RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 COLGALT1Q8NBJ5 622 aa10.9□□□□□ -0.66
HNRNPC-228ENST00000557033 RBBP8NLQ8NC74 664 aaPredicted RBP10.9□□□□□ -0.66
HNRNPC-228ENST00000557033 THAP3Q8WTV1 239 aaPredicted RBP10.9□□□□□ -0.66
HNRNPC-228ENST00000557033 TMEM143Q96AN5 459 aa10.9□□□□□ -0.66
HNRNPC-228ENST00000557033 PGBD4Q96DM1 585 aa10.9□□□□□ -0.66
HNRNPC-228ENST00000557033 MRPL9Q9BYD2 267 aaKnown RBP10.9□□□□□ -0.66
HNRNPC-228ENST00000557033 H3BQ06 376 aaPredicted RBP10.89□□□□□ -0.67
HNRNPC-228ENST00000557033 SRGAP2CP0DJJ0 459 aa10.89□□□□□ -0.67
HNRNPC-228ENST00000557033 MCM7P33993 719 aa10.89□□□□□ -0.67
HNRNPC-228ENST00000557033 PPM1AP35813 382 aa10.89□□□□□ -0.67
HNRNPC-228ENST00000557033 TRAPPC10P48553 1259 aa10.89□□□□□ -0.67
HNRNPC-228ENST00000557033 RAB27AP51159 221 aa10.89□□□□□ -0.67
HNRNPC-228ENST00000557033 GUCY1B3Q02153 619 aa10.89□□□□□ -0.67
HNRNPC-228ENST00000557033 NCBP1Q09161 790 aaKnown RBP10.89□□□□□ -0.67
HNRNPC-228ENST00000557033 SFSWAPQ12872 951 aaKnown RBP10.89□□□□□ -0.67
HNRNPC-228ENST00000557033 EMC2Q15006 297 aa10.89□□□□□ -0.67
HNRNPC-228ENST00000557033 TWF2Q6IBS0 349 aaKnown RBP10.89□□□□□ -0.67
HNRNPC-228ENST00000557033 KCNT2Q6UVM3 1135 aa10.89□□□□□ -0.67
HNRNPC-228ENST00000557033 EP400NLQ6ZTU2 488 aa10.89□□□□□ -0.67
HNRNPC-228ENST00000557033 FAM178BQ8IXR5 827 aa10.89□□□□□ -0.67
HNRNPC-228ENST00000557033 EFHBQ8N7U6 833 aa10.89□□□□□ -0.67
HNRNPC-228ENST00000557033 RNF169Q8NCN4 708 aa10.89□□□□□ -0.67
HNRNPC-228ENST00000557033 MRPS27Q92552 414 aaKnown RBP10.89□□□□□ -0.67
HNRNPC-228ENST00000557033 ZNF558Q96NG5 402 aa10.89□□□□□ -0.67
HNRNPC-228ENST00000557033 CDCA3Q99618 268 aaPredicted RBP10.89□□□□□ -0.67
HNRNPC-228ENST00000557033 BHLHE41Q9C0J9 482 aaPredicted RBP10.89□□□□□ -0.67
HNRNPC-228ENST00000557033 IGFLR1Q9H665 355 aa10.89□□□□□ -0.67
HNRNPC-228ENST00000557033 RUBCNLQ9H714 662 aa10.89□□□□□ -0.67
HNRNPC-228ENST00000557033 TUFT1Q9NNX1 390 aa10.89□□□□□ -0.67
HNRNPC-228ENST00000557033 TLR9Q9NR96 1032 aa10.89□□□□□ -0.67
HNRNPC-228ENST00000557033 AGPAT5Q9NUQ2 364 aa10.89□□□□□ -0.67
HNRNPC-228ENST00000557033 FAM105AQ9NUU6 356 aa10.89□□□□□ -0.67
HNRNPC-228ENST00000557033 PIN4Q9Y237 131 aaKnown RBP10.89□□□□□ -0.67
HNRNPC-228ENST00000557033 CUL9Q8IWT3 2517 aa10.89□□□□□ -0.67
HNRNPC-228ENST00000557033 ATG2AQ2TAZ0 1938 aa10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 A0A096LPE4 126 aa10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 A0A1W2PPZ6 126 aa10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 METTL12A8MUP2 240 aa10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 RARAP10276 462 aa10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 IL9P15248 144 aa10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 ATF7P17544 494 aaPredicted RBP10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 AXLP30530 894 aa10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 SOX18P35713 384 aa10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 ARL2P36404 184 aa10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 ALDH7A1P49419 539 aaKnown RBP10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 RARRES1P49788 294 aa10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 ERVFC1P60507 584 aa10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 HYAL2Q12891 473 aa10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 TFDP1Q14186 410 aa10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 CLLU1OSQ5K130 101 aa10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 MRPL10Q7Z7H8 261 aaKnown RBP10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 NOSTRINQ8IVI9 506 aa10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 RNF149Q8NC42 400 aa10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 CNNM3Q8NE01 707 aa10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 ERMNQ8TAM6 284 aa10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 NXPE3Q969Y0 559 aa10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 NACC1Q96RE7 527 aa10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 POLR3CQ9BUI4 534 aaPredicted RBP10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 C1QTNF1Q9BXJ1 281 aa10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 NFKBIZQ9BYH8 718 aa10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 MIR1-1HGQ9H1L0 117 aa10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 TMEM60Q9H2L4 133 aa10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 TLE6Q9H808 572 aa10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 UPF2Q9HAU5 1272 aaKnown RBP10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 PLXNA4Q9HCM2 1894 aa10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 NGRNQ9NPE2 291 aaKnown RBP10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 SPG21Q9NZD8 308 aa10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 NOL7Q9UMY1 257 aaKnown RBP10.88□□□□□ -0.67
HNRNPC-228ENST00000557033 FSCN2O14926 492 aa10.87□□□□□ -0.67
HNRNPC-228ENST00000557033 CILPO75339 1184 aa10.87□□□□□ -0.67
HNRNPC-228ENST00000557033 OFD1O75665 1012 aa10.87□□□□□ -0.67
HNRNPC-228ENST00000557033 OR52Z1P0C646 297 aa10.87□□□□□ -0.67
HNRNPC-228ENST00000557033 SPATA31C1P0DKV0 1188 aa10.87□□□□□ -0.67
HNRNPC-228ENST00000557033 IMPDH2P12268 514 aa10.87□□□□□ -0.67
HNRNPC-228ENST00000557033 MUTP22033 750 aa10.87□□□□□ -0.67
HNRNPC-228ENST00000557033 U2AF2P26368 475 aaKnown RBP eCLIP10.87□□□□□ -0.676e-16■■■■■ 52.2
HNRNPC-228ENST00000557033 RPA1P27694 616 aa10.87□□□□□ -0.67
HNRNPC-228ENST00000557033 HOXA11P31270 313 aaPredicted RBP10.87□□□□□ -0.67
HNRNPC-228ENST00000557033 TECP42680 631 aa10.87□□□□□ -0.67
HNRNPC-228ENST00000557033 NRIP1P48552 1158 aa10.87□□□□□ -0.67
HNRNPC-228ENST00000557033 MCM2P49736 904 aa10.87□□□□□ -0.67
HNRNPC-228ENST00000557033 PTENP60484 403 aa10.87□□□□□ -0.67
HNRNPC-228ENST00000557033 CLCQ05315 142 aa10.87□□□□□ -0.67
HNRNPC-228ENST00000557033 DLX2Q07687 328 aaPredicted RBP10.87□□□□□ -0.67
HNRNPC-228ENST00000557033 PDIA5Q14554 519 aa10.87□□□□□ -0.67
HNRNPC-228ENST00000557033 ZNF174Q15697 407 aa10.87□□□□□ -0.67
HNRNPC-228ENST00000557033 TTC38Q5R3I4 469 aa10.87□□□□□ -0.67
HNRNPC-228ENST00000557033 LARP1BQ659C4 914 aaKnown RBP10.87□□□□□ -0.67
HNRNPC-228ENST00000557033 GLB1LQ6UWU2 654 aa10.87□□□□□ -0.67
HNRNPC-228ENST00000557033 ADGRD2Q7Z7M1 963 aa10.87□□□□□ -0.67
HNRNPC-228ENST00000557033 CATSPER3Q86XQ3 398 aa10.87□□□□□ -0.67
HNRNPC-228ENST00000557033 CYP4X1Q8N118 509 aa10.87□□□□□ -0.67
HNRNPC-228ENST00000557033 SLC39A11Q8N1S5 342 aa10.87□□□□□ -0.67
HNRNPC-228ENST00000557033 CCDC43Q96MW1 224 aaKnown RBP10.87□□□□□ -0.67
HNRNPC-228ENST00000557033 UBN1Q9NPG3 1134 aa10.87□□□□□ -0.67
HNRNPC-228ENST00000557033 XPNPEP1Q9NQW7 623 aa10.87□□□□□ -0.67
HNRNPC-228ENST00000557033 TOR4AQ9NXH8 423 aa10.87□□□□□ -0.67
HNRNPC-228ENST00000557033 CD207Q9UJ71 328 aa10.87□□□□□ -0.67
HNRNPC-228ENST00000557033 DBR1Q9UK59 544 aaKnown RBP10.87□□□□□ -0.67
HNRNPC-228ENST00000557033 KIF3AQ9Y496 699 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms