interactions for RNA: ENST00000561668.5

PKD1-223, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-223ENST00000561668 SPATA20Q8TB22 786 aa20.3■□□□□ 0.84
PKD1-223ENST00000561668 HPS3Q969F9 1004 aa20.3■□□□□ 0.84
PKD1-223ENST00000561668 CLSTN3Q9BQT9 956 aa20.3■□□□□ 0.84
PKD1-223ENST00000561668 PIDD1Q9HB75 910 aa20.3■□□□□ 0.84
PKD1-223ENST00000561668 UBE4BO95155 1302 aa20.29■□□□□ 0.84
PKD1-223ENST00000561668 I3L4J1 428 aa20.29■□□□□ 0.84
PKD1-223ENST00000561668 DCXO43602 365 aa20.29■□□□□ 0.84
PKD1-223ENST00000561668 RHOBTB3O94955 611 aa20.29■□□□□ 0.84
PKD1-223ENST00000561668 LDHAP00338 332 aaKnown RBP20.29■□□□□ 0.84
PKD1-223ENST00000561668 KCNB1Q14721 858 aa20.29■□□□□ 0.84
PKD1-223ENST00000561668 ZBTB41Q5SVQ8 909 aa20.29■□□□□ 0.84
PKD1-223ENST00000561668 KREMEN2Q8NCW0 462 aa20.29■□□□□ 0.84
PKD1-223ENST00000561668 C3orf58Q8NDZ4 430 aa20.29■□□□□ 0.84
PKD1-223ENST00000561668 BEST2Q8NFU1 509 aa20.29■□□□□ 0.84
PKD1-223ENST00000561668 POMKQ9H5K3 350 aa20.29■□□□□ 0.84
PKD1-223ENST00000561668 ASB7Q9H672 318 aa20.29■□□□□ 0.84
PKD1-223ENST00000561668 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.28■□□□□ 0.84
PKD1-223ENST00000561668 H7C4K7 107 aa20.28■□□□□ 0.84
PKD1-223ENST00000561668 SYN3O14994 580 aa20.28■□□□□ 0.84
PKD1-223ENST00000561668 PRPF6O94906 941 aaKnown RBP20.28■□□□□ 0.84
PKD1-223ENST00000561668 PRR29P0C7W0 189 aa20.28■□□□□ 0.84
PKD1-223ENST00000561668 GARTP22102 1010 aa20.28■□□□□ 0.84
PKD1-223ENST00000561668 SP100P23497 879 aaPredicted RBP20.28■□□□□ 0.84
PKD1-223ENST00000561668 TKTP29401 623 aaKnown RBP20.28■□□□□ 0.84
PKD1-223ENST00000561668 OR1D2P34982 312 aa20.28■□□□□ 0.84
PKD1-223ENST00000561668 UBE2HP62256 183 aa20.28■□□□□ 0.84
PKD1-223ENST00000561668 SNRPFP62306 86 aaKnown RBP20.28■□□□□ 0.84
PKD1-223ENST00000561668 ZBTB6Q15916 424 aa20.28■□□□□ 0.84
PKD1-223ENST00000561668 KMT5BQ4FZB7 885 aa20.28■□□□□ 0.84
PKD1-223ENST00000561668 LIN9Q5TKA1 542 aa20.28■□□□□ 0.84
PKD1-223ENST00000561668 LILRA6Q6PI73 481 aa20.28■□□□□ 0.84
PKD1-223ENST00000561668 CD300LGQ6UXG3 332 aa20.28■□□□□ 0.84
PKD1-223ENST00000561668 APPL2Q8NEU8 664 aa20.28■□□□□ 0.84
PKD1-223ENST00000561668 CMASQ8NFW8 434 aaPredicted RBP20.28■□□□□ 0.84
PKD1-223ENST00000561668 TMEM174Q8WUU8 243 aa20.28■□□□□ 0.84
PKD1-223ENST00000561668 SCFD1Q8WVM8 642 aa20.28■□□□□ 0.84
PKD1-223ENST00000561668 KHSRPQ92945 711 aaKnown RBP eCLIP20.28■□□□□ 0.84
PKD1-223ENST00000561668 CCDC34Q96HJ3 373 aa20.28■□□□□ 0.84
PKD1-223ENST00000561668 TUBGCP4Q9UGJ1 667 aa20.28■□□□□ 0.84
PKD1-223ENST00000561668 DERAQ9Y315 318 aa20.28■□□□□ 0.84
PKD1-223ENST00000561668 BACE2Q9Y5Z0 518 aa20.28■□□□□ 0.84
PKD1-223ENST00000561668 TISP43B9A030 160 aa20.27■□□□□ 0.84
PKD1-223ENST00000561668 IL18RAPO95256 599 aa20.27■□□□□ 0.84
PKD1-223ENST00000561668 RPN1P04843 607 aaKnown RBP20.27■□□□□ 0.84
PKD1-223ENST00000561668 IGFBP6P24592 240 aaPredicted RBP20.27■□□□□ 0.84
PKD1-223ENST00000561668 STK4Q13043 487 aa20.27■□□□□ 0.84
PKD1-223ENST00000561668 TMEM132DQ14C87 1099 aa20.27■□□□□ 0.84
PKD1-223ENST00000561668 JADE1Q6IE81 842 aa20.27■□□□□ 0.84
PKD1-223ENST00000561668 PLCD3Q8N3E9 789 aa20.27■□□□□ 0.84
PKD1-223ENST00000561668 NOC3LQ8WTT2 800 aaKnown RBP20.27■□□□□ 0.84
PKD1-223ENST00000561668 ACSF2Q96CM8 615 aaPredicted RBP20.27■□□□□ 0.84
PKD1-223ENST00000561668 IKZF4Q9H2S9 585 aa20.27■□□□□ 0.84
PKD1-223ENST00000561668 ZDHHC7Q9NXF8 308 aa20.27■□□□□ 0.84
PKD1-223ENST00000561668 MTRRQ9UBK8 725 aa20.27■□□□□ 0.84
PKD1-223ENST00000561668 CDH22Q9UJ99 828 aa20.27■□□□□ 0.84
PKD1-223ENST00000561668 CDY1Q9Y6F8 540 aa20.27■□□□□ 0.84
PKD1-223ENST00000561668 KIAA0391O15091 583 aaKnown RBP20.26■□□□□ 0.83
PKD1-223ENST00000561668 TGFB1I1O43294 461 aa20.26■□□□□ 0.83
PKD1-223ENST00000561668 PAX3P23760 479 aa20.26■□□□□ 0.83
PKD1-223ENST00000561668 LRPAP1P30533 357 aa20.26■□□□□ 0.83
PKD1-223ENST00000561668 RAB33AQ14088 237 aa20.26■□□□□ 0.83
PKD1-223ENST00000561668 TMEM31Q5JXX7 168 aa20.26■□□□□ 0.83
PKD1-223ENST00000561668 VARS2Q5ST30 1063 aaKnown RBP20.26■□□□□ 0.83
PKD1-223ENST00000561668 SPATA1Q5VX52 437 aa20.26■□□□□ 0.83
PKD1-223ENST00000561668 CRELD2Q6UXH1 353 aaPredicted RBP20.26■□□□□ 0.83
PKD1-223ENST00000561668 DSTYKQ6XUX3 929 aa20.26■□□□□ 0.83
PKD1-223ENST00000561668 CCDC149Q6ZUS6 474 aa20.26■□□□□ 0.83
PKD1-223ENST00000561668 KIAA0895Q8NCT3 520 aa20.26■□□□□ 0.83
PKD1-223ENST00000561668 SMG7Q92540 1137 aaKnown RBP20.26■□□□□ 0.83
PKD1-223ENST00000561668 SUSD3Q96L08 255 aa20.26■□□□□ 0.83
PKD1-223ENST00000561668 FAM213AQ9BRX8 229 aa20.26■□□□□ 0.83
PKD1-223ENST00000561668 CGNQ9P2M7 1197 aaKnown RBP20.26■□□□□ 0.83
PKD1-223ENST00000561668 MUTYHQ9UIF7 546 aa20.26■□□□□ 0.83
PKD1-223ENST00000561668 USTQ9Y2C2 406 aa20.26■□□□□ 0.83
PKD1-223ENST00000561668 RFPL2O75678 378 aa20.25■□□□□ 0.83
PKD1-223ENST00000561668 ZMYND10O75800 440 aa20.25■□□□□ 0.83
PKD1-223ENST00000561668 ELF1P32519 619 aa20.25■□□□□ 0.83
PKD1-223ENST00000561668 UVSSAQ2YD98 709 aa20.25■□□□□ 0.83
PKD1-223ENST00000561668 PPM1LQ5SGD2 360 aa20.25■□□□□ 0.83
PKD1-223ENST00000561668 ARMCX5Q6P1M9 558 aa20.25■□□□□ 0.83
PKD1-223ENST00000561668 OTOP3Q7RTS5 596 aa20.25■□□□□ 0.83
PKD1-223ENST00000561668 USP37Q86T82 979 aa20.25■□□□□ 0.83
PKD1-223ENST00000561668 C12orf56Q8IXR9 622 aa20.25■□□□□ 0.83
PKD1-223ENST00000561668 TDRD5Q8NAT2 981 aaKnown RBP20.25■□□□□ 0.83
PKD1-223ENST00000561668 PRKD2Q9BZL6 878 aa20.25■□□□□ 0.83
PKD1-223ENST00000561668 SLC39A2Q9NP94 309 aa20.25■□□□□ 0.83
PKD1-223ENST00000561668 EXOC1Q9NV70 894 aa20.25■□□□□ 0.83
PKD1-223ENST00000561668 C2CD2Q9Y426 696 aa20.25■□□□□ 0.83
PKD1-223ENST00000561668 ARPP19P56211 112 aa20.24■□□□□ 0.83
PKD1-223ENST00000561668 KNOP1Q1ED39 458 aaKnown RBP20.24■□□□□ 0.83
PKD1-223ENST00000561668 CTXN3Q4LDR2 81 aa20.24■□□□□ 0.83
PKD1-223ENST00000561668 RTL10Q7L3V2 364 aa20.24■□□□□ 0.83
PKD1-223ENST00000561668 NT5DC4Q86YG4 428 aa20.24■□□□□ 0.83
PKD1-223ENST00000561668 CACTINQ8WUQ7 758 aaKnown RBP20.24■□□□□ 0.83
PKD1-223ENST00000561668 SAAL1Q96ER3 474 aa20.24■□□□□ 0.83
PKD1-223ENST00000561668 GSDMAQ96QA5 445 aa20.24■□□□□ 0.83
PKD1-223ENST00000561668 RHOBTB2Q9BYZ6 727 aa20.24■□□□□ 0.83
PKD1-223ENST00000561668 PCIF1Q9H4Z3 704 aa20.24■□□□□ 0.83
PKD1-223ENST00000561668 DPP3Q9NY33 737 aa20.24■□□□□ 0.83
PKD1-223ENST00000561668 PCDHB8Q9UN66 801 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 411.6 ms