RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 TUBB2BQ9BVA1 445 aa11.69□□□□□ -0.54
PABPN1-203ENST00000553960 EIF2AQ9BY44 585 aaKnown RBP11.69□□□□□ -0.54
PABPN1-203ENST00000553960 MTMR12Q9C0I1 747 aa11.69□□□□□ -0.54
PABPN1-203ENST00000553960 RNF208Q9H0X6 261 aa11.69□□□□□ -0.54
PABPN1-203ENST00000553960 AGO3Q9H9G7 860 aaKnown RBP11.69□□□□□ -0.54
PABPN1-203ENST00000553960 APOBEC3GQ9HC16 384 aaKnown RBP11.69□□□□□ -0.54
PABPN1-203ENST00000553960 PRDM10Q9NQV6 1147 aa11.69□□□□□ -0.54
PABPN1-203ENST00000553960 TRMT13Q9NUP7 481 aaKnown RBP11.69□□□□□ -0.54
PABPN1-203ENST00000553960 NAGPAQ9UK23 515 aa11.69□□□□□ -0.54
PABPN1-203ENST00000553960 AJAP1Q9UKB5 411 aaPredicted RBP11.69□□□□□ -0.54
PABPN1-203ENST00000553960 TANC1Q9C0D5 1861 aa11.69□□□□□ -0.54
PABPN1-203ENST00000553960 TTC3P53804 2025 aa11.69□□□□□ -0.54
PABPN1-203ENST00000553960 SMIM28A0A1B0GU29 152 aa11.68□□□□□ -0.54
PABPN1-203ENST00000553960 C9IYK1 514 aa11.68□□□□□ -0.54
PABPN1-203ENST00000553960 TLR3O15455 904 aaKnown RBP11.68□□□□□ -0.54
PABPN1-203ENST00000553960 KRT86O43790 486 aa11.68□□□□□ -0.54
PABPN1-203ENST00000553960 TACC1O75410 805 aa11.68□□□□□ -0.54
PABPN1-203ENST00000553960 OFD1O75665 1012 aa11.68□□□□□ -0.54
PABPN1-203ENST00000553960 NFICP08651 508 aa11.68□□□□□ -0.54
PABPN1-203ENST00000553960 ZSCAN20P17040 1043 aaPredicted RBP11.68□□□□□ -0.54
PABPN1-203ENST00000553960 CDH5P33151 784 aaPredicted RBP11.68□□□□□ -0.54
PABPN1-203ENST00000553960 RFC2P35250 354 aa11.68□□□□□ -0.54
PABPN1-203ENST00000553960 ASPAP45381 313 aa11.68□□□□□ -0.54
PABPN1-203ENST00000553960 AARSP49588 968 aaKnown RBP eCLIP11.68□□□□□ -0.54
PABPN1-203ENST00000553960 PAK2Q13177 524 aa11.68□□□□□ -0.54
PABPN1-203ENST00000553960 BIRC3Q13489 604 aa11.68□□□□□ -0.54
PABPN1-203ENST00000553960 MTF1Q14872 753 aa11.68□□□□□ -0.54
PABPN1-203ENST00000553960 MTFR1Q15390 333 aa11.68□□□□□ -0.54
PABPN1-203ENST00000553960 TMEM132AQ24JP5 1023 aa11.68□□□□□ -0.54
PABPN1-203ENST00000553960 PLEKHG4Q58EX7 1191 aa11.68□□□□□ -0.54
PABPN1-203ENST00000553960 SLC39A5Q6ZMH5 540 aa11.68□□□□□ -0.54
PABPN1-203ENST00000553960 SLC24A5Q71RS6 500 aa11.68□□□□□ -0.54
PABPN1-203ENST00000553960 PPM1KQ8N3J5 372 aa11.68□□□□□ -0.54
PABPN1-203ENST00000553960 GSTCDQ8NEC7 633 aa11.68□□□□□ -0.54
PABPN1-203ENST00000553960 TATDN2Q93075 761 aa11.68□□□□□ -0.54
PABPN1-203ENST00000553960 PGBD4Q96DM1 585 aa11.68□□□□□ -0.54
PABPN1-203ENST00000553960 TRIM6Q9C030 488 aaPredicted RBP11.68□□□□□ -0.54
PABPN1-203ENST00000553960 ZNF518BQ9C0D4 1074 aa11.68□□□□□ -0.54
PABPN1-203ENST00000553960 DPP3Q9NY33 737 aa11.68□□□□□ -0.54
PABPN1-203ENST00000553960 PCDHGC3Q9UN70 934 aa11.68□□□□□ -0.54
PABPN1-203ENST00000553960 NOD1Q9Y239 953 aa11.68□□□□□ -0.54
PABPN1-203ENST00000553960 NUB1Q9Y5A7 615 aa11.68□□□□□ -0.54
PABPN1-203ENST00000553960 KIAA0100Q14667 2235 aaKnown RBP11.68□□□□□ -0.54
PABPN1-203ENST00000553960 A0A087X0T9 212 aa11.67□□□□□ -0.54
PABPN1-203ENST00000553960 AKR1B10O60218 316 aa11.67□□□□□ -0.54
PABPN1-203ENST00000553960 PHACTR2O75167 634 aa11.67□□□□□ -0.54
PABPN1-203ENST00000553960 MTA2O94776 668 aa11.67□□□□□ -0.54
PABPN1-203ENST00000553960 LSM8O95777 96 aaKnown RBP11.67□□□□□ -0.54
PABPN1-203ENST00000553960 FAM228BP0C875 321 aa11.67□□□□□ -0.54
PABPN1-203ENST00000553960 CYP11B1P15538 503 aa11.67□□□□□ -0.54
PABPN1-203ENST00000553960 ATF7P17544 494 aaPredicted RBP11.67□□□□□ -0.54
PABPN1-203ENST00000553960 TERF1P54274 439 aa11.67□□□□□ -0.54
PABPN1-203ENST00000553960 MYL6P60660 151 aa11.67□□□□□ -0.54
PABPN1-203ENST00000553960 TFAMQ00059 246 aaKnown RBP11.67□□□□□ -0.54
PABPN1-203ENST00000553960 CDR2Q01850 454 aa11.67□□□□□ -0.54
PABPN1-203ENST00000553960 APBA1Q02410 837 aa11.67□□□□□ -0.54
PABPN1-203ENST00000553960 TMEM62Q0P6H9 643 aa11.67□□□□□ -0.54
PABPN1-203ENST00000553960 MYO1EQ12965 1108 aa11.67□□□□□ -0.54
PABPN1-203ENST00000553960 TRPC3Q13507 836 aa11.67□□□□□ -0.54
PABPN1-203ENST00000553960 MBTPS1Q14703 1052 aa11.67□□□□□ -0.54
PABPN1-203ENST00000553960 PTPN14Q15678 1187 aa11.67□□□□□ -0.54
PABPN1-203ENST00000553960 ZNF667Q5HYK9 610 aa11.67□□□□□ -0.54
PABPN1-203ENST00000553960 TWF2Q6IBS0 349 aaKnown RBP11.67□□□□□ -0.54
PABPN1-203ENST00000553960 ALKBH5Q6P6C2 394 aaKnown RBP11.67□□□□□ -0.54
PABPN1-203ENST00000553960 LRRC8DQ7L1W4 858 aa11.67□□□□□ -0.54
PABPN1-203ENST00000553960 UNC93AQ86WB7 457 aa11.67□□□□□ -0.54
PABPN1-203ENST00000553960 DDX27Q96GQ7 796 aaKnown RBP11.67□□□□□ -0.54
PABPN1-203ENST00000553960 ZNF668Q96K58 619 aaPredicted RBP11.67□□□□□ -0.54
PABPN1-203ENST00000553960 UROC1Q96N76 676 aa11.67□□□□□ -0.54
PABPN1-203ENST00000553960 ZMAT2Q96NC0 199 aaKnown RBP11.67□□□□□ -0.54
PABPN1-203ENST00000553960 AGPAT1Q99943 283 aa11.67□□□□□ -0.54
PABPN1-203ENST00000553960 IFIH1Q9BYX4 1025 aaKnown RBP11.67□□□□□ -0.54
PABPN1-203ENST00000553960 TRPV6Q9H1D0 765 aa11.67□□□□□ -0.54
PABPN1-203ENST00000553960 NXF3Q9H4D5 531 aaKnown RBP11.67□□□□□ -0.54
PABPN1-203ENST00000553960 SNTG2Q9NY99 539 aa11.67□□□□□ -0.54
PABPN1-203ENST00000553960 TBX21Q9UL17 535 aa11.67□□□□□ -0.54
PABPN1-203ENST00000553960 PAXBP1Q9Y5B6 917 aa11.67□□□□□ -0.54
PABPN1-203ENST00000553960 PCDHA13Q9Y5I0 950 aa11.67□□□□□ -0.54
PABPN1-203ENST00000553960 SCN1AP35498 2009 aa11.67□□□□□ -0.54
PABPN1-203ENST00000553960 CENPFP49454 3210 aa11.66□□□□□ -0.54
PABPN1-203ENST00000553960 CARNS1A5YM72 827 aa11.66□□□□□ -0.54
PABPN1-203ENST00000553960 ANKRD62A6NC57 917 aa11.66□□□□□ -0.54
PABPN1-203ENST00000553960 USP27XA6NNY8 438 aa11.66□□□□□ -0.54
PABPN1-203ENST00000553960 DCDC2CA8MYV0 355 aa11.66□□□□□ -0.54
PABPN1-203ENST00000553960 TMEM189-UBE2V1I3L0A0 370 aa11.66□□□□□ -0.54
PABPN1-203ENST00000553960 DDX3XO00571 662 aaKnown RBP eCLIP11.66□□□□□ -0.54
PABPN1-203ENST00000553960 PTGESO14684 152 aa11.66□□□□□ -0.54
PABPN1-203ENST00000553960 LRRN2O75325 713 aa11.66□□□□□ -0.54
PABPN1-203ENST00000553960 CYP1A1P04798 512 aaPredicted RBP11.66□□□□□ -0.54
PABPN1-203ENST00000553960 PLEKP08567 350 aaPredicted RBP11.66□□□□□ -0.54
PABPN1-203ENST00000553960 GSCP56915 257 aaPredicted RBP11.66□□□□□ -0.54
PABPN1-203ENST00000553960 KIF5AQ12840 1032 aa11.66□□□□□ -0.54
PABPN1-203ENST00000553960 GPNMBQ14956 572 aa11.66□□□□□ -0.54
PABPN1-203ENST00000553960 STILQ15468 1287 aa11.66□□□□□ -0.54
PABPN1-203ENST00000553960 ZNF699Q32M78 642 aa11.66□□□□□ -0.54
PABPN1-203ENST00000553960 SEZ6Q53EL9 994 aa11.66□□□□□ -0.54
PABPN1-203ENST00000553960 GJB7Q6PEY0 223 aa11.66□□□□□ -0.54
PABPN1-203ENST00000553960 AGMOQ6ZNB7 445 aa11.66□□□□□ -0.54
PABPN1-203ENST00000553960 UBE2Q1Q7Z7E8 422 aa11.66□□□□□ -0.54
PABPN1-203ENST00000553960 ZNF560Q96MR9 790 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms