RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 ERVK-9P63128 1117 aa12.33□□□□□ -0.44
USP35-207ENST00000530546 BYSLQ13895 437 aaKnown RBP12.33□□□□□ -0.44
USP35-207ENST00000530546 LLGL1Q15334 1064 aa12.33□□□□□ -0.44
USP35-207ENST00000530546 TMEM63BQ5T3F8 832 aa12.33□□□□□ -0.44
USP35-207ENST00000530546 MAATS1Q7Z4T9 603 aa12.33□□□□□ -0.44
USP35-207ENST00000530546 ANKRD13AQ8IZ07 590 aa12.33□□□□□ -0.44
USP35-207ENST00000530546 LRRC71Q8N4P6 559 aa12.33□□□□□ -0.44
USP35-207ENST00000530546 ALG3Q92685 438 aa12.33□□□□□ -0.44
USP35-207ENST00000530546 KRT35Q92764 455 aa12.33□□□□□ -0.44
USP35-207ENST00000530546 TBC1D31Q96DN5 1066 aa12.33□□□□□ -0.44
USP35-207ENST00000530546 STAMBPL1Q96FJ0 436 aa12.33□□□□□ -0.44
USP35-207ENST00000530546 TCHPQ9BT92 498 aa12.33□□□□□ -0.44
USP35-207ENST00000530546 AZI2Q9H6S1 392 aa12.33□□□□□ -0.44
USP35-207ENST00000530546 RBAKQ9NYW8 714 aaPredicted RBP12.33□□□□□ -0.44
USP35-207ENST00000530546 NOP53Q9NZM5 478 aaKnown RBP12.33□□□□□ -0.44
USP35-207ENST00000530546 PLAAQ9Y263 795 aa12.33□□□□□ -0.44
USP35-207ENST00000530546 SH3BP1Q9Y3L3 701 aa12.33□□□□□ -0.44
USP35-207ENST00000530546 TTLL13PA6NNM8 815 aa12.33□□□□□ -0.44
USP35-207ENST00000530546 NOP56O00567 594 aaKnown RBP12.33□□□□□ -0.44
USP35-207ENST00000530546 PMM2O15305 246 aa12.33□□□□□ -0.44
USP35-207ENST00000530546 HLA-DRAP01903 254 aa12.33□□□□□ -0.44
USP35-207ENST00000530546 ARL2P36404 184 aa12.33□□□□□ -0.44
USP35-207ENST00000530546 CAPSQ13938 189 aa12.33□□□□□ -0.44
USP35-207ENST00000530546 QPCTQ16769 361 aa12.33□□□□□ -0.44
USP35-207ENST00000530546 HSDL1Q3SXM5 330 aa12.33□□□□□ -0.44
USP35-207ENST00000530546 C2CD6Q53TS8 623 aa12.33□□□□□ -0.44
USP35-207ENST00000530546 EAPPQ56P03 285 aaPredicted RBP12.33□□□□□ -0.44
USP35-207ENST00000530546 FAM160B1Q5W0V3 765 aa12.33□□□□□ -0.44
USP35-207ENST00000530546 HIBCHQ6NVY1 386 aaPredicted RBP12.33□□□□□ -0.44
USP35-207ENST00000530546 FBXO16Q8IX29 292 aaPredicted RBP12.33□□□□□ -0.44
USP35-207ENST00000530546 PRPF31Q8WWY3 499 aaKnown RBP12.33□□□□□ -0.44
USP35-207ENST00000530546 PSPC1Q8WXF1 523 aaKnown RBP12.33□□□□□ -0.44
USP35-207ENST00000530546 SEPT1Q8WYJ6 367 aa12.33□□□□□ -0.44
USP35-207ENST00000530546 COPS5Q92905 334 aa12.33□□□□□ -0.44
USP35-207ENST00000530546 ZBTB10Q96DT7 871 aa12.33□□□□□ -0.44
USP35-207ENST00000530546 TRIM31Q9BZY9 425 aa12.33□□□□□ -0.44
USP35-207ENST00000530546 AHCYL1O43865 530 aa12.32□□□□□ -0.44
USP35-207ENST00000530546 ANP32DO95626 131 aa12.32□□□□□ -0.44
USP35-207ENST00000530546 FESP07332 822 aa12.32□□□□□ -0.44
USP35-207ENST00000530546 PEX19P40855 299 aa12.32□□□□□ -0.44
USP35-207ENST00000530546 WDR44Q5JSH3 913 aa12.32□□□□□ -0.44
USP35-207ENST00000530546 TDRD10Q5VZ19 366 aaKnown RBP12.32□□□□□ -0.44
USP35-207ENST00000530546 OPTNQ96CV9 577 aa12.32□□□□□ -0.44
USP35-207ENST00000530546 NUP85Q9BW27 656 aa12.32□□□□□ -0.44
USP35-207ENST00000530546 TAF1DQ9H5J8 278 aaPredicted RBP12.32□□□□□ -0.44
USP35-207ENST00000530546 RBPJLQ9UBG7 517 aa12.32□□□□□ -0.44
USP35-207ENST00000530546 MYH9P35579 1960 aaKnown RBP12.32□□□□□ -0.44
USP35-207ENST00000530546 TTI1O43156 1089 aa12.32□□□□□ -0.44
USP35-207ENST00000530546 LUC7L3O95232 432 aaKnown RBP12.32□□□□□ -0.44
USP35-207ENST00000530546 COMTP21964 271 aa12.32□□□□□ -0.44
USP35-207ENST00000530546 EDNRBP24530 442 aa12.32□□□□□ -0.44
USP35-207ENST00000530546 GTF2H1P32780 548 aa12.32□□□□□ -0.44
USP35-207ENST00000530546 CDR2Q01850 454 aa12.32□□□□□ -0.44
USP35-207ENST00000530546 PPP1R7Q15435 360 aa12.32□□□□□ -0.44
USP35-207ENST00000530546 AGBL2Q5U5Z8 902 aa12.32□□□□□ -0.44
USP35-207ENST00000530546 RASGEF1CQ8N431 466 aa12.32□□□□□ -0.44
USP35-207ENST00000530546 TRAPPC12Q8WVT3 735 aa12.32□□□□□ -0.44
USP35-207ENST00000530546 THOC1Q96FV9 657 aaKnown RBP12.32□□□□□ -0.44
USP35-207ENST00000530546 NIFKQ9BYG3 293 aaKnown RBP12.32□□□□□ -0.44
USP35-207ENST00000530546 DPH5Q9H2P9 285 aa12.32□□□□□ -0.44
USP35-207ENST00000530546 LCTP09848 1927 aa12.31□□□□□ -0.44
USP35-207ENST00000530546 IGKV6D-21A0A0A0MT36 114 aa12.31□□□□□ -0.44
USP35-207ENST00000530546 RPS6KA3P51812 740 aa12.31□□□□□ -0.44
USP35-207ENST00000530546 PPP2R2AP63151 447 aa12.31□□□□□ -0.44
USP35-207ENST00000530546 KCTD2Q14681 263 aa12.31□□□□□ -0.44
USP35-207ENST00000530546 PSMD6Q15008 389 aa12.31□□□□□ -0.44
USP35-207ENST00000530546 SCARA3Q6AZY7 606 aa12.31□□□□□ -0.44
USP35-207ENST00000530546 METTL7BQ6UX53 244 aa12.31□□□□□ -0.44
USP35-207ENST00000530546 ANKS4BQ8N8V4 417 aa12.31□□□□□ -0.44
USP35-207ENST00000530546 SPDYE1Q8NFV5 336 aaPredicted RBP12.31□□□□□ -0.44
USP35-207ENST00000530546 ZNF564Q8TBZ8 553 aaPredicted RBP12.31□□□□□ -0.44
USP35-207ENST00000530546 L3MBTL3Q96JM7 780 aaPredicted RBP12.31□□□□□ -0.44
USP35-207ENST00000530546 MMP19Q99542 508 aa12.31□□□□□ -0.44
USP35-207ENST00000530546 SLC12A4Q9UP95 1085 aa12.31□□□□□ -0.44
USP35-207ENST00000530546 WDR81Q562E7 1941 aa12.31□□□□□ -0.44
USP35-207ENST00000530546 SPDYE5A6NIY4 337 aa12.31□□□□□ -0.44
USP35-207ENST00000530546 CCT8L1PA6NM43 557 aa12.31□□□□□ -0.44
USP35-207ENST00000530546 YBX3P16989 372 aaKnown RBP eCLIP12.31□□□□□ -0.44
USP35-207ENST00000530546 LLGL2Q6P1M3 1020 aa12.31□□□□□ -0.44
USP35-207ENST00000530546 CPLX4Q7Z7G2 160 aa12.31□□□□□ -0.44
USP35-207ENST00000530546 CCDC63Q8NA47 563 aa12.31□□□□□ -0.44
USP35-207ENST00000530546 OR5B17Q8NGF7 314 aa12.31□□□□□ -0.44
USP35-207ENST00000530546 CPA5Q8WXQ8 436 aa12.31□□□□□ -0.44
USP35-207ENST00000530546 UPF1Q92900 1129 aaKnown RBP eCLIP12.31□□□□□ -0.44
USP35-207ENST00000530546 ZNF408Q9H9D4 720 aa12.31□□□□□ -0.44
USP35-207ENST00000530546 KIAA1586Q9HCI6 787 aa12.31□□□□□ -0.44
USP35-207ENST00000530546 AGTPBP1Q9UPW5 1226 aa12.31□□□□□ -0.44
USP35-207ENST00000530546 SPOPO43791 374 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 GJB1P08034 283 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 ALADP13716 330 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 RFC5P40937 340 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 MKRN3Q13064 507 aaKnown RBP12.3□□□□□ -0.44
USP35-207ENST00000530546 MKRN4PQ13434 485 aaPredicted RBP12.3□□□□□ -0.44
USP35-207ENST00000530546 TARBP2Q15633 366 aaKnown RBP12.3□□□□□ -0.44
USP35-207ENST00000530546 ZACNQ401N2 412 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 CDR2LQ86X02 465 aaPredicted RBP12.3□□□□□ -0.44
USP35-207ENST00000530546 PASD1Q8IV76 773 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 LRRC45Q96CN5 670 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 ANKRD27Q96NW4 1050 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 TRIM51Q9BSJ1 452 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms