RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-216ENST00000509784 SLC6A4P31645 630 aa3.85□□□□□ -1.79
CALCOCO2-216ENST00000509784 SUMO3P55854 103 aaPredicted RBP3.85□□□□□ -1.79
CALCOCO2-216ENST00000509784 FMO1Q01740 532 aa3.85□□□□□ -1.79
CALCOCO2-216ENST00000509784 GRM7Q14831 915 aa3.85□□□□□ -1.79
CALCOCO2-216ENST00000509784 VPS72Q15906 364 aa3.85□□□□□ -1.79
CALCOCO2-216ENST00000509784 C1orf228Q6PIY5 440 aa3.85□□□□□ -1.79
CALCOCO2-216ENST00000509784 TOGARAM2Q6ZUX3 1019 aa3.85□□□□□ -1.79
CALCOCO2-216ENST00000509784 RNF169Q8NCN4 708 aa3.85□□□□□ -1.79
CALCOCO2-216ENST00000509784 GIMAP8Q8ND71 665 aaPredicted RBP3.85□□□□□ -1.79
CALCOCO2-216ENST00000509784 FEZF2Q8TBJ5 459 aa3.85□□□□□ -1.79
CALCOCO2-216ENST00000509784 TFAP2CQ92754 450 aa3.85□□□□□ -1.79
CALCOCO2-216ENST00000509784 RIPOR3Q96MK2 946 aa3.85□□□□□ -1.79
CALCOCO2-216ENST00000509784 FMNL2Q96PY5 1086 aa3.85□□□□□ -1.79
CALCOCO2-216ENST00000509784 CPPED1Q9BRF8 314 aaPredicted RBP3.85□□□□□ -1.79
CALCOCO2-216ENST00000509784 NELFAQ9H3P2 528 aa3.85□□□□□ -1.79
CALCOCO2-216ENST00000509784 GSTO2Q9H4Y5 243 aa3.85□□□□□ -1.79
CALCOCO2-216ENST00000509784 SEC61A2Q9H9S3 476 aa3.85□□□□□ -1.79
CALCOCO2-216ENST00000509784 SPON1Q9HCB6 807 aa3.85□□□□□ -1.79
CALCOCO2-216ENST00000509784 PLCB1Q9NQ66 1216 aa3.85□□□□□ -1.79
CALCOCO2-216ENST00000509784 SACM1LQ9NTJ5 587 aa3.85□□□□□ -1.79
CALCOCO2-216ENST00000509784 FBXO34Q9NWN3 711 aa3.85□□□□□ -1.79
CALCOCO2-216ENST00000509784 DUSP10Q9Y6W6 482 aa3.85□□□□□ -1.79
CALCOCO2-216ENST00000509784 ZNF536O15090 1300 aa3.85□□□□□ -1.79
CALCOCO2-216ENST00000509784 CUX1P39880 1505 aa3.85□□□□□ -1.79
CALCOCO2-216ENST00000509784 PRSS29PA6NIE9 313 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 PRR5-ARHGAP8B1AHC4 643 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 ISM1B1AKI9 464 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 RASA4BC9J798 803 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 RASA4O43374 803 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 LAMTOR5O43504 91 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 TRIM13O60858 407 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 SLC43A1O75387 559 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 EIF3JO75822 258 aaKnown RBP3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 POMCP01189 267 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 AMHP03971 560 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 GJB1P08034 283 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 ALAS1P13196 640 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 BMP7P18075 431 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 GNAT2P19087 354 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 CNR2P34972 360 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 RPS19P39019 145 aaKnown RBP3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 TM4SF4P48230 202 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 EPHB4P54760 987 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 PSMC1P62191 440 aaKnown RBP3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 ZNF543Q08ER8 600 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 SURF1Q15526 300 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 BMT2Q1RMZ1 405 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 LONRF3Q496Y0 759 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 C3orf38Q5JPI3 329 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 ATXN7L2Q5T6C5 722 aaPredicted RBP3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 UTP14CQ5TAP6 766 aaKnown RBP3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 SLFN13Q68D06 897 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 FRMD5Q7Z6J6 570 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 FAM83AQ86UY5 434 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 SESTD1Q86VW0 696 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 LIX1LQ8IVB5 337 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 SMC5Q8IY18 1101 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 ELOA2Q8IYF1 753 aaPredicted RBP3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 CCDC33Q8N5R6 958 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 NLGN4YQ8NFZ3 816 aaPredicted RBP3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 ZFP28Q8NHY6 868 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 BORCS6Q96GS4 357 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 PHACTR3Q96KR7 559 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 SGCZQ96LD1 299 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 LSM14BQ9BX40 385 aaKnown RBP3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 BTBD1Q9H0C5 482 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 MEGF9Q9H1U4 602 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 PNPLA8Q9NP80 782 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 STK32BQ9NY57 414 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 PLA2G3Q9NZ20 509 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 JKAMPQ9P055 326 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 POGKQ9P215 609 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 CFAP97Q9P2B7 532 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 SRRDQ9UH36 339 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 ZDHHC8Q9ULC8 765 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 SLC45A2Q9UMX9 530 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 RAB3GAP2Q9H2M9 1393 aa3.84□□□□□ -1.79
CALCOCO2-216ENST00000509784 HMGXB3Q12766 1538 aa3.84□□□□□ -1.8
CALCOCO2-216ENST00000509784 PCF11O94913 1555 aaKnown RBP3.84□□□□□ -1.8
CALCOCO2-216ENST00000509784 CDHR4A6H8M9 788 aa3.83□□□□□ -1.8
CALCOCO2-216ENST00000509784 NPEPPSL1A6NEC2 478 aa3.83□□□□□ -1.8
CALCOCO2-216ENST00000509784 POM121BA6NF01 834 aa3.83□□□□□ -1.8
CALCOCO2-216ENST00000509784 ZNF785A8K8V0 405 aa3.83□□□□□ -1.8
CALCOCO2-216ENST00000509784 BTN3A1O00481 513 aa3.83□□□□□ -1.8
CALCOCO2-216ENST00000509784 NCK2O43639 380 aa3.83□□□□□ -1.8
CALCOCO2-216ENST00000509784 HAUS5O94927 633 aa3.83□□□□□ -1.8
CALCOCO2-216ENST00000509784 GNAI2P04899 355 aa3.83□□□□□ -1.8
CALCOCO2-216ENST00000509784 ITGB1P05556 798 aa3.83□□□□□ -1.8
CALCOCO2-216ENST00000509784 SETSIPP0DME0 302 aa3.83□□□□□ -1.8
CALCOCO2-216ENST00000509784 RPL17P18621 184 aaKnown RBP3.83□□□□□ -1.8
CALCOCO2-216ENST00000509784 EN2P19622 333 aaPredicted RBP3.83□□□□□ -1.8
CALCOCO2-216ENST00000509784 TNFSF4P23510 183 aa3.83□□□□□ -1.8
CALCOCO2-216ENST00000509784 SLC6A2P23975 617 aa3.83□□□□□ -1.8
CALCOCO2-216ENST00000509784 MSX2P35548 267 aaPredicted RBP3.83□□□□□ -1.8
CALCOCO2-216ENST00000509784 STT3AP46977 705 aa3.83□□□□□ -1.8
CALCOCO2-216ENST00000509784 CASP5P51878 434 aa3.83□□□□□ -1.8
CALCOCO2-216ENST00000509784 DUSP8Q13202 625 aa3.83□□□□□ -1.8
CALCOCO2-216ENST00000509784 KIF22Q14807 665 aa3.83□□□□□ -1.8
CALCOCO2-216ENST00000509784 UBXN2BQ14CS0 331 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms