RNA–Protein interactions for RNA: ENST00000558357.5

INO80-205, Transcript of INO80 complex subunit, humanhuman

TSL 1 (best)

Gene INO80, Length 5,503 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80-205ENST00000558357 H2AFY2Q9P0M6 372 aaPredicted RBP11.88□□□□□ -0.51
INO80-205ENST00000558357 ZC3H4Q9UPT8 1303 aaKnown RBP11.88□□□□□ -0.51
INO80-205ENST00000558357 A0A1B0GTH6 734 aa11.88□□□□□ -0.51
INO80-205ENST00000558357 NDUFS3O75489 264 aa11.88□□□□□ -0.51
INO80-205ENST00000558357 FKBP9O95302 570 aa11.88□□□□□ -0.51
INO80-205ENST00000558357 PDGFRAP16234 1089 aa11.88□□□□□ -0.51
INO80-205ENST00000558357 SPRP35270 261 aaPredicted RBP11.88□□□□□ -0.51
INO80-205ENST00000558357 LRRC74AQ0VAA2 488 aa11.88□□□□□ -0.51
INO80-205ENST00000558357 NAA30Q147X3 362 aaPredicted RBP11.88□□□□□ -0.51
INO80-205ENST00000558357 HLFQ16534 295 aa11.88□□□□□ -0.51
INO80-205ENST00000558357 FKBP9P1Q75LS8 142 aa11.88□□□□□ -0.51
INO80-205ENST00000558357 KDELC2Q7Z4H8 507 aa11.88□□□□□ -0.51
INO80-205ENST00000558357 APOBEC3FQ8IUX4 373 aaKnown RBP11.88□□□□□ -0.51
INO80-205ENST00000558357 CALML6Q8TD86 181 aa11.88□□□□□ -0.51
INO80-205ENST00000558357 FAM162AQ96A26 154 aa11.88□□□□□ -0.51
INO80-205ENST00000558357 ZNF668Q96K58 619 aaPredicted RBP11.88□□□□□ -0.51
INO80-205ENST00000558357 ROPN1BQ9BZX4 212 aaPredicted RBP11.88□□□□□ -0.51
INO80-205ENST00000558357 ROPN1Q9HAT0 212 aaPredicted RBP11.88□□□□□ -0.51
INO80-205ENST00000558357 GID8Q9NWU2 228 aa11.88□□□□□ -0.51
INO80-205ENST00000558357 PIM2Q9P1W9 311 aa11.88□□□□□ -0.51
INO80-205ENST00000558357 TRAPPC3O43617 180 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 PLA2G4AP47712 749 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 MTF1Q14872 753 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 MTFR1Q15390 333 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 LRRC36Q1X8D7 754 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 RNF149Q8NC42 400 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 APPL2Q8NEU8 664 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 TNIP2Q8NFZ5 429 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 AGAP3Q96P47 875 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 C20orf96Q9NUD7 363 aaPredicted RBP11.87□□□□□ -0.51
INO80-205ENST00000558357 PCMTD2Q9NV79 361 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 SCN3BQ9NY72 215 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 ZNF185O15231 689 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 FOXN1O15353 648 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 SLC26A4O43511 780 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 SRGNP10124 158 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 NMT1P30419 496 aaKnown RBP11.87□□□□□ -0.51
INO80-205ENST00000558357 RBP5P82980 135 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 CDC42EP1Q00587 391 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 PTK7Q13308 1070 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 KHDRBS2Q5VWX1 349 aaKnown RBP11.87□□□□□ -0.51
INO80-205ENST00000558357 BTN2A2Q8WVV5 523 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 INPP5DQ92835 1189 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 METP08581 1390 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 FAM196BA6NMK8 535 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 KIF28PB7ZC32 967 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 IMPDH2P12268 514 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 RXRBP28702 533 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 GALCP54803 685 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 EPHA10Q5JZY3 1008 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 RIBC1Q8N443 379 aaPredicted RBP11.87□□□□□ -0.51
INO80-205ENST00000558357 SCFD2Q8WU76 684 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 ERP27Q96DN0 273 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 MS4A14Q96JA4 679 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 CCSER1Q9C0I3 900 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 TMEM245Q9H330 911 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 JPH1Q9HDC5 661 aaPredicted RBP11.87□□□□□ -0.51
INO80-205ENST00000558357 FBXO2Q9UK22 296 aaPredicted RBP11.87□□□□□ -0.51
INO80-205ENST00000558357 SLC30A1Q9Y6M5 507 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 WBP4O75554 376 aaKnown RBP11.87□□□□□ -0.51
INO80-205ENST00000558357 ASMTLO95671 621 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 RALBP11234 206 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 LMBRD2Q68DH5 695 aaPredicted RBP11.87□□□□□ -0.51
INO80-205ENST00000558357 RASGRP2Q7LDG7 609 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 EFL1Q7Z2Z2 1120 aaKnown RBP11.87□□□□□ -0.51
INO80-205ENST00000558357 TRIM69Q86WT6 500 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 DDX42Q86XP3 938 aaKnown RBP eCLIP11.87□□□□□ -0.51
INO80-205ENST00000558357 C4orf33Q8N1A6 199 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 NEDD1Q8NHV4 660 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 TRIM9Q9C026 710 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 PAK5Q9P286 719 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 SEPT3Q9UH03 358 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 EFCAB6Q5THR3 1501 aa11.87□□□□□ -0.51
INO80-205ENST00000558357 SPATA31E1Q6ZUB1 1445 aa11.86□□□□□ -0.51
INO80-205ENST00000558357 M0R3G1 203 aa11.86□□□□□ -0.51
INO80-205ENST00000558357 SPP2Q13103 211 aa11.86□□□□□ -0.51
INO80-205ENST00000558357 TRIP10Q15642 601 aa11.86□□□□□ -0.51
INO80-205ENST00000558357 MFSD14CQ5VZR4 134 aa11.86□□□□□ -0.51
INO80-205ENST00000558357 TMEM154Q6P9G4 183 aa11.86□□□□□ -0.51
INO80-205ENST00000558357 TRPM8Q7Z2W7 1104 aa11.86□□□□□ -0.51
INO80-205ENST00000558357 METTL16Q86W50 562 aaKnown RBP11.86□□□□□ -0.51
INO80-205ENST00000558357 SHCBP1Q8NEM2 672 aa11.86□□□□□ -0.51
INO80-205ENST00000558357 DNAJC9Q8WXX5 260 aa11.86□□□□□ -0.51
INO80-205ENST00000558357 SEC16BQ96JE7 1060 aa11.86□□□□□ -0.51
INO80-205ENST00000558357 PRPF18Q99633 342 aaKnown RBP11.86□□□□□ -0.51
INO80-205ENST00000558357 THTPAQ9BU02 230 aa11.86□□□□□ -0.51
INO80-205ENST00000558357 ARAP3Q8WWN8 1544 aa11.86□□□□□ -0.51
INO80-205ENST00000558357 GSG1L2A8MUP6 293 aa11.86□□□□□ -0.51
INO80-205ENST00000558357 PHF20L1A8MW92 1017 aa11.86□□□□□ -0.51
INO80-205ENST00000558357 IGKV5-2P06315 115 aa11.86□□□□□ -0.51
INO80-205ENST00000558357 CACNB2Q08289 660 aaPredicted RBP11.86□□□□□ -0.51
INO80-205ENST00000558357 WLSQ5T9L3 541 aa11.86□□□□□ -0.51
INO80-205ENST00000558357 SLC30A9Q6PML9 568 aa11.86□□□□□ -0.51
INO80-205ENST00000558357 CCNI2Q6ZMN8 369 aaPredicted RBP11.86□□□□□ -0.51
INO80-205ENST00000558357 HORMAD1Q86X24 394 aa11.86□□□□□ -0.51
INO80-205ENST00000558357 SH2D3CQ8N5H7 860 aa11.86□□□□□ -0.51
INO80-205ENST00000558357 TADA1Q96BN2 335 aa11.86□□□□□ -0.51
INO80-205ENST00000558357 MARCOQ9UEW3 520 aaPredicted RBP11.86□□□□□ -0.51
INO80-205ENST00000558357 LSM7Q9UK45 103 aaKnown RBP11.86□□□□□ -0.51
INO80-205ENST00000558357 PAIP2BQ9ULR5 123 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms