RNA–Protein interactions for RNA: ENST00000540139.5

CYB561A3-214, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-214ENST00000540139 TNNC2P02585 160 aa12.77□□□□□ -0.37
CYB561A3-214ENST00000540139 GALTP07902 379 aa12.77□□□□□ -0.37
CYB561A3-214ENST00000540139 NFICP08651 508 aa12.77□□□□□ -0.37
CYB561A3-214ENST00000540139 DLATP10515 647 aaKnown RBP12.77□□□□□ -0.37
CYB561A3-214ENST00000540139 ZNF18P17022 549 aa12.77□□□□□ -0.37
CYB561A3-214ENST00000540139 TNNI1P19237 187 aa12.77□□□□□ -0.37
CYB561A3-214ENST00000540139 BMPR1AP36894 532 aa12.77□□□□□ -0.37
CYB561A3-214ENST00000540139 PNPLA4P41247 253 aa12.77□□□□□ -0.37
CYB561A3-214ENST00000540139 RABGGTBP53611 331 aa12.77□□□□□ -0.37
CYB561A3-214ENST00000540139 WNT7BP56706 349 aa12.77□□□□□ -0.37
CYB561A3-214ENST00000540139 ERVK-21P61565 698 aa12.77□□□□□ -0.37
CYB561A3-214ENST00000540139 TFAMQ00059 246 aaKnown RBP12.77□□□□□ -0.37
CYB561A3-214ENST00000540139 UPP1Q16831 310 aa12.77□□□□□ -0.37
CYB561A3-214ENST00000540139 ZACNQ401N2 412 aa12.77□□□□□ -0.37
CYB561A3-214ENST00000540139 C1orf220Q5T0J3 134 aa12.77□□□□□ -0.37
CYB561A3-214ENST00000540139 C6orf132Q5T0Z8 1188 aa12.77□□□□□ -0.37
CYB561A3-214ENST00000540139 IER5LQ5T953 404 aa12.77□□□□□ -0.37
CYB561A3-214ENST00000540139 C15orf39Q6ZRI6 1047 aa12.77□□□□□ -0.37
CYB561A3-214ENST00000540139 ZNF280BQ86YH2 543 aa12.77□□□□□ -0.37
CYB561A3-214ENST00000540139 DHX40Q8IX18 779 aaKnown RBP12.77□□□□□ -0.37
CYB561A3-214ENST00000540139 GPR65Q8IYL9 337 aa12.77□□□□□ -0.37
CYB561A3-214ENST00000540139 PLEKHO2Q8TD55 490 aa12.77□□□□□ -0.37
CYB561A3-214ENST00000540139 SLC35C1Q96A29 364 aa12.77□□□□□ -0.37
CYB561A3-214ENST00000540139 EEF2KMTQ96G04 330 aa12.77□□□□□ -0.37
CYB561A3-214ENST00000540139 FAXDC2Q96IV6 333 aa12.77□□□□□ -0.37
CYB561A3-214ENST00000540139 ZNF558Q96NG5 402 aa12.77□□□□□ -0.37
CYB561A3-214ENST00000540139 TGS1Q96RS0 853 aaKnown RBP12.77□□□□□ -0.37
CYB561A3-214ENST00000540139 COLEC11Q9BWP8 271 aa12.77□□□□□ -0.37
CYB561A3-214ENST00000540139 CXCL16Q9H2A7 254 aa12.77□□□□□ -0.37
CYB561A3-214ENST00000540139 DPP3Q9NY33 737 aa12.77□□□□□ -0.37
CYB561A3-214ENST00000540139 FAN1Q9Y2M0 1017 aa12.77□□□□□ -0.37
CYB561A3-214ENST00000540139 PCDHB12Q9Y5F1 795 aa12.77□□□□□ -0.37
CYB561A3-214ENST00000540139 MRPL42Q9Y6G3 142 aaKnown RBP12.77□□□□□ -0.37
CYB561A3-214ENST00000540139 PTPRSQ13332 1948 aa12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 LRRIQ3A6PVS8 624 aaPredicted RBP12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 PIRO00625 290 aa12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 STAU1O95793 577 aaKnown RBP12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 C4BPAP04003 597 aaKnown RBP12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 TMEM191BP0C7N4 346 aa12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 BCAR1P56945 870 aa12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 TPM4P67936 248 aa12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 RBP5P82980 135 aa12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 PLCB3Q01970 1234 aa12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 TAP1Q03518 808 aa12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 SOX4Q06945 474 aaPredicted RBP12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 PAN2Q504Q3 1202 aaKnown RBP12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 TCP11X2Q5H9J9 407 aa12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 GLRA4Q5JXX5 417 aa12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 KRT39Q6A163 491 aa12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 GPR153Q6NV75 609 aa12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 KCNT2Q6UVM3 1135 aa12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 DNAJC14Q6Y2X3 702 aaPredicted RBP12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 SV2AQ7L0J3 742 aa12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 TRAPPC11Q7Z392 1133 aa12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 LRRC52Q8N7C0 313 aa12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 ANKRD20A12PQ8NF67 263 aa12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 CXorf38Q8TB03 319 aa12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 PRR7Q8TB68 274 aa12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 ZNF516Q92618 1163 aa12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 TIFAQ96CG3 184 aa12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 CNOT6LQ96LI5 555 aaKnown RBP12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 CBX8Q9HC52 389 aa12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 TMEM8AQ9HCN3 771 aa12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 SAMSN1Q9NSI8 373 aaKnown RBP12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 FANCLQ9NW38 375 aa12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 LZTS1Q9Y250 596 aa12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 YBX2Q9Y2T7 364 aaKnown RBP12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 COQ4Q9Y3A0 265 aa12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 RALGAPA2Q2PPJ7 1873 aa12.76□□□□□ -0.37
CYB561A3-214ENST00000540139 GTPBP10A4D1E9 387 aaKnown RBP12.75□□□□□ -0.37
CYB561A3-214ENST00000540139 LCHNA4D1U4 455 aa12.75□□□□□ -0.37
CYB561A3-214ENST00000540139 KCNJ18B7U540 433 aa12.75□□□□□ -0.37
CYB561A3-214ENST00000540139 PODXLO00592 558 aa12.75□□□□□ -0.37
CYB561A3-214ENST00000540139 ZC3H11AO75152 810 aaKnown RBP eCLIP12.75□□□□□ -0.37
CYB561A3-214ENST00000540139 EFEMP2O95967 443 aa12.75□□□□□ -0.37
CYB561A3-214ENST00000540139 CA3P07451 260 aa12.75□□□□□ -0.37
CYB561A3-214ENST00000540139 FAM163BP0C2L3 166 aa12.75□□□□□ -0.37
CYB561A3-214ENST00000540139 DNAJB2P25686 324 aa12.75□□□□□ -0.37
CYB561A3-214ENST00000540139 ATICP31939 592 aa12.75□□□□□ -0.37
CYB561A3-214ENST00000540139 SLC11A1P49279 550 aa12.75□□□□□ -0.37
CYB561A3-214ENST00000540139 AARSP49588 968 aaKnown RBP eCLIP12.75□□□□□ -0.37
CYB561A3-214ENST00000540139 DLG4P78352 724 aa12.75□□□□□ -0.37
CYB561A3-214ENST00000540139 UBE3AQ05086 875 aa12.75□□□□□ -0.37
CYB561A3-214ENST00000540139 CETN1Q12798 172 aa12.75□□□□□ -0.37
CYB561A3-214ENST00000540139 ELAVL2Q12926 359 aaKnown RBP12.75□□□□□ -0.37
CYB561A3-214ENST00000540139 KCNJ12Q14500 433 aa12.75□□□□□ -0.37
CYB561A3-214ENST00000540139 MAN2A1Q16706 1144 aa12.75□□□□□ -0.37
CYB561A3-214ENST00000540139 C9orf57Q5W0N0 161 aa12.75□□□□□ -0.37
CYB561A3-214ENST00000540139 SLC39A11Q8N1S5 342 aa12.75□□□□□ -0.37
CYB561A3-214ENST00000540139 AOPEPQ8N6M6 819 aa12.75□□□□□ -0.37
CYB561A3-214ENST00000540139 C1orf127Q8N9H9 656 aa12.75□□□□□ -0.37
CYB561A3-214ENST00000540139 COLGALT1Q8NBJ5 622 aa12.75□□□□□ -0.37
CYB561A3-214ENST00000540139 OR5B17Q8NGF7 314 aa12.75□□□□□ -0.37
CYB561A3-214ENST00000540139 TAF4BQ92750 862 aa12.75□□□□□ -0.37
CYB561A3-214ENST00000540139 C18orf25Q96B23 403 aaPredicted RBP12.75□□□□□ -0.37
CYB561A3-214ENST00000540139 POP1Q99575 1024 aaKnown RBP12.75□□□□□ -0.37
CYB561A3-214ENST00000540139 HSD3B7Q9H2F3 369 aa12.75□□□□□ -0.37
CYB561A3-214ENST00000540139 SLC28A3Q9HAS3 691 aa12.75□□□□□ -0.37
CYB561A3-214ENST00000540139 SPG21Q9NZD8 308 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms