RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 TUBA3CQ13748 450 aa5.87□□□□□ -1.47
HMGB1P1-201ENST00000522557 PLS1Q14651 629 aa5.87□□□□□ -1.47
HMGB1P1-201ENST00000522557 RAB39AQ14964 217 aa5.87□□□□□ -1.47
HMGB1P1-201ENST00000522557 TUBA3EQ6PEY2 450 aa5.87□□□□□ -1.47
HMGB1P1-201ENST00000522557 USP51Q70EK9 711 aa5.87□□□□□ -1.47
HMGB1P1-201ENST00000522557 FAM90A1Q86YD7 464 aa5.87□□□□□ -1.47
HMGB1P1-201ENST00000522557 DRC7Q8IY82 874 aa5.87□□□□□ -1.47
HMGB1P1-201ENST00000522557 DCBLD1Q8N8Z6 715 aa5.87□□□□□ -1.47
HMGB1P1-201ENST00000522557 IL31RAQ8NI17 732 aa5.87□□□□□ -1.47
HMGB1P1-201ENST00000522557 CYFIP2Q96F07 1278 aa5.87□□□□□ -1.47
HMGB1P1-201ENST00000522557 APIPQ96GX9 242 aa5.87□□□□□ -1.47
HMGB1P1-201ENST00000522557 FAM167AQ96KS9 214 aa5.87□□□□□ -1.47
HMGB1P1-201ENST00000522557 MRGPRX1Q96LB2 322 aa5.87□□□□□ -1.47
HMGB1P1-201ENST00000522557 SORCS2Q96PQ0 1159 aa5.87□□□□□ -1.47
HMGB1P1-201ENST00000522557 EPC1Q9H2F5 836 aa5.87□□□□□ -1.47
HMGB1P1-201ENST00000522557 SLC2A4RGQ9NR83 387 aa5.87□□□□□ -1.47
HMGB1P1-201ENST00000522557 PARPBPQ9NWS1 579 aa5.87□□□□□ -1.47
HMGB1P1-201ENST00000522557 GPRC5DQ9NZD1 345 aa5.87□□□□□ -1.47
HMGB1P1-201ENST00000522557 CYR61O00622 381 aa5.86□□□□□ -1.47
HMGB1P1-201ENST00000522557 NRP1O14786 923 aa5.86□□□□□ -1.47
HMGB1P1-201ENST00000522557 PRAMEF4O60810 478 aa5.86□□□□□ -1.47
HMGB1P1-201ENST00000522557 FAM20BO75063 409 aa5.86□□□□□ -1.47
HMGB1P1-201ENST00000522557 ZNF202O95125 648 aa5.86□□□□□ -1.47
HMGB1P1-201ENST00000522557 GASTP01350 101 aa5.86□□□□□ -1.47
HMGB1P1-201ENST00000522557 GNAT2P19087 354 aa5.86□□□□□ -1.47
HMGB1P1-201ENST00000522557 PCSK1P29120 753 aa5.86□□□□□ -1.47
HMGB1P1-201ENST00000522557 PIK3CBP42338 1070 aa5.86□□□□□ -1.47
HMGB1P1-201ENST00000522557 ARFIP2P53365 341 aa5.86□□□□□ -1.47
HMGB1P1-201ENST00000522557 TOB2Q14106 344 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P1-201ENST00000522557 ZNF572Q7Z3I7 529 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P1-201ENST00000522557 APBB1IPQ7Z5R6 666 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P1-201ENST00000522557 PARD3BQ8TEW8 1205 aa5.86□□□□□ -1.47
HMGB1P1-201ENST00000522557 PHKBQ93100 1093 aa5.86□□□□□ -1.47
HMGB1P1-201ENST00000522557 CPPED1Q9BRF8 314 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P1-201ENST00000522557 LSM14BQ9BX40 385 aaKnown RBP5.86□□□□□ -1.47
HMGB1P1-201ENST00000522557 DPH1Q9BZG8 443 aa5.86□□□□□ -1.47
HMGB1P1-201ENST00000522557 PCED1AQ9H1Q7 454 aa5.86□□□□□ -1.47
HMGB1P1-201ENST00000522557 KCNH6Q9H252 994 aa5.86□□□□□ -1.47
HMGB1P1-201ENST00000522557 MANSC1Q9H8J5 431 aa5.86□□□□□ -1.47
HMGB1P1-201ENST00000522557 PTPRHQ9HD43 1115 aa5.86□□□□□ -1.47
HMGB1P1-201ENST00000522557 NLRC4Q9NPP4 1024 aa5.86□□□□□ -1.47
HMGB1P1-201ENST00000522557 RGS17Q9UGC6 210 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P1-201ENST00000522557 ZMYM3Q14202 1370 aa5.85□□□□□ -1.47
HMGB1P1-201ENST00000522557 IPO13O94829 963 aaKnown RBP5.85□□□□□ -1.47
HMGB1P1-201ENST00000522557 ARIH2O95376 493 aa5.85□□□□□ -1.47
HMGB1P1-201ENST00000522557 FTH1P19P0C7X4 201 aa5.85□□□□□ -1.47
HMGB1P1-201ENST00000522557 ALOX15P16050 662 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P1-201ENST00000522557 NPR1P16066 1061 aa5.85□□□□□ -1.47
HMGB1P1-201ENST00000522557 ZKSCAN1P17029 563 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P1-201ENST00000522557 MALP21145 153 aa5.85□□□□□ -1.47
HMGB1P1-201ENST00000522557 PRIM2P49643 509 aa5.85□□□□□ -1.47
HMGB1P1-201ENST00000522557 GZMKP49863 264 aa5.85□□□□□ -1.47
HMGB1P1-201ENST00000522557 OS9Q13438 667 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P1-201ENST00000522557 SNAPC2Q13487 334 aa5.85□□□□□ -1.47
HMGB1P1-201ENST00000522557 LONRF1Q17RB8 773 aa5.85□□□□□ -1.47
HMGB1P1-201ENST00000522557 EMC10Q5UCC4 262 aa5.85□□□□□ -1.47
HMGB1P1-201ENST00000522557 HTR3DQ70Z44 454 aa5.85□□□□□ -1.47
HMGB1P1-201ENST00000522557 HEATR3Q7Z4Q2 680 aa5.85□□□□□ -1.47
HMGB1P1-201ENST00000522557 DAAM2Q86T65 1068 aa5.85□□□□□ -1.47
HMGB1P1-201ENST00000522557 XYLT1Q86Y38 959 aa5.85□□□□□ -1.47
HMGB1P1-201ENST00000522557 RHOT1Q8IXI2 618 aa5.85□□□□□ -1.47
HMGB1P1-201ENST00000522557 OR2C3Q8N628 320 aa5.85□□□□□ -1.47
HMGB1P1-201ENST00000522557 RNF152Q8N8N0 203 aa5.85□□□□□ -1.47
HMGB1P1-201ENST00000522557 C3orf20Q8ND61 904 aa5.85□□□□□ -1.47
HMGB1P1-201ENST00000522557 RAB24Q969Q5 203 aa5.85□□□□□ -1.47
HMGB1P1-201ENST00000522557 SLC35A4Q96G79 324 aa5.85□□□□□ -1.47
HMGB1P1-201ENST00000522557 CLPTM1LQ96KA5 538 aa5.85□□□□□ -1.47
HMGB1P1-201ENST00000522557 MSLNLQ96KJ4 702 aa5.85□□□□□ -1.47
HMGB1P1-201ENST00000522557 MMRN2Q9H8L6 949 aa5.85□□□□□ -1.47
HMGB1P1-201ENST00000522557 TDP1Q9NUW8 608 aa5.85□□□□□ -1.47
HMGB1P1-201ENST00000522557 GOLGA6L6A8MZA4 724 aa5.84□□□□□ -1.47
HMGB1P1-201ENST00000522557 PQBP1O60828 265 aaKnown RBP5.84□□□□□ -1.47
HMGB1P1-201ENST00000522557 ITGA10O75578 1167 aa5.84□□□□□ -1.47
HMGB1P1-201ENST00000522557 RPS6KA4O75676 772 aa5.84□□□□□ -1.47
HMGB1P1-201ENST00000522557 TSHRP16473 764 aa5.84□□□□□ -1.47
HMGB1P1-201ENST00000522557 FPR1P21462 350 aa5.84□□□□□ -1.47
HMGB1P1-201ENST00000522557 ADSLP30566 484 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P1-201ENST00000522557 CTXN1P60606 82 aa5.84□□□□□ -1.47
HMGB1P1-201ENST00000522557 APBA1Q02410 837 aa5.84□□□□□ -1.47
HMGB1P1-201ENST00000522557 SP140Q13342 867 aa5.84□□□□□ -1.47
HMGB1P1-201ENST00000522557 KHDC1Q4VXA5 237 aaKnown RBP5.84□□□□□ -1.47
HMGB1P1-201ENST00000522557 DGKKQ5KSL6 1271 aa5.84□□□□□ -1.47
HMGB1P1-201ENST00000522557 FAM180AQ6UWF9 173 aa5.84□□□□□ -1.47
HMGB1P1-201ENST00000522557 SRLQ86TD4 932 aa5.84□□□□□ -1.47
HMGB1P1-201ENST00000522557 DEPTORQ8TB45 409 aa5.84□□□□□ -1.47
HMGB1P1-201ENST00000522557 MRIQ9BWK5 157 aa5.84□□□□□ -1.47
HMGB1P1-201ENST00000522557 CPEB1Q9BZB8 566 aaKnown RBP5.84□□□□□ -1.47
HMGB1P1-201ENST00000522557 NUP62CLQ9H1M0 184 aa5.84□□□□□ -1.47
HMGB1P1-201ENST00000522557 PLCB1Q9NQ66 1216 aa5.84□□□□□ -1.47
HMGB1P1-201ENST00000522557 LANCL2Q9NS86 450 aa5.84□□□□□ -1.47
HMGB1P1-201ENST00000522557 LMBRD1Q9NUN5 540 aa5.84□□□□□ -1.47
HMGB1P1-201ENST00000522557 REXO2Q9Y3B8 237 aaKnown RBP5.84□□□□□ -1.47
HMGB1P1-201ENST00000522557 DAAM1Q9Y4D1 1078 aa5.84□□□□□ -1.47
HMGB1P1-201ENST00000522557 MYBBP1AQ9BQG0 1328 aaKnown RBP5.83□□□□□ -1.48
HMGB1P1-201ENST00000522557 GRXCR1A8MXD5 290 aa5.83□□□□□ -1.48
HMGB1P1-201ENST00000522557 F2RL2O00254 374 aa5.83□□□□□ -1.48
HMGB1P1-201ENST00000522557 PHGDHO43175 533 aaKnown RBP5.83□□□□□ -1.48
HMGB1P1-201ENST00000522557 CREB3O43889 395 aa5.83□□□□□ -1.48
HMGB1P1-201ENST00000522557 GPR32O75388 356 aa5.83□□□□□ -1.48
HMGB1P1-201ENST00000522557 RPLP2P05387 115 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms