RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 PIK3R5Q8WYR1 880 aa13.11□□□□□ -0.31
USP8-212ENST00000560730 CASP10Q92851 521 aa13.11□□□□□ -0.31
USP8-212ENST00000560730 TSPAN18Q96SJ8 248 aa13.11□□□□□ -0.31
USP8-212ENST00000560730 PDE11AQ9HCR9 933 aa13.11□□□□□ -0.31
USP8-212ENST00000560730 RBAKQ9NYW8 714 aaPredicted RBP13.11□□□□□ -0.31
USP8-212ENST00000560730 FNIP2Q9P278 1114 aa13.11□□□□□ -0.31
USP8-212ENST00000560730 SSX2IPQ9Y2D8 614 aa13.11□□□□□ -0.31
USP8-212ENST00000560730 DERAQ9Y315 318 aa13.11□□□□□ -0.31
USP8-212ENST00000560730 NUB1Q9Y5A7 615 aa13.11□□□□□ -0.31
USP8-212ENST00000560730 C2orf16Q68DN1 1984 aa13.11□□□□□ -0.31
USP8-212ENST00000560730 TRAPPC3O43617 180 aa13.1□□□□□ -0.31
USP8-212ENST00000560730 IL18RAPO95256 599 aa13.1□□□□□ -0.31
USP8-212ENST00000560730 ADH1AP07327 375 aa13.1□□□□□ -0.31
USP8-212ENST00000560730 MCM4P33991 863 aa13.1□□□□□ -0.31
USP8-212ENST00000560730 CYP2J2P51589 502 aa13.1□□□□□ -0.31
USP8-212ENST00000560730 SMAD4Q13485 552 aaKnown RBP13.1□□□□□ -0.31
USP8-212ENST00000560730 C9orf57Q5W0N0 161 aa13.1□□□□□ -0.31
USP8-212ENST00000560730 PPFIBP1Q86W92 1011 aa13.1□□□□□ -0.31
USP8-212ENST00000560730 RDH13Q8NBN7 331 aa13.1□□□□□ -0.31
USP8-212ENST00000560730 SUSD3Q96L08 255 aa13.1□□□□□ -0.31
USP8-212ENST00000560730 FBXL18Q96ME1 805 aa13.1□□□□□ -0.31
USP8-212ENST00000560730 KCTD10Q9H3F6 313 aa13.1□□□□□ -0.31
USP8-212ENST00000560730 TSHZ2Q9NRE2 1034 aa13.1□□□□□ -0.31
USP8-212ENST00000560730 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.1□□□□□ -0.31
USP8-212ENST00000560730 DPP3Q9NY33 737 aa13.1□□□□□ -0.31
USP8-212ENST00000560730 C2CD2Q9Y426 696 aa13.1□□□□□ -0.31
USP8-212ENST00000560730 USP15Q9Y4E8 981 aaPredicted RBP13.1□□□□□ -0.31
USP8-212ENST00000560730 ANO9A1A5B4 782 aa13.09□□□□□ -0.31
USP8-212ENST00000560730 DLL1O00548 723 aa13.09□□□□□ -0.31
USP8-212ENST00000560730 PIRO00625 290 aa13.09□□□□□ -0.31
USP8-212ENST00000560730 KIAA0391O15091 583 aaKnown RBP13.09□□□□□ -0.31
USP8-212ENST00000560730 SPTLC1O15269 473 aa13.09□□□□□ -0.31
USP8-212ENST00000560730 XPOTO43592 962 aaKnown RBP13.09□□□□□ -0.31
USP8-212ENST00000560730 WEE2P0C1S8 567 aa13.09□□□□□ -0.31
USP8-212ENST00000560730 AARSP49588 968 aaKnown RBP eCLIP13.09□□□□□ -0.31
USP8-212ENST00000560730 KCNB1Q14721 858 aa13.09□□□□□ -0.31
USP8-212ENST00000560730 SMAD2Q15796 467 aaKnown RBP13.09□□□□□ -0.31
USP8-212ENST00000560730 PUS10Q3MIT2 529 aaKnown RBP13.09□□□□□ -0.31
USP8-212ENST00000560730 RARS2Q5T160 578 aaKnown RBP13.09□□□□□ -0.31
USP8-212ENST00000560730 LMBRD2Q68DH5 695 aaPredicted RBP13.09□□□□□ -0.31
USP8-212ENST00000560730 LILRA6Q6PI73 481 aa13.09□□□□□ -0.31
USP8-212ENST00000560730 UHRF1Q96T88 793 aaPredicted RBP13.09□□□□□ -0.31
USP8-212ENST00000560730 CD320Q9NPF0 282 aa13.09□□□□□ -0.31
USP8-212ENST00000560730 MTRRQ9UBK8 725 aa13.09□□□□□ -0.31
USP8-212ENST00000560730 MAPK8IP1Q9UQF2 711 aa13.09□□□□□ -0.31
USP8-212ENST00000560730 PTPRJQ12913 1337 aa13.09□□□□□ -0.31
USP8-212ENST00000560730 C5orf42Q9H799 3197 aa13.09□□□□□ -0.31
USP8-212ENST00000560730 ZNF233A6NK53 670 aa13.08□□□□□ -0.32
USP8-212ENST00000560730 M0QZQ0 153 aa13.08□□□□□ -0.32
USP8-212ENST00000560730 TGM5O43548 720 aa13.08□□□□□ -0.32
USP8-212ENST00000560730 SRGAP2BP0DMP2 458 aa13.08□□□□□ -0.32
USP8-212ENST00000560730 HOXB8P17481 243 aaPredicted RBP13.08□□□□□ -0.32
USP8-212ENST00000560730 OR1D2P34982 312 aa13.08□□□□□ -0.32
USP8-212ENST00000560730 LILRA4P59901 499 aa13.08□□□□□ -0.32
USP8-212ENST00000560730 SNRPFP62306 86 aaKnown RBP13.08□□□□□ -0.32
USP8-212ENST00000560730 TFAMQ00059 246 aaKnown RBP13.08□□□□□ -0.32
USP8-212ENST00000560730 VARS2Q5ST30 1063 aaKnown RBP13.08□□□□□ -0.32
USP8-212ENST00000560730 HS2ST1Q7LGA3 356 aa13.08□□□□□ -0.32
USP8-212ENST00000560730 C12orf56Q8IXR9 622 aa13.08□□□□□ -0.32
USP8-212ENST00000560730 SMYD4Q8IYR2 804 aaPredicted RBP13.08□□□□□ -0.32
USP8-212ENST00000560730 XXYLT1Q8NBI6 393 aa13.08□□□□□ -0.32
USP8-212ENST00000560730 SUSD6Q92537 303 aa13.08□□□□□ -0.32
USP8-212ENST00000560730 TIGD1Q96MW7 591 aa13.08□□□□□ -0.32
USP8-212ENST00000560730 MAN1C1Q9NR34 630 aa13.08□□□□□ -0.32
USP8-212ENST00000560730 DMAC2Q9NW81 257 aa13.08□□□□□ -0.32
USP8-212ENST00000560730 PCDHA5Q9Y5H7 936 aa13.08□□□□□ -0.32
USP8-212ENST00000560730 TIMM13Q9Y5L4 95 aaPredicted RBP13.08□□□□□ -0.32
USP8-212ENST00000560730 VCANP13611 3396 aa13.07□□□□□ -0.32
USP8-212ENST00000560730 MYO10Q9HD67 2058 aa13.07□□□□□ -0.32
USP8-212ENST00000560730 SYN3O14994 580 aa13.07□□□□□ -0.32
USP8-212ENST00000560730 TBC1D4O60343 1298 aa13.07□□□□□ -0.32
USP8-212ENST00000560730 GLUD1P00367 558 aa13.07□□□□□ -0.32
USP8-212ENST00000560730 CYP24A1Q07973 514 aa13.07□□□□□ -0.32
USP8-212ENST00000560730 MRPL58Q14197 206 aaKnown RBP13.07□□□□□ -0.32
USP8-212ENST00000560730 SNRNP35Q16560 246 aaKnown RBP13.07□□□□□ -0.32
USP8-212ENST00000560730 TMC5Q6UXY8 1006 aa13.07□□□□□ -0.32
USP8-212ENST00000560730 ANKS3Q6ZW76 656 aa13.07□□□□□ -0.32
USP8-212ENST00000560730 C1orf127Q8N9H9 656 aa13.07□□□□□ -0.32
USP8-212ENST00000560730 OR5B17Q8NGF7 314 aa13.07□□□□□ -0.32
USP8-212ENST00000560730 CXorf38Q8TB03 319 aa13.07□□□□□ -0.32
USP8-212ENST00000560730 SPATA20Q8TB22 786 aa13.07□□□□□ -0.32
USP8-212ENST00000560730 PLEKHO2Q8TD55 490 aa13.07□□□□□ -0.32
USP8-212ENST00000560730 CCDC47Q96A33 483 aaKnown RBP13.07□□□□□ -0.32
USP8-212ENST00000560730 IPO9Q96P70 1041 aaKnown RBP13.07□□□□□ -0.32
USP8-212ENST00000560730 POP1Q99575 1024 aaKnown RBP13.07□□□□□ -0.32
USP8-212ENST00000560730 GZF1Q9H116 711 aaPredicted RBP13.07□□□□□ -0.32
USP8-212ENST00000560730 ADAM7Q9H2U9 754 aa13.07□□□□□ -0.32
USP8-212ENST00000560730 KIAA1586Q9HCI6 787 aa13.07□□□□□ -0.32
USP8-212ENST00000560730 DZANK1Q9NVP4 752 aa13.07□□□□□ -0.32
USP8-212ENST00000560730 CGNQ9P2M7 1197 aaKnown RBP13.07□□□□□ -0.32
USP8-212ENST00000560730 SIX4Q9UIU6 781 aa13.07□□□□□ -0.32
USP8-212ENST00000560730 PCDHB8Q9UN66 801 aa13.07□□□□□ -0.32
USP8-212ENST00000560730 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.07□□□□□ -0.32
USP8-212ENST00000560730 CDY1Q9Y6F8 540 aa13.07□□□□□ -0.32
USP8-212ENST00000560730 TSC2P49815 1807 aa13.07□□□□□ -0.32
USP8-212ENST00000560730 BDP1A6H8Y1 2624 aa13.06□□□□□ -0.32
USP8-212ENST00000560730 PDXKO00764 312 aa13.06□□□□□ -0.32
USP8-212ENST00000560730 PRPF40AO75400 957 aaKnown RBP13.06□□□□□ -0.32
USP8-212ENST00000560730 RFPL2O75678 378 aa13.06□□□□□ -0.32
USP8-212ENST00000560730 CASP4P49662 377 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms