RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 UBLCP1Q8WVY7 318 aaPredicted RBP19.57■□□□□ 0.72
SDC2-202ENST00000518385 RFFLQ8WZ73 363 aa19.57■□□□□ 0.72
SDC2-202ENST00000518385 SPATA33Q96N06 139 aa19.57■□□□□ 0.72
SDC2-202ENST00000518385 APBA2Q99767 749 aa19.57■□□□□ 0.72
SDC2-202ENST00000518385 HINFPQ9BQA5 517 aa19.57■□□□□ 0.72
SDC2-202ENST00000518385 KIFC3Q9BVG8 833 aa19.57■□□□□ 0.72
SDC2-202ENST00000518385 NSRP1Q9H0G5 558 aaKnown RBP19.57■□□□□ 0.72
SDC2-202ENST00000518385 PPANQ9NQ55 473 aaKnown RBP19.57■□□□□ 0.72
SDC2-202ENST00000518385 MGAMO43451 1857 aa19.57■□□□□ 0.72
SDC2-202ENST00000518385 ADGRA3Q8IWK6 1321 aa19.57■□□□□ 0.72
SDC2-202ENST00000518385 CFAP73A6NFT4 308 aa19.57■□□□□ 0.72
SDC2-202ENST00000518385 K7ERI5 159 aa19.57■□□□□ 0.72
SDC2-202ENST00000518385 NOP56O00567 594 aaKnown RBP19.57■□□□□ 0.72
SDC2-202ENST00000518385 EXTL3O43909 919 aa19.57■□□□□ 0.72
SDC2-202ENST00000518385 EVI5O60447 810 aa19.57■□□□□ 0.72
SDC2-202ENST00000518385 GH1P01241 217 aa19.57■□□□□ 0.72
SDC2-202ENST00000518385 GLRA2P23416 452 aa19.57■□□□□ 0.72
SDC2-202ENST00000518385 HPDP32754 393 aaPredicted RBP19.57■□□□□ 0.72
SDC2-202ENST00000518385 ADCYAP1R1P41586 468 aa19.57■□□□□ 0.72
SDC2-202ENST00000518385 LIG4P49917 911 aa19.57■□□□□ 0.72
SDC2-202ENST00000518385 EFNA5P52803 228 aa19.57■□□□□ 0.72
SDC2-202ENST00000518385 SEC24CP53992 1094 aa19.57■□□□□ 0.72
SDC2-202ENST00000518385 DLG4P78352 724 aa19.57■□□□□ 0.72
SDC2-202ENST00000518385 POU5F1Q01860 360 aaKnown RBP19.57■□□□□ 0.72
SDC2-202ENST00000518385 ARHGAP1Q07960 439 aa19.57■□□□□ 0.72
SDC2-202ENST00000518385 CYP24A1Q07973 514 aa19.57■□□□□ 0.72
SDC2-202ENST00000518385 KIF22Q14807 665 aa19.57■□□□□ 0.72
SDC2-202ENST00000518385 ERMARDQ5T6L9 678 aa19.57■□□□□ 0.72
SDC2-202ENST00000518385 SLC39A4Q6P5W5 647 aa19.57■□□□□ 0.72
SDC2-202ENST00000518385 PARP9Q8IXQ6 854 aa19.57■□□□□ 0.72
SDC2-202ENST00000518385 CCHCR1Q8TD31 782 aa19.57■□□□□ 0.72
SDC2-202ENST00000518385 ATP8B4Q8TF62 1192 aa19.57■□□□□ 0.72
SDC2-202ENST00000518385 EMID1Q96A84 441 aaPredicted RBP19.57■□□□□ 0.72
SDC2-202ENST00000518385 CHMP6Q96FZ7 201 aa19.57■□□□□ 0.72
SDC2-202ENST00000518385 BICD1Q96G01 975 aa19.57■□□□□ 0.72
SDC2-202ENST00000518385 FMO2Q99518 471 aa19.57■□□□□ 0.72
SDC2-202ENST00000518385 PACSIN1Q9BY11 444 aa19.57■□□□□ 0.72
SDC2-202ENST00000518385 TMEM117Q9H0C3 514 aa19.57■□□□□ 0.72
SDC2-202ENST00000518385 MIF4GDA9UHW6 222 aaKnown RBP19.56■□□□□ 0.72
SDC2-202ENST00000518385 ADRB2P07550 413 aa19.56■□□□□ 0.72
SDC2-202ENST00000518385 EZRP15311 586 aaKnown RBP19.56■□□□□ 0.72
SDC2-202ENST00000518385 GCLMP48507 274 aa19.56■□□□□ 0.72
SDC2-202ENST00000518385 SOX10P56693 466 aa19.56■□□□□ 0.72
SDC2-202ENST00000518385 SLMAPQ14BN4 828 aa19.56■□□□□ 0.72
SDC2-202ENST00000518385 KRT71Q3SY84 523 aa19.56■□□□□ 0.72
SDC2-202ENST00000518385 PHLDB3Q6NSJ2 640 aa19.56■□□□□ 0.72
SDC2-202ENST00000518385 TAS1R3Q7RTX0 852 aa19.56■□□□□ 0.72
SDC2-202ENST00000518385 CPLX4Q7Z7G2 160 aa19.56■□□□□ 0.72
SDC2-202ENST00000518385 CBWD2Q8IUF1 395 aa19.56■□□□□ 0.72
SDC2-202ENST00000518385 CCDC197Q8NCU1 140 aa19.56■□□□□ 0.72
SDC2-202ENST00000518385 RAPGEF5Q92565 580 aa19.56■□□□□ 0.72
SDC2-202ENST00000518385 ARHGAP39Q9C0H5 1083 aa19.56■□□□□ 0.72
SDC2-202ENST00000518385 SMARCAD1Q9H4L7 1026 aa19.56■□□□□ 0.72
SDC2-202ENST00000518385 RNF186Q9NXI6 227 aa19.56■□□□□ 0.72
SDC2-202ENST00000518385 AJAP1Q9UKB5 411 aaPredicted RBP19.56■□□□□ 0.72
SDC2-202ENST00000518385 ZC3H11AO75152 810 aaKnown RBP eCLIP19.55■□□□□ 0.728e-7■■□□□ 13.7
SDC2-202ENST00000518385 GPC3P51654 580 aa19.55■□□□□ 0.72
SDC2-202ENST00000518385 CLDN10P78369 228 aa19.55■□□□□ 0.72
SDC2-202ENST00000518385 SP3Q02447 781 aa19.55■□□□□ 0.72
SDC2-202ENST00000518385 ADCY2Q08462 1091 aa19.55■□□□□ 0.72
SDC2-202ENST00000518385 RIPK1Q13546 671 aa19.55■□□□□ 0.72
SDC2-202ENST00000518385 MXD4Q14582 209 aaPredicted RBP19.55■□□□□ 0.72
SDC2-202ENST00000518385 CCL14Q16627 93 aa19.55■□□□□ 0.72
SDC2-202ENST00000518385 DUSP28Q4G0W2 176 aa19.55■□□□□ 0.72
SDC2-202ENST00000518385 C6orf118Q5T5N4 469 aa19.55■□□□□ 0.72
SDC2-202ENST00000518385 SMYD5Q6GMV2 418 aa19.55■□□□□ 0.72
SDC2-202ENST00000518385 GJB7Q6PEY0 223 aa19.55■□□□□ 0.72
SDC2-202ENST00000518385 FUKQ8N0W3 1084 aa19.55■□□□□ 0.72
SDC2-202ENST00000518385 SLC30A5Q8TAD4 765 aa19.55■□□□□ 0.72
SDC2-202ENST00000518385 PLEKHO2Q8TD55 490 aa19.55■□□□□ 0.72
SDC2-202ENST00000518385 ASAP3Q8TDY4 903 aa19.55■□□□□ 0.72
SDC2-202ENST00000518385 GLG1Q92896 1179 aa19.55■□□□□ 0.72
SDC2-202ENST00000518385 TMEM143Q96AN5 459 aa19.55■□□□□ 0.72
SDC2-202ENST00000518385 XPO6Q96QU8 1125 aaKnown RBP19.55■□□□□ 0.72
SDC2-202ENST00000518385 PLCD4Q9BRC7 762 aa19.55■□□□□ 0.72
SDC2-202ENST00000518385 GPR88Q9GZN0 384 aa19.55■□□□□ 0.72
SDC2-202ENST00000518385 RABEP2Q9H5N1 569 aa19.55■□□□□ 0.72
SDC2-202ENST00000518385 MCM8Q9UJA3 840 aa19.55■□□□□ 0.72
SDC2-202ENST00000518385 NOVA2Q9UNW9 492 aaKnown RBP19.55■□□□□ 0.72
SDC2-202ENST00000518385 SIP14410 1827 aa19.55■□□□□ 0.72
SDC2-202ENST00000518385 IGKV6-21A0A0C4DH24 114 aa19.54■□□□□ 0.72
SDC2-202ENST00000518385 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.54■□□□□ 0.72
SDC2-202ENST00000518385 GOLGA8IPA6NC78 632 aa19.54■□□□□ 0.72
SDC2-202ENST00000518385 GOLGA8JA6NMD2 632 aa19.54■□□□□ 0.72
SDC2-202ENST00000518385 PODXLO00592 558 aa19.54■□□□□ 0.72
SDC2-202ENST00000518385 ADCY3O60266 1144 aa19.54■□□□□ 0.72
SDC2-202ENST00000518385 TRPA1O75762 1119 aa19.54■□□□□ 0.72
SDC2-202ENST00000518385 AGTP01019 485 aa19.54■□□□□ 0.72
SDC2-202ENST00000518385 SMPD1P17405 629 aa19.54■□□□□ 0.72
SDC2-202ENST00000518385 DRD4P21917 467 aa19.54■□□□□ 0.72
SDC2-202ENST00000518385 MFAP3P55082 362 aa19.54■□□□□ 0.72
SDC2-202ENST00000518385 DHX9Q08211 1270 aaKnown RBP19.54■□□□□ 0.72
SDC2-202ENST00000518385 PRAMEF19Q5SWL8 479 aa19.54■□□□□ 0.72
SDC2-202ENST00000518385 CYB5D1Q6P9G0 228 aa19.54■□□□□ 0.72
SDC2-202ENST00000518385 CRELD2Q6UXH1 353 aaPredicted RBP19.54■□□□□ 0.72
SDC2-202ENST00000518385 ZPBP2Q6X784 338 aa19.54■□□□□ 0.72
SDC2-202ENST00000518385 ENOSF1Q7L5Y1 443 aa19.54■□□□□ 0.72
SDC2-202ENST00000518385 SYT11Q9BT88 431 aa19.54■□□□□ 0.72
SDC2-202ENST00000518385 UBE2TQ9NPD8 197 aaPredicted RBP19.54■□□□□ 0.72
SDC2-202ENST00000518385 HBP1O60381 514 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms