RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 SLC32A1Q9H598 525 aa15.35■□□□□ 0.05
NKX3-1-202ENST00000523261 SLITRK6Q9H5Y7 841 aa15.35■□□□□ 0.05
NKX3-1-202ENST00000523261 CYP3A7-CYP3A51PA0A087WV96 503 aa15.34■□□□□ 0.05
NKX3-1-202ENST00000523261 SLC27A2O14975 620 aa15.34■□□□□ 0.05
NKX3-1-202ENST00000523261 DKC1O60832 514 aaKnown RBP eCLIP15.34■□□□□ 0.05
NKX3-1-202ENST00000523261 RECQL4O94761 1208 aa15.34■□□□□ 0.05
NKX3-1-202ENST00000523261 SEC24BO95487 1268 aa15.34■□□□□ 0.05
NKX3-1-202ENST00000523261 TDP2O95551 362 aa15.34■□□□□ 0.05
NKX3-1-202ENST00000523261 PRKCBP05771 671 aa15.34■□□□□ 0.05
NKX3-1-202ENST00000523261 CYP3A7P24462 503 aa15.34■□□□□ 0.05
NKX3-1-202ENST00000523261 SIM1P81133 766 aaPredicted RBP15.34■□□□□ 0.05
NKX3-1-202ENST00000523261 TNK2Q07912 1038 aa15.34■□□□□ 0.05
NKX3-1-202ENST00000523261 SCAPQ12770 1279 aa15.34■□□□□ 0.05
NKX3-1-202ENST00000523261 TFDP1Q14186 410 aa15.34■□□□□ 0.05
NKX3-1-202ENST00000523261 ARHGAP29Q52LW3 1261 aa15.34■□□□□ 0.05
NKX3-1-202ENST00000523261 GPIHBP1Q8IV16 184 aa15.34■□□□□ 0.05
NKX3-1-202ENST00000523261 CHCHD4Q8N4Q1 142 aa15.34■□□□□ 0.05
NKX3-1-202ENST00000523261 ASAP3Q8TDY4 903 aa15.34■□□□□ 0.05
NKX3-1-202ENST00000523261 MTRQ99707 1265 aa15.34■□□□□ 0.05
NKX3-1-202ENST00000523261 MKNK1Q9BUB5 465 aa15.34■□□□□ 0.05
NKX3-1-202ENST00000523261 NFKBIZQ9BYH8 718 aa15.34■□□□□ 0.05
NKX3-1-202ENST00000523261 ASAH2Q9NR71 780 aa15.34■□□□□ 0.05
NKX3-1-202ENST00000523261 TENM4Q6N022 2769 aa15.34■□□□□ 0.05
NKX3-1-202ENST00000523261 H0Y626 953 aa15.33■□□□□ 0.04
NKX3-1-202ENST00000523261 MEFVO15553 781 aaPredicted RBP15.33■□□□□ 0.04
NKX3-1-202ENST00000523261 TRIM16O95361 564 aa15.33■□□□□ 0.04
NKX3-1-202ENST00000523261 P4HBP07237 508 aaKnown RBP15.33■□□□□ 0.04
NKX3-1-202ENST00000523261 YWHABP31946 246 aaKnown RBP15.33■□□□□ 0.04
NKX3-1-202ENST00000523261 BRCC3P46736 316 aa15.33■□□□□ 0.04
NKX3-1-202ENST00000523261 CLCNKBP51801 687 aa15.33■□□□□ 0.04
NKX3-1-202ENST00000523261 ARPP19P56211 112 aa15.33■□□□□ 0.04
NKX3-1-202ENST00000523261 TMEM196Q5HYL7 178 aa15.33■□□□□ 0.04
NKX3-1-202ENST00000523261 TTC22Q5TAA0 569 aa15.33■□□□□ 0.04
NKX3-1-202ENST00000523261 PMS2CLQ68D20 193 aa15.33■□□□□ 0.04
NKX3-1-202ENST00000523261 FSTL4Q6MZW2 842 aa15.33■□□□□ 0.04
NKX3-1-202ENST00000523261 PIP4P1Q86T03 277 aa15.33■□□□□ 0.04
NKX3-1-202ENST00000523261 ARID3BQ8IVW6 561 aaPredicted RBP15.33■□□□□ 0.04
NKX3-1-202ENST00000523261 C3orf58Q8NDZ4 430 aa15.33■□□□□ 0.04
NKX3-1-202ENST00000523261 TBCKQ8TEA7 893 aa15.33■□□□□ 0.04
NKX3-1-202ENST00000523261 KALRNO60229 2985 aa15.32■□□□□ 0.04
NKX3-1-202ENST00000523261 CCDC194A0A1B0GVG4 234 aa15.32■□□□□ 0.04
NKX3-1-202ENST00000523261 ZBTB39O15060 712 aa15.32■□□□□ 0.04
NKX3-1-202ENST00000523261 TBX3O15119 743 aa15.32■□□□□ 0.04
NKX3-1-202ENST00000523261 TRAPPC3O43617 180 aa15.32■□□□□ 0.04
NKX3-1-202ENST00000523261 ADD1P35611 737 aaKnown RBP15.32■□□□□ 0.04
NKX3-1-202ENST00000523261 CACNB1Q02641 598 aaPredicted RBP15.32■□□□□ 0.04
NKX3-1-202ENST00000523261 TWF1Q12792 350 aa15.32■□□□□ 0.04
NKX3-1-202ENST00000523261 PPP2R5CQ13362 524 aa15.32■□□□□ 0.04
NKX3-1-202ENST00000523261 XKR9Q5GH70 373 aa15.32■□□□□ 0.04
NKX3-1-202ENST00000523261 STXBP5Q5T5C0 1151 aa15.32■□□□□ 0.04
NKX3-1-202ENST00000523261 TPGS2Q68CL5 300 aa15.32■□□□□ 0.04
NKX3-1-202ENST00000523261 HAUS6Q7Z4H7 955 aa15.32■□□□□ 0.04
NKX3-1-202ENST00000523261 RAB44Q7Z6P3 723 aaPredicted RBP15.32■□□□□ 0.04
NKX3-1-202ENST00000523261 C4orf19Q8IY42 314 aa15.32■□□□□ 0.04
NKX3-1-202ENST00000523261 HNRNPLLQ8WVV9 542 aaKnown RBP15.32■□□□□ 0.04
NKX3-1-202ENST00000523261 LRRC3Q9BY71 257 aa15.32■□□□□ 0.04
NKX3-1-202ENST00000523261 RWDD1Q9H446 243 aaPredicted RBP15.32■□□□□ 0.04
NKX3-1-202ENST00000523261 EBF1Q9UH73 591 aa15.32■□□□□ 0.04
NKX3-1-202ENST00000523261 VAV3Q9UKW4 847 aa15.32■□□□□ 0.04
NKX3-1-202ENST00000523261 THADAQ6YHU6 1953 aa15.32■□□□□ 0.04
NKX3-1-202ENST00000523261 A0A1W2PRU2 124 aa15.31■□□□□ 0.04
NKX3-1-202ENST00000523261 RNF40O75150 1001 aa15.31■□□□□ 0.04
NKX3-1-202ENST00000523261 IGHDP01880 384 aa15.31■□□□□ 0.04
NKX3-1-202ENST00000523261 GBP1P32455 592 aa15.31■□□□□ 0.04
NKX3-1-202ENST00000523261 UPP1Q16831 310 aa15.31■□□□□ 0.04
NKX3-1-202ENST00000523261 OTUD6AQ7L8S5 288 aa15.31■□□□□ 0.04
NKX3-1-202ENST00000523261 CYP2U1Q7Z449 544 aa15.31■□□□□ 0.04
NKX3-1-202ENST00000523261 LRIG1Q96JA1 1093 aa15.31■□□□□ 0.04
NKX3-1-202ENST00000523261 TCEANC2Q96MN5 208 aa15.31■□□□□ 0.04
NKX3-1-202ENST00000523261 PPP1R10Q96QC0 940 aaKnown RBP15.31■□□□□ 0.04
NKX3-1-202ENST00000523261 LXNQ9BS40 222 aa15.31■□□□□ 0.04
NKX3-1-202ENST00000523261 EVLQ9UI08 416 aaPredicted RBP15.31■□□□□ 0.04
NKX3-1-202ENST00000523261 NUP210Q8TEM1 1887 aaPredicted RBP15.31■□□□□ 0.04
NKX3-1-202ENST00000523261 KLF18A0A0U1RQI7 1052 aa15.3■□□□□ 0.04
NKX3-1-202ENST00000523261 TTLL13PA6NNM8 815 aa15.3■□□□□ 0.04
NKX3-1-202ENST00000523261 UPK3BL1B0FP48 263 aa15.3■□□□□ 0.04
NKX3-1-202ENST00000523261 UPK3BL2E5RIL1 263 aa15.3■□□□□ 0.04
NKX3-1-202ENST00000523261 APBB3O95704 486 aa15.3■□□□□ 0.04
NKX3-1-202ENST00000523261 GLRA2P23416 452 aa15.3■□□□□ 0.04
NKX3-1-202ENST00000523261 RDXP35241 583 aaKnown RBP15.3■□□□□ 0.04
NKX3-1-202ENST00000523261 ARL2P36404 184 aa15.3■□□□□ 0.04
NKX3-1-202ENST00000523261 RCAN1P53805 252 aa15.3■□□□□ 0.04
NKX3-1-202ENST00000523261 PLCB2Q00722 1185 aa15.3■□□□□ 0.04
NKX3-1-202ENST00000523261 GRSF1Q12849 480 aaKnown RBP eCLIP15.3■□□□□ 0.04
NKX3-1-202ENST00000523261 SEMA3BQ13214 749 aa15.3■□□□□ 0.04
NKX3-1-202ENST00000523261 ITPRIPL2Q3MIP1 535 aa15.3■□□□□ 0.04
NKX3-1-202ENST00000523261 CREB3L3Q68CJ9 461 aa15.3■□□□□ 0.04
NKX3-1-202ENST00000523261 TMC8Q8IU68 726 aa15.3■□□□□ 0.04
NKX3-1-202ENST00000523261 CHFRQ96EP1 664 aa15.3■□□□□ 0.04
NKX3-1-202ENST00000523261 GOLGA2P5Q9HBQ8 144 aa15.3■□□□□ 0.04
NKX3-1-202ENST00000523261 OBP2AQ9NY56 170 aa15.3■□□□□ 0.04
NKX3-1-202ENST00000523261 FBXL5Q9UKA1 691 aa15.3■□□□□ 0.04
NKX3-1-202ENST00000523261 INVSQ9Y283 1065 aa15.3■□□□□ 0.04
NKX3-1-202ENST00000523261 DPYSL4O14531 572 aa15.29■□□□□ 0.04
NKX3-1-202ENST00000523261 TRDMT1O14717 391 aaKnown RBP15.29■□□□□ 0.04
NKX3-1-202ENST00000523261 PRPF3O43395 683 aaKnown RBP15.29■□□□□ 0.04
NKX3-1-202ENST00000523261 EGFP01133 1207 aa15.29■□□□□ 0.04
NKX3-1-202ENST00000523261 FAM193AP78312 1265 aa15.29■□□□□ 0.04
NKX3-1-202ENST00000523261 EXOSC10Q01780 885 aaKnown RBP15.29■□□□□ 0.04
NKX3-1-202ENST00000523261 C19orf57Q0VDD7 668 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms