RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 ARID3AQ99856 593 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 ZSWIM1Q9BR11 485 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 UBN1Q9NPG3 1134 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 RAB20Q9NX57 234 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 GCNT4Q9P109 453 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 DAAM1Q9Y4D1 1078 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 TBC1D4O60343 1298 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 MYL6P60660 151 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 DCAF17Q5H9S7 520 aaPredicted RBP7.29□□□□□ -1.24
LINC00517-202ENST00000554257 IRF2BP2Q7Z5L9 587 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 LRRC52Q8N7C0 313 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 FBXL13Q8NEE6 735 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 RSPH1Q8WYR4 309 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 SHC3Q92529 594 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 CLP1Q92989 425 aaKnown RBP7.29□□□□□ -1.24
LINC00517-202ENST00000554257 SCLT1Q96NL6 688 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 PI4K2AQ9BTU6 479 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 CCDC94Q9BW85 323 aaPredicted RBP7.29□□□□□ -1.24
LINC00517-202ENST00000554257 NRDE2Q9H7Z3 1164 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 DPP3Q9NY33 737 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 DNAJB4Q9UDY4 337 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 GABRDO14764 452 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 N4BP1O75113 896 aaKnown RBP7.29□□□□□ -1.24
LINC00517-202ENST00000554257 UCHL3P15374 230 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 BMP8BP34820 402 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 MXI1P50539 228 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 CLCNKBP51801 687 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 GCNT1Q02742 428 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 UBXN1Q04323 297 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 PPIGQ13427 754 aaKnown RBP eCLIP7.29□□□□□ -1.24
LINC00517-202ENST00000554257 HSP90AA2PQ14568 343 aaPredicted RBP7.29□□□□□ -1.24
LINC00517-202ENST00000554257 GLRA4Q5JXX5 417 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 C9orf50Q5SZB4 431 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 KIAA0319Q5VV43 1072 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 SPECC1LQ69YQ0 1117 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 ZNF365Q70YC5 407 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 TMEM173Q86WV6 379 aaPredicted RBP7.29□□□□□ -1.24
LINC00517-202ENST00000554257 CCDC127Q96BQ5 260 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 APEX2Q9UBZ4 518 aa7.29□□□□□ -1.24
LINC00517-202ENST00000554257 COL4A3Q01955 1670 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 F8VZ95 297 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 STX10O60499 249 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 MFAP3LO75121 409 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 CYP11A1P05108 521 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 DLATP10515 647 aaKnown RBP7.28□□□□□ -1.24
LINC00517-202ENST00000554257 SYN1P17600 705 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 MAGEA10P43363 369 aaPredicted RBP7.28□□□□□ -1.24
LINC00517-202ENST00000554257 CCZ1BP86790 482 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 CCZ1P86791 482 aaPredicted RBP7.28□□□□□ -1.24
LINC00517-202ENST00000554257 GOLGA8FQ08AF8 430 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 GOLGA8DPQ0D2H9 430 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 MRPL58Q14197 206 aaKnown RBP7.28□□□□□ -1.24
LINC00517-202ENST00000554257 DUOXA2Q1HG44 320 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 EDEM3Q9BZQ6 932 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 AIPL1Q9NZN9 384 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 IMPACTQ9P2X3 320 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 MYO6Q9UM54 1294 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 VNN2O95498 520 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 ITGB3P05106 788 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 ZSCAN20P17040 1043 aaPredicted RBP7.28□□□□□ -1.24
LINC00517-202ENST00000554257 ATICP31939 592 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 NCOA4Q13772 614 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 IKBKEQ14164 716 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 PDXDC1Q6P996 788 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 GBP6Q6ZN66 633 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 FAM71AQ8IYT1 594 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 CMTR2Q8IYT2 770 aaKnown RBP7.28□□□□□ -1.24
LINC00517-202ENST00000554257 TAF4BQ92750 862 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 JAKMIP2Q96AA8 810 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 KIF12Q96FN5 646 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 LSM14BQ9BX40 385 aaKnown RBP7.28□□□□□ -1.24
LINC00517-202ENST00000554257 FAM124BQ9H5Z6 455 aaPredicted RBP7.28□□□□□ -1.24
LINC00517-202ENST00000554257 HMGXB4Q9UGU5 601 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 NOCTQ9UK39 431 aaKnown RBP7.28□□□□□ -1.24
LINC00517-202ENST00000554257 UBQLN1Q9UMX0 589 aaKnown RBP7.28□□□□□ -1.24
LINC00517-202ENST00000554257 POLIQ9UNA4 740 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 COL4A2P08572 1712 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 CBFA2T2O43439 604 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 KIF4AO95239 1232 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 SERPINC1P01008 464 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 RAG1P15918 1043 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 CLCN1P35523 988 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 PRKCIP41743 596 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 LILRA4P59901 499 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 TUSC3Q13454 348 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 EXOC3L4Q17RC7 722 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 SOWAHAQ2M3V2 549 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 NOMO2Q5JPE7 1267 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 APBB1IPQ7Z5R6 666 aaPredicted RBP7.28□□□□□ -1.24
LINC00517-202ENST00000554257 SLC30A5Q8TAD4 765 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 SYN2Q92777 582 aaPredicted RBP7.28□□□□□ -1.24
LINC00517-202ENST00000554257 PGBD4Q96DM1 585 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 TWNKQ96RR1 684 aa7.28□□□□□ -1.24
LINC00517-202ENST00000554257 MAGEC2Q9UBF1 373 aaPredicted RBP7.28□□□□□ -1.24
LINC00517-202ENST00000554257 EFCAB14O75071 495 aa7.27□□□□□ -1.25
LINC00517-202ENST00000554257 GJB5O95377 273 aa7.27□□□□□ -1.25
LINC00517-202ENST00000554257 LCA5LO95447 670 aa7.27□□□□□ -1.25
LINC00517-202ENST00000554257 KRT13P13646 458 aa7.27□□□□□ -1.25
LINC00517-202ENST00000554257 CHRNB2P17787 502 aa7.27□□□□□ -1.25
LINC00517-202ENST00000554257 RFX1P22670 979 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms