RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 OR1D2P34982 312 aa18.68■□□□□ 0.58
SFSWAP-205ENST00000537164 JADE1Q6IE81 842 aa18.68■□□□□ 0.58
SFSWAP-205ENST00000537164 SPATA31D4Q6ZUB0 917 aa18.68■□□□□ 0.58
SFSWAP-205ENST00000537164 EPM2AIP1Q7L775 607 aaPredicted RBP18.68■□□□□ 0.58
SFSWAP-205ENST00000537164 ZDHHC14Q8IZN3 488 aa18.68■□□□□ 0.58
SFSWAP-205ENST00000537164 SPATA32Q96LK8 384 aa18.68■□□□□ 0.58
SFSWAP-205ENST00000537164 FAM237AA0A1B0GTK4 181 aa18.67■□□□□ 0.58
SFSWAP-205ENST00000537164 C2CD4DB7Z1M9 353 aa18.67■□□□□ 0.58
SFSWAP-205ENST00000537164 EIF3DO15371 548 aaKnown RBP eCLIP18.67■□□□□ 0.582e-6■□□□□ 9.5
SFSWAP-205ENST00000537164 LDHAP00338 332 aaKnown RBP18.67■□□□□ 0.58
SFSWAP-205ENST00000537164 POU2F2P09086 479 aa18.67■□□□□ 0.58
SFSWAP-205ENST00000537164 HNRNPA1P09651 372 aaKnown RBP eCLIP18.67■□□□□ 0.58
SFSWAP-205ENST00000537164 SLFN14P0C7P3 912 aa18.67■□□□□ 0.58
SFSWAP-205ENST00000537164 ASIC1P78348 528 aa18.67■□□□□ 0.58
SFSWAP-205ENST00000537164 UVSSAQ2YD98 709 aa18.67■□□□□ 0.58
SFSWAP-205ENST00000537164 TMEM31Q5JXX7 168 aa18.67■□□□□ 0.58
SFSWAP-205ENST00000537164 VARS2Q5ST30 1063 aaKnown RBP18.67■□□□□ 0.58
SFSWAP-205ENST00000537164 CCDC149Q6ZUS6 474 aa18.67■□□□□ 0.58
SFSWAP-205ENST00000537164 STXBP4Q6ZWJ1 553 aa18.67■□□□□ 0.58
SFSWAP-205ENST00000537164 UNC13DQ70J99 1090 aa18.67■□□□□ 0.58
SFSWAP-205ENST00000537164 NT5DC4Q86YG4 428 aa18.67■□□□□ 0.58
SFSWAP-205ENST00000537164 PLCD3Q8N3E9 789 aa18.67■□□□□ 0.58
SFSWAP-205ENST00000537164 BEST2Q8NFU1 509 aa18.67■□□□□ 0.58
SFSWAP-205ENST00000537164 PRKD2Q9BZL6 878 aa18.67■□□□□ 0.58
SFSWAP-205ENST00000537164 SCAND2PQ9GZW5 306 aaPredicted RBP18.67■□□□□ 0.58
SFSWAP-205ENST00000537164 WDR6Q9NNW5 1121 aaKnown RBP18.67■□□□□ 0.58
SFSWAP-205ENST00000537164 HPSEQ9Y251 543 aa18.67■□□□□ 0.58
SFSWAP-205ENST00000537164 CDY1Q9Y6F8 540 aa18.67■□□□□ 0.58
SFSWAP-205ENST00000537164 DOCK8Q8NF50 2099 aa18.67■□□□□ 0.58
SFSWAP-205ENST00000537164 TECTAO75443 2155 aa18.66■□□□□ 0.58
SFSWAP-205ENST00000537164 SCN1AP35498 2009 aa18.66■□□□□ 0.58
SFSWAP-205ENST00000537164 PVALEFA0A1B0GWK0 134 aa18.66■□□□□ 0.58
SFSWAP-205ENST00000537164 ANO9A1A5B4 782 aa18.66■□□□□ 0.58
SFSWAP-205ENST00000537164 H7C4K7 107 aa18.66■□□□□ 0.58
SFSWAP-205ENST00000537164 KIAA0391O15091 583 aaKnown RBP18.66■□□□□ 0.58
SFSWAP-205ENST00000537164 ACTN4O43707 911 aaKnown RBP18.66■□□□□ 0.58
SFSWAP-205ENST00000537164 PRPF6O94906 941 aaKnown RBP18.66■□□□□ 0.58
SFSWAP-205ENST00000537164 ABLIM3O94929 683 aa18.66■□□□□ 0.58
SFSWAP-205ENST00000537164 IL18RAPO95256 599 aa18.66■□□□□ 0.58
SFSWAP-205ENST00000537164 MCM4P33991 863 aa18.66■□□□□ 0.58
SFSWAP-205ENST00000537164 HOXD13P35453 343 aa18.66■□□□□ 0.58
SFSWAP-205ENST00000537164 TMEM132DQ14C87 1099 aa18.66■□□□□ 0.58
SFSWAP-205ENST00000537164 SYCP3Q8IZU3 236 aa18.66■□□□□ 0.58
SFSWAP-205ENST00000537164 TMEM130Q8N3G9 435 aa18.66■□□□□ 0.58
SFSWAP-205ENST00000537164 GLIS3Q8NEA6 775 aa18.66■□□□□ 0.58
SFSWAP-205ENST00000537164 APPL2Q8NEU8 664 aa18.66■□□□□ 0.58
SFSWAP-205ENST00000537164 ZNF461Q8TAF7 563 aa18.66■□□□□ 0.58
SFSWAP-205ENST00000537164 ZNF507Q8TCN5 953 aa18.66■□□□□ 0.58
SFSWAP-205ENST00000537164 EDAQ92838 391 aa18.66■□□□□ 0.58
SFSWAP-205ENST00000537164 LRFN3Q9BTN0 628 aa18.66■□□□□ 0.58
SFSWAP-205ENST00000537164 USP25Q9UHP3 1055 aa18.66■□□□□ 0.58
SFSWAP-205ENST00000537164 PCDHB8Q9UN66 801 aa18.66■□□□□ 0.58
SFSWAP-205ENST00000537164 DOCK6Q96HP0 2047 aa18.66■□□□□ 0.58
SFSWAP-205ENST00000537164 TSC2P49815 1807 aa18.65■□□□□ 0.58
SFSWAP-205ENST00000537164 PRR33A8MZF0 331 aa18.65■□□□□ 0.58
SFSWAP-205ENST00000537164 PIRO00625 290 aa18.65■□□□□ 0.58
SFSWAP-205ENST00000537164 OAZ2O95190 189 aa18.65■□□□□ 0.58
SFSWAP-205ENST00000537164 NFICP08651 508 aa18.65■□□□□ 0.58
SFSWAP-205ENST00000537164 FAM26FQ5R3K3 315 aa18.65■□□□□ 0.58
SFSWAP-205ENST00000537164 OTOP3Q7RTS5 596 aa18.65■□□□□ 0.58
SFSWAP-205ENST00000537164 BRSK2Q8IWQ3 736 aa18.65■□□□□ 0.58
SFSWAP-205ENST00000537164 SMG7Q92540 1137 aaKnown RBP18.65■□□□□ 0.58
SFSWAP-205ENST00000537164 HPS3Q969F9 1004 aa18.65■□□□□ 0.58
SFSWAP-205ENST00000537164 FAM212AQ96EL1 285 aa18.65■□□□□ 0.58
SFSWAP-205ENST00000537164 CHAMP1Q96JM3 812 aa18.65■□□□□ 0.58
SFSWAP-205ENST00000537164 TSHZ2Q9NRE2 1034 aa18.65■□□□□ 0.58
SFSWAP-205ENST00000537164 C8AP07357 584 aa18.64■□□□□ 0.57
SFSWAP-205ENST00000537164 PFKFB1P16118 471 aa18.64■□□□□ 0.57
SFSWAP-205ENST00000537164 GUCY2FP51841 1108 aa18.64■□□□□ 0.57
SFSWAP-205ENST00000537164 LILRA4P59901 499 aa18.64■□□□□ 0.57
SFSWAP-205ENST00000537164 ZXDAP98168 799 aa18.64■□□□□ 0.57
SFSWAP-205ENST00000537164 ROR1Q01973 937 aa18.64■□□□□ 0.57
SFSWAP-205ENST00000537164 CUL4BQ13620 913 aa18.64■□□□□ 0.57
SFSWAP-205ENST00000537164 PTPN21Q16825 1174 aa18.64■□□□□ 0.57
SFSWAP-205ENST00000537164 LIN9Q5TKA1 542 aa18.64■□□□□ 0.57
SFSWAP-205ENST00000537164 C9orf57Q5W0N0 161 aa18.64■□□□□ 0.57
SFSWAP-205ENST00000537164 CEP57L1Q8IYX8 460 aa18.64■□□□□ 0.57
SFSWAP-205ENST00000537164 TDRD5Q8NAT2 981 aaKnown RBP18.64■□□□□ 0.57
SFSWAP-205ENST00000537164 ZSWIM2Q8NEG5 633 aa18.64■□□□□ 0.57
SFSWAP-205ENST00000537164 ACSF2Q96CM8 615 aaPredicted RBP18.64■□□□□ 0.57
SFSWAP-205ENST00000537164 CBWD1Q9BRT8 395 aa18.64■□□□□ 0.57
SFSWAP-205ENST00000537164 FAM213AQ9BRX8 229 aa18.64■□□□□ 0.57
SFSWAP-205ENST00000537164 OXCT2Q9BYC2 517 aaPredicted RBP18.64■□□□□ 0.57
SFSWAP-205ENST00000537164 SERTAD1Q9UHV2 236 aa18.64■□□□□ 0.57
SFSWAP-205ENST00000537164 FBXL5Q9UKA1 691 aa18.64■□□□□ 0.57
SFSWAP-205ENST00000537164 MAFFQ9ULX9 164 aa18.64■□□□□ 0.57
SFSWAP-205ENST00000537164 CLUHO75153 1309 aa18.64■□□□□ 0.57
SFSWAP-205ENST00000537164 UBE4BO95155 1302 aa18.64■□□□□ 0.57
SFSWAP-205ENST00000537164 NOTCH4Q99466 2003 aa18.63■□□□□ 0.57
SFSWAP-205ENST00000537164 A0A1B0GVL5 298 aa18.63■□□□□ 0.57
SFSWAP-205ENST00000537164 A0A1W2PQ27 194 aa18.63■□□□□ 0.57
SFSWAP-205ENST00000537164 A0A1W2PQ64 194 aa18.63■□□□□ 0.57
SFSWAP-205ENST00000537164 A0A1W2PQD8 194 aa18.63■□□□□ 0.57
SFSWAP-205ENST00000537164 WDR27A2RRH5 827 aa18.63■□□□□ 0.57
SFSWAP-205ENST00000537164 PPEF2O14830 753 aa18.63■□□□□ 0.57
SFSWAP-205ENST00000537164 EXTL3O43909 919 aa18.63■□□□□ 0.57
SFSWAP-205ENST00000537164 MYL1P05976 194 aa18.63■□□□□ 0.57
SFSWAP-205ENST00000537164 ATF2P15336 505 aa18.63■□□□□ 0.57
SFSWAP-205ENST00000537164 SP100P23497 879 aaPredicted RBP18.63■□□□□ 0.57
SFSWAP-205ENST00000537164 CASP1P29466 404 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms