RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 HPCAL4Q9UM19 191 aa27.65■■■□□ 2.02
COL13A1-214ENST00000522165 ZSCAN5CA6NGD5 496 aaPredicted RBP27.64■■■□□ 2.02
COL13A1-214ENST00000522165 SART1O43290 800 aaKnown RBP27.64■■■□□ 2.02
COL13A1-214ENST00000522165 TNNC2P02585 160 aa27.64■■■□□ 2.02
COL13A1-214ENST00000522165 CFHP08603 1231 aa27.64■■■□□ 2.02
COL13A1-214ENST00000522165 CXCL8P10145 99 aa27.64■■■□□ 2.02
COL13A1-214ENST00000522165 MCF2P10911 925 aa27.64■■■□□ 2.02
COL13A1-214ENST00000522165 ANKRD36BP1Q96IX9 119 aa27.64■■■□□ 2.02
COL13A1-214ENST00000522165 ACBD3Q9H3P7 528 aa27.64■■■□□ 2.02
COL13A1-214ENST00000522165 PLEKHA4Q9H4M7 779 aa27.64■■■□□ 2.02
COL13A1-214ENST00000522165 ZEB2O60315 1214 aa27.64■■■□□ 2.01
COL13A1-214ENST00000522165 PEX5P50542 639 aa27.64■■■□□ 2.01
COL13A1-214ENST00000522165 ZNF211Q13398 564 aaPredicted RBP27.64■■■□□ 2.01
COL13A1-214ENST00000522165 EMBQ6PCB8 327 aa27.64■■■□□ 2.01
COL13A1-214ENST00000522165 NAP1L3Q99457 506 aaPredicted RBP27.64■■■□□ 2.01
COL13A1-214ENST00000522165 DDX47Q9H0S4 455 aaKnown RBP27.64■■■□□ 2.01
COL13A1-214ENST00000522165 PDZD7Q9H5P4 517 aa27.64■■■□□ 2.01
COL13A1-214ENST00000522165 IGF2BP3O00425 579 aaKnown RBP eCLIP27.63■■■□□ 2.01
COL13A1-214ENST00000522165 ITGBL1O95965 494 aaPredicted RBP27.63■■■□□ 2.01
COL13A1-214ENST00000522165 MARCKSL1P49006 195 aa27.63■■■□□ 2.01
COL13A1-214ENST00000522165 CARSP49589 748 aaKnown RBP27.63■■■□□ 2.01
COL13A1-214ENST00000522165 NOMO3P69849 1222 aa27.63■■■□□ 2.01
COL13A1-214ENST00000522165 TNFAIP2Q03169 654 aa27.63■■■□□ 2.01
COL13A1-214ENST00000522165 CLUL1Q15846 466 aa27.63■■■□□ 2.01
COL13A1-214ENST00000522165 MON1BQ7L1V2 547 aa27.63■■■□□ 2.01
COL13A1-214ENST00000522165 XYLT2Q9H1B5 865 aa27.63■■■□□ 2.01
COL13A1-214ENST00000522165 THAP12O43422 761 aa27.63■■■□□ 2.01
COL13A1-214ENST00000522165 STAG3L1P0CL83 205 aa27.63■■■□□ 2.01
COL13A1-214ENST00000522165 SND1Q7KZF4 910 aaKnown RBP eCLIP27.63■■■□□ 2.01
COL13A1-214ENST00000522165 RASAL3Q86YV0 1011 aa27.63■■■□□ 2.01
COL13A1-214ENST00000522165 CASKIN2Q8WXE0 1202 aa27.63■■■□□ 2.01
COL13A1-214ENST00000522165 SLITRK6Q9H5Y7 841 aa27.63■■■□□ 2.01
COL13A1-214ENST00000522165 ESYT3A0FGR9 886 aa27.62■■■□□ 2.01
COL13A1-214ENST00000522165 RRM1P23921 792 aa27.62■■■□□ 2.01
COL13A1-214ENST00000522165 MAP2K5Q13163 448 aa27.62■■■□□ 2.01
COL13A1-214ENST00000522165 ZNF699Q32M78 642 aa27.62■■■□□ 2.01
COL13A1-214ENST00000522165 CPNE8Q86YQ8 564 aa27.62■■■□□ 2.01
COL13A1-214ENST00000522165 NLRP7Q8WX94 980 aa27.62■■■□□ 2.01
COL13A1-214ENST00000522165 CPB2Q96IY4 423 aa27.62■■■□□ 2.01
COL13A1-214ENST00000522165 MGAMO43451 1857 aa27.62■■■□□ 2.01
COL13A1-214ENST00000522165 SPOPO43791 374 aa27.61■■■□□ 2.01
COL13A1-214ENST00000522165 ARF4P18085 180 aaPredicted RBP27.61■■■□□ 2.01
COL13A1-214ENST00000522165 CTNNA2P26232 953 aa27.61■■■□□ 2.01
COL13A1-214ENST00000522165 CTNNA1P35221 906 aaKnown RBP27.61■■■□□ 2.01
COL13A1-214ENST00000522165 PAK2Q13177 524 aa27.61■■■□□ 2.01
COL13A1-214ENST00000522165 PASD1Q8IV76 773 aa27.61■■■□□ 2.01
COL13A1-214ENST00000522165 KIAA0319LQ8IZA0 1049 aa27.61■■■□□ 2.01
COL13A1-214ENST00000522165 CAVIN3Q969G5 261 aa27.61■■■□□ 2.01
COL13A1-214ENST00000522165 CISHQ9NSE2 258 aa27.61■■■□□ 2.01
COL13A1-214ENST00000522165 NR2E1Q9Y466 385 aa27.61■■■□□ 2.01
COL13A1-214ENST00000522165 POU5F1Q01860 360 aaKnown RBP27.61■■■□□ 2.01
COL13A1-214ENST00000522165 ZNF606Q8WXB4 792 aa27.61■■■□□ 2.01
COL13A1-214ENST00000522165 ZCCHC17Q9NP64 241 aaKnown RBP27.61■■■□□ 2.01
COL13A1-214ENST00000522165 NMRK2Q9NPI5 230 aa27.61■■■□□ 2.01
COL13A1-214ENST00000522165 ANAPC7Q9UJX3 599 aa27.61■■■□□ 2.01
COL13A1-214ENST00000522165 PCDHA3Q9Y5H8 950 aa27.61■■■□□ 2.01
COL13A1-214ENST00000522165 CCDC66A2RUB6 948 aa27.6■■■□□ 2.01
COL13A1-214ENST00000522165 LACTBL1A8MY62 500 aa27.6■■■□□ 2.01
COL13A1-214ENST00000522165 BHMG1C9JSJ3 638 aaPredicted RBP27.6■■■□□ 2.01
COL13A1-214ENST00000522165 POLR3GO15318 223 aaPredicted RBP27.6■■■□□ 2.01
COL13A1-214ENST00000522165 MEFVO15553 781 aaPredicted RBP27.6■■■□□ 2.01
COL13A1-214ENST00000522165 CD58P19256 250 aa27.6■■■□□ 2.01
COL13A1-214ENST00000522165 AARSP49588 968 aaKnown RBP eCLIP27.6■■■□□ 2.01
COL13A1-214ENST00000522165 ZNF157P51786 506 aaPredicted RBP27.6■■■□□ 2.01
COL13A1-214ENST00000522165 PRAMEF19Q5SWL8 479 aa27.6■■■□□ 2.01
COL13A1-214ENST00000522165 PHF13Q86YI8 300 aaPredicted RBP27.6■■■□□ 2.01
COL13A1-214ENST00000522165 IFT81Q8WYA0 676 aa27.6■■■□□ 2.01
COL13A1-214ENST00000522165 NFU1Q9UMS0 254 aa27.6■■■□□ 2.01
COL13A1-214ENST00000522165 MROH7Q68CQ1 1323 aa27.6■■■□□ 2.01
COL13A1-214ENST00000522165 DYNC1LI2O43237 492 aaPredicted RBP27.6■■■□□ 2.01
COL13A1-214ENST00000522165 ECM2O94769 699 aaPredicted RBP27.6■■■□□ 2.01
COL13A1-214ENST00000522165 NFICP08651 508 aa27.6■■■□□ 2.01
COL13A1-214ENST00000522165 ASPAP45381 313 aa27.6■■■□□ 2.01
COL13A1-214ENST00000522165 IRF5Q13568 498 aa27.6■■■□□ 2.01
COL13A1-214ENST00000522165 SMYD5Q6GMV2 418 aa27.6■■■□□ 2.01
COL13A1-214ENST00000522165 PPP1R2P3Q6NXS1 205 aa27.6■■■□□ 2.01
COL13A1-214ENST00000522165 VCPIP1Q96JH7 1222 aa27.6■■■□□ 2.01
COL13A1-214ENST00000522165 PRDM10Q9NQV6 1147 aa27.6■■■□□ 2.01
COL13A1-214ENST00000522165 GNEQ9Y223 722 aaKnown RBP27.6■■■□□ 2.01
COL13A1-214ENST00000522165 MANSC4A6NHS7 340 aaPredicted RBP27.59■■■□□ 2.01
COL13A1-214ENST00000522165 A6NJR5 290 aa27.59■■■□□ 2.01
COL13A1-214ENST00000522165 SSTR3P32745 418 aaPredicted RBP27.59■■■□□ 2.01
COL13A1-214ENST00000522165 NNTQ13423 1086 aa27.59■■■□□ 2.01
COL13A1-214ENST00000522165 TAF1CQ15572 869 aaPredicted RBP27.59■■■□□ 2.01
COL13A1-214ENST00000522165 GLIPR1L2Q4G1C9 344 aa27.59■■■□□ 2.01
COL13A1-214ENST00000522165 C2CD6Q53TS8 623 aa27.59■■■□□ 2.01
COL13A1-214ENST00000522165 LIN9Q5TKA1 542 aa27.59■■■□□ 2.01
COL13A1-214ENST00000522165 AADACL2Q6P093 401 aa27.59■■■□□ 2.01
COL13A1-214ENST00000522165 ZNF410Q86VK4 478 aa27.59■■■□□ 2.01
COL13A1-214ENST00000522165 CCDC26Q8TAB7 109 aa27.59■■■□□ 2.01
COL13A1-214ENST00000522165 SCLT1Q96NL6 688 aa27.59■■■□□ 2.01
COL13A1-214ENST00000522165 SETD4Q9NVD3 440 aa27.59■■■□□ 2.01
COL13A1-214ENST00000522165 FLRT1Q9NZU1 646 aa27.59■■■□□ 2.01
COL13A1-214ENST00000522165 ADAM22Q9P0K1 906 aa27.59■■■□□ 2.01
COL13A1-214ENST00000522165 AMACRQ9UHK6 382 aa27.59■■■□□ 2.01
COL13A1-214ENST00000522165 SIX4Q9UIU6 781 aa27.59■■■□□ 2.01
COL13A1-214ENST00000522165 DOCK3Q8IZD9 2030 aa27.59■■■□□ 2.01
COL13A1-214ENST00000522165 KAT6AQ92794 2004 aa27.59■■■□□ 2.01
COL13A1-214ENST00000522165 RRN3P2A6NIE6 340 aa27.58■■■□□ 2.01
COL13A1-214ENST00000522165 TSPAN1O60635 241 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms