RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 Q9Y3F1 56 aa18.03■□□□□ 0.48
SREK1-212ENST00000522912 TRIP11Q15643 1979 aa18.03■□□□□ 0.48
SREK1-212ENST00000522912 SMIM35A0A1B0GVV1 85 aa18.03■□□□□ 0.48
SREK1-212ENST00000522912 CA12O43570 354 aa18.03■□□□□ 0.48
SREK1-212ENST00000522912 CEP104O60308 925 aa18.03■□□□□ 0.48
SREK1-212ENST00000522912 CYP1A1P04798 512 aaPredicted RBP18.03■□□□□ 0.48
SREK1-212ENST00000522912 GNA15P30679 374 aa18.03■□□□□ 0.48
SREK1-212ENST00000522912 C11orf63Q6NUN7 778 aa18.03■□□□□ 0.48
SREK1-212ENST00000522912 USP38Q8NB14 1042 aa18.03■□□□□ 0.48
SREK1-212ENST00000522912 TRPV1Q8NER1 839 aa18.03■□□□□ 0.48
SREK1-212ENST00000522912 HNRNPLLQ8WVV9 542 aaKnown RBP18.03■□□□□ 0.48
SREK1-212ENST00000522912 CPA5Q8WXQ8 436 aa18.03■□□□□ 0.48
SREK1-212ENST00000522912 CYFIP2Q96F07 1278 aa18.03■□□□□ 0.48
SREK1-212ENST00000522912 CALR3Q96L12 384 aaKnown RBP18.03■□□□□ 0.48
SREK1-212ENST00000522912 NUP85Q9BW27 656 aa18.03■□□□□ 0.48
SREK1-212ENST00000522912 ARHGAP39Q9C0H5 1083 aa18.03■□□□□ 0.48
SREK1-212ENST00000522912 GINS2Q9Y248 185 aa18.03■□□□□ 0.48
SREK1-212ENST00000522912 ALG6Q9Y672 507 aa18.03■□□□□ 0.48
SREK1-212ENST00000522912 SPDYE4A6NLX3 237 aa18.02■□□□□ 0.48
SREK1-212ENST00000522912 TUBBP07437 444 aa18.02■□□□□ 0.48
SREK1-212ENST00000522912 CYP2C9P11712 490 aa18.02■□□□□ 0.48
SREK1-212ENST00000522912 SSTR3P32745 418 aaPredicted RBP18.02■□□□□ 0.48
SREK1-212ENST00000522912 POU5F1Q01860 360 aaKnown RBP18.02■□□□□ 0.48
SREK1-212ENST00000522912 ZNF699Q32M78 642 aa18.02■□□□□ 0.48
SREK1-212ENST00000522912 C1orf127Q8N9H9 656 aa18.02■□□□□ 0.48
SREK1-212ENST00000522912 HDAC7Q8WUI4 952 aa18.02■□□□□ 0.48
SREK1-212ENST00000522912 DCAF8L1A6NGE4 600 aa18.01■□□□□ 0.47
SREK1-212ENST00000522912 ZMYND10O75800 440 aa18.01■□□□□ 0.47
SREK1-212ENST00000522912 TBC1D8O95759 1140 aa18.01■□□□□ 0.47
SREK1-212ENST00000522912 CD58P19256 250 aa18.01■□□□□ 0.47
SREK1-212ENST00000522912 HOXA11P31270 313 aaPredicted RBP18.01■□□□□ 0.47
SREK1-212ENST00000522912 ASPAP45381 313 aa18.01■□□□□ 0.47
SREK1-212ENST00000522912 MRPS25P82663 173 aaKnown RBP18.01■□□□□ 0.47
SREK1-212ENST00000522912 ZNF200P98182 395 aaPredicted RBP18.01■□□□□ 0.47
SREK1-212ENST00000522912 LONRF2Q1L5Z9 754 aa18.01■□□□□ 0.47
SREK1-212ENST00000522912 BEND6Q5SZJ8 279 aaPredicted RBP18.01■□□□□ 0.47
SREK1-212ENST00000522912 NAA35Q5VZE5 725 aa18.01■□□□□ 0.47
SREK1-212ENST00000522912 MCOLN2Q8IZK6 566 aa18.01■□□□□ 0.47
SREK1-212ENST00000522912 CXorf38Q8TB03 319 aa18.01■□□□□ 0.47
SREK1-212ENST00000522912 ZNF564Q8TBZ8 553 aaPredicted RBP18.01■□□□□ 0.47
SREK1-212ENST00000522912 ACTRT1Q8TDG2 376 aa18.01■□□□□ 0.47
SREK1-212ENST00000522912 SELENOOQ9BVL4 669 aa18.01■□□□□ 0.47
SREK1-212ENST00000522912 CISHQ9NSE2 258 aa18.01■□□□□ 0.47
SREK1-212ENST00000522912 FAM53CQ9NYF3 392 aa18.01■□□□□ 0.47
SREK1-212ENST00000522912 POLIQ9UNA4 740 aa18.01■□□□□ 0.47
SREK1-212ENST00000522912 TMEM110-MUSTN1A8MSY1 372 aa18.01■□□□□ 0.47
SREK1-212ENST00000522912 WEE2P0C1S8 567 aa18.01■□□□□ 0.47
SREK1-212ENST00000522912 CENPCQ03188 943 aa18.01■□□□□ 0.47
SREK1-212ENST00000522912 FSCN1Q16658 493 aaKnown RBP18.01■□□□□ 0.47
SREK1-212ENST00000522912 DCAF12L1Q5VU92 463 aa18.01■□□□□ 0.47
SREK1-212ENST00000522912 SCARA5Q6ZMJ2 495 aa18.01■□□□□ 0.47
SREK1-212ENST00000522912 RASGEF1CQ8N431 466 aa18.01■□□□□ 0.47
SREK1-212ENST00000522912 DNAJB3Q8WWF6 145 aa18.01■□□□□ 0.47
SREK1-212ENST00000522912 BTBD6Q96KE9 485 aa18.01■□□□□ 0.47
SREK1-212ENST00000522912 OSMRQ99650 979 aa18.01■□□□□ 0.47
SREK1-212ENST00000522912 GCOM2Q9BZD3 368 aaPredicted RBP18.01■□□□□ 0.47
SREK1-212ENST00000522912 ASB7Q9H672 318 aa18.01■□□□□ 0.47
SREK1-212ENST00000522912 CNOT8Q9UFF9 292 aaKnown RBP18.01■□□□□ 0.47
SREK1-212ENST00000522912 DMGDHQ9UI17 866 aaKnown RBP18.01■□□□□ 0.47
SREK1-212ENST00000522912 TMEM59LQ9UK28 342 aa18.01■□□□□ 0.47
SREK1-212ENST00000522912 TREHO43280 583 aa18■□□□□ 0.47
SREK1-212ENST00000522912 THAP12O43422 761 aa18■□□□□ 0.47
SREK1-212ENST00000522912 SASH3O75995 380 aa18■□□□□ 0.47
SREK1-212ENST00000522912 KRT19P08727 400 aa18■□□□□ 0.47
SREK1-212ENST00000522912 NOMO3P69849 1222 aa18■□□□□ 0.47
SREK1-212ENST00000522912 MESDQ14696 234 aa18■□□□□ 0.47
SREK1-212ENST00000522912 KYAT1Q16773 422 aa18■□□□□ 0.47
SREK1-212ENST00000522912 PASD1Q8IV76 773 aa18■□□□□ 0.47
SREK1-212ENST00000522912 ZNF606Q8WXB4 792 aa18■□□□□ 0.47
SREK1-212ENST00000522912 HINFPQ9BQA5 517 aa18■□□□□ 0.47
SREK1-212ENST00000522912 UVRAGQ9P2Y5 699 aa18■□□□□ 0.47
SREK1-212ENST00000522912 GABRQQ9UN88 632 aa18■□□□□ 0.47
SREK1-212ENST00000522912 MROH7Q68CQ1 1323 aa18■□□□□ 0.47
SREK1-212ENST00000522912 MYADML2A6NDP7 307 aa17.99■□□□□ 0.47
SREK1-212ENST00000522912 ERLIN1O75477 346 aa17.99■□□□□ 0.47
SREK1-212ENST00000522912 AKR1A1P14550 325 aa17.99■□□□□ 0.47
SREK1-212ENST00000522912 PSMC4P43686 418 aa17.99■□□□□ 0.47
SREK1-212ENST00000522912 CDC42EP1Q00587 391 aa17.99■□□□□ 0.47
SREK1-212ENST00000522912 TRIM72Q6ZMU5 477 aa17.99■□□□□ 0.47
SREK1-212ENST00000522912 MON1BQ7L1V2 547 aa17.99■□□□□ 0.47
SREK1-212ENST00000522912 CPNE8Q86YQ8 564 aa17.99■□□□□ 0.47
SREK1-212ENST00000522912 ACAP3Q96P50 834 aa17.99■□□□□ 0.47
SREK1-212ENST00000522912 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.99■□□□□ 0.478e-9■■□□□ 12.5
SREK1-212ENST00000522912 ADPGKQ9BRR6 497 aa17.99■□□□□ 0.47
SREK1-212ENST00000522912 FUT8Q9BYC5 575 aa17.99■□□□□ 0.47
SREK1-212ENST00000522912 NOC2LQ9Y3T9 749 aaKnown RBP17.99■□□□□ 0.47
SREK1-212ENST00000522912 NPTXRO95502 500 aa17.99■□□□□ 0.47
SREK1-212ENST00000522912 ITGB3P05106 788 aa17.99■□□□□ 0.47
SREK1-212ENST00000522912 DARSP14868 501 aaKnown RBP17.99■□□□□ 0.47
SREK1-212ENST00000522912 COMTP21964 271 aa17.99■□□□□ 0.47
SREK1-212ENST00000522912 PURAQ00577 322 aaKnown RBP17.99■□□□□ 0.47
SREK1-212ENST00000522912 SLC7A5Q01650 507 aa17.99■□□□□ 0.47
SREK1-212ENST00000522912 C2CD6Q53TS8 623 aa17.99■□□□□ 0.47
SREK1-212ENST00000522912 CCDC70Q6NSX1 233 aa17.99■□□□□ 0.47
SREK1-212ENST00000522912 CYP4F22Q6NT55 531 aa17.99■□□□□ 0.47
SREK1-212ENST00000522912 CATSPER4Q7RTX7 472 aa17.99■□□□□ 0.47
SREK1-212ENST00000522912 ALG3Q92685 438 aa17.99■□□□□ 0.47
SREK1-212ENST00000522912 ZSWIM1Q9BR11 485 aa17.99■□□□□ 0.47
SREK1-212ENST00000522912 OGFRQ9NZT2 677 aa17.99■□□□□ 0.47
SREK1-212ENST00000522912 NXF1Q9UBU9 619 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms