RNA–Protein interactions for RNA: ENST00000497318.1

SUPT20H-223, Transcript of SPT20 homolog, SAGA complex component, human

TSL 3

Gene SUPT20H, Length 734 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-223	ENST00000497318	LIMK1	P53667	647 aa		18.19	■□□□□ 0.5
SUPT20H-223	ENST00000497318	CTXN3	Q4LDR2	81 aa		18.19	■□□□□ 0.5
SUPT20H-223	ENST00000497318	EARS2	Q5JPH6	523 aa	Known RBP	18.19	■□□□□ 0.5
SUPT20H-223	ENST00000497318	EEF1DP3	Q658K8	133 aa		18.19	■□□□□ 0.5
SUPT20H-223	ENST00000497318	HEATR6	Q6AI08	1181 aa	Known RBP	18.19	■□□□□ 0.5
SUPT20H-223	ENST00000497318	PADI6	Q6TGC4	694 aa		18.19	■□□□□ 0.5
SUPT20H-223	ENST00000497318	ERMN	Q8TAM6	284 aa		18.19	■□□□□ 0.5
SUPT20H-223	ENST00000497318	AFF4	Q9UHB7	1163 aa	Known RBP	18.19	■□□□□ 0.5
SUPT20H-223	ENST00000497318	FBXL5	Q9UKA1	691 aa		18.19	■□□□□ 0.5
SUPT20H-223	ENST00000497318	ZFHX4	Q86UP3	3567 aa		18.19	■□□□□ 0.5
SUPT20H-223	ENST00000497318	ATRX	P46100	2492 aa		18.18	■□□□□ 0.5
SUPT20H-223	ENST00000497318	NOTCH4	Q99466	2003 aa		18.18	■□□□□ 0.5
SUPT20H-223	ENST00000497318	ARHGEF35	A5YM69	484 aa		18.18	■□□□□ 0.5
SUPT20H-223	ENST00000497318	HEPACAM2	A8MVW5	462 aa		18.18	■□□□□ 0.5
SUPT20H-223	ENST00000497318	PODXL	O00592	558 aa		18.18	■□□□□ 0.5
SUPT20H-223	ENST00000497318	CHAD	O15335	359 aa		18.18	■□□□□ 0.5
SUPT20H-223	ENST00000497318	EPB41L2	O43491	1005 aa	Known RBP	18.18	■□□□□ 0.5
SUPT20H-223	ENST00000497318	IGFBP6	P24592	240 aa	Predicted RBP	18.18	■□□□□ 0.5
SUPT20H-223	ENST00000497318	RPL9	P32969	192 aa	Known RBP	18.18	■□□□□ 0.5
SUPT20H-223	ENST00000497318	CCR2	P41597	374 aa		18.18	■□□□□ 0.5
SUPT20H-223	ENST00000497318	SHC2	P98077	582 aa		18.18	■□□□□ 0.5
SUPT20H-223	ENST00000497318	NR5A1	Q13285	461 aa		18.18	■□□□□ 0.5
SUPT20H-223	ENST00000497318	GAS6	Q14393	721 aa		18.18	■□□□□ 0.5
SUPT20H-223	ENST00000497318	CATSPER3	Q86XQ3	398 aa		18.18	■□□□□ 0.5
SUPT20H-223	ENST00000497318	FAM160A2	Q8N612	972 aa	Predicted RBP	18.18	■□□□□ 0.5
SUPT20H-223	ENST00000497318	APPL2	Q8NEU8	664 aa		18.18	■□□□□ 0.5
SUPT20H-223	ENST00000497318	LOXL4	Q96JB6	756 aa		18.18	■□□□□ 0.5
SUPT20H-223	ENST00000497318	GOLGA2P5	Q9HBQ8	144 aa		18.18	■□□□□ 0.5
SUPT20H-223	ENST00000497318	GJB4	Q9NTQ9	266 aa		18.18	■□□□□ 0.5
SUPT20H-223	ENST00000497318	ORC3	Q9UBD5	711 aa	Predicted RBP	18.18	■□□□□ 0.5
SUPT20H-223	ENST00000497318	USP20	Q9Y2K6	914 aa		18.18	■□□□□ 0.5
SUPT20H-223	ENST00000497318	FAM205C	A6NFA0	338 aa		18.17	■□□□□ 0.5
SUPT20H-223	ENST00000497318		K7ERI5	159 aa		18.17	■□□□□ 0.5
SUPT20H-223	ENST00000497318	SPATA31C1	P0DKV0	1188 aa		18.17	■□□□□ 0.5
SUPT20H-223	ENST00000497318	PML	P29590	882 aa		18.17	■□□□□ 0.5
SUPT20H-223	ENST00000497318	EPHA5	P54756	1037 aa		18.17	■□□□□ 0.5
SUPT20H-223	ENST00000497318	SCRN1	Q12765	414 aa		18.17	■□□□□ 0.5
SUPT20H-223	ENST00000497318	TWF1	Q12792	350 aa		18.17	■□□□□ 0.5
SUPT20H-223	ENST00000497318	SRSF5	Q13243	272 aa	Known RBP	18.17	■□□□□ 0.5
SUPT20H-223	ENST00000497318	MRPL58	Q14197	206 aa	Known RBP	18.17	■□□□□ 0.5
SUPT20H-223	ENST00000497318	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	18.17	■□□□□ 0.5
SUPT20H-223	ENST00000497318	ZNF280D	Q6N043	979 aa		18.17	■□□□□ 0.5
SUPT20H-223	ENST00000497318	HAUS6	Q7Z4H7	955 aa		18.17	■□□□□ 0.5
SUPT20H-223	ENST00000497318	RALGPS2	Q86X27	583 aa	Predicted RBP	18.17	■□□□□ 0.5
SUPT20H-223	ENST00000497318	HS6ST3	Q8IZP7	471 aa		18.17	■□□□□ 0.5
SUPT20H-223	ENST00000497318	SYNPO	Q8N3V7	929 aa		18.17	■□□□□ 0.5
SUPT20H-223	ENST00000497318	C3orf58	Q8NDZ4	430 aa		18.17	■□□□□ 0.5
SUPT20H-223	ENST00000497318	BSND	Q8WZ55	320 aa		18.17	■□□□□ 0.5
SUPT20H-223	ENST00000497318	MTMR9	Q96QG7	549 aa		18.17	■□□□□ 0.5
SUPT20H-223	ENST00000497318	POLR3C	Q9BUI4	534 aa	Predicted RBP	18.17	■□□□□ 0.5
SUPT20H-223	ENST00000497318	TNFSF13B	Q9Y275	285 aa		18.17	■□□□□ 0.5
SUPT20H-223	ENST00000497318	FAM208B	Q5VWN6	2430 aa		18.16	■□□□□ 0.5
SUPT20H-223	ENST00000497318		K7ESF4	209 aa		18.16	■□□□□ 0.5
SUPT20H-223	ENST00000497318	MARCKS	P29966	332 aa	Predicted RBP	18.16	■□□□□ 0.5
SUPT20H-223	ENST00000497318	GRM5	P41594	1212 aa		18.16	■□□□□ 0.5
SUPT20H-223	ENST00000497318	PLD1	Q13393	1074 aa		18.16	■□□□□ 0.5
SUPT20H-223	ENST00000497318	NT5DC1	Q5TFE4	455 aa		18.16	■□□□□ 0.5
SUPT20H-223	ENST00000497318	WDR5B	Q86VZ2	330 aa		18.16	■□□□□ 0.5
SUPT20H-223	ENST00000497318	KIFAP3	Q92845	792 aa		18.16	■□□□□ 0.5
SUPT20H-223	ENST00000497318	CEP72	Q9P209	647 aa		18.16	■□□□□ 0.5
SUPT20H-223	ENST00000497318	ARID2	Q68CP9	1835 aa		18.16	■□□□□ 0.5
SUPT20H-223	ENST00000497318	SLC38A8	A6NNN8	435 aa		18.15	■□□□□ 0.5
SUPT20H-223	ENST00000497318	ARNTL	O00327	626 aa		18.15	■□□□□ 0.5
SUPT20H-223	ENST00000497318	DPYSL4	O14531	572 aa		18.15	■□□□□ 0.5
SUPT20H-223	ENST00000497318	AXIN1	O15169	862 aa		18.15	■□□□□ 0.5
SUPT20H-223	ENST00000497318	SOX4	Q06945	474 aa	Predicted RBP	18.15	■□□□□ 0.5
SUPT20H-223	ENST00000497318	TEAD2	Q15562	447 aa		18.15	■□□□□ 0.5
SUPT20H-223	ENST00000497318	XKR4	Q5GH76	650 aa		18.15	■□□□□ 0.5
SUPT20H-223	ENST00000497318	ALKAL1	Q6UXT8	129 aa		18.15	■□□□□ 0.5
SUPT20H-223	ENST00000497318	CACNA2D4	Q7Z3S7	1137 aa		18.15	■□□□□ 0.5
SUPT20H-223	ENST00000497318	TNFRSF25	Q93038	417 aa		18.15	■□□□□ 0.5
SUPT20H-223	ENST00000497318	OXCT2	Q9BYC2	517 aa	Predicted RBP	18.15	■□□□□ 0.5
SUPT20H-223	ENST00000497318	RBM12	Q9NTZ6	932 aa	Known RBP	18.15	■□□□□ 0.5
SUPT20H-223	ENST00000497318	VWA8	A3KMH1	1905 aa		18.14	■□□□□ 0.49
SUPT20H-223	ENST00000497318	SPECC1L-ADORA2A	F8WAN1	911 aa		18.14	■□□□□ 0.49
SUPT20H-223	ENST00000497318	NRG2	O14511	850 aa	Predicted RBP	18.14	■□□□□ 0.49
SUPT20H-223	ENST00000497318	PFKFB2	O60825	505 aa		18.14	■□□□□ 0.49
SUPT20H-223	ENST00000497318	MOSPD3	O75425	235 aa		18.14	■□□□□ 0.49
SUPT20H-223	ENST00000497318	ZNF806	P0C7X5	589 aa		18.14	■□□□□ 0.49
SUPT20H-223	ENST00000497318	CPB1	P15086	417 aa		18.14	■□□□□ 0.49
SUPT20H-223	ENST00000497318	KCNE1	P15382	129 aa		18.14	■□□□□ 0.49
SUPT20H-223	ENST00000497318	GJA1	P17302	382 aa		18.14	■□□□□ 0.49
SUPT20H-223	ENST00000497318	EPHB3	P54753	998 aa		18.14	■□□□□ 0.49
SUPT20H-223	ENST00000497318	FCHO2	Q0JRZ9	810 aa		18.14	■□□□□ 0.49
SUPT20H-223	ENST00000497318	ARHGAP29	Q52LW3	1261 aa		18.14	■□□□□ 0.49
SUPT20H-223	ENST00000497318	SHKBP1	Q8TBC3	707 aa		18.14	■□□□□ 0.49
SUPT20H-223	ENST00000497318	SUSD3	Q96L08	255 aa		18.14	■□□□□ 0.49
SUPT20H-223	ENST00000497318	ACAP3	Q96P50	834 aa		18.14	■□□□□ 0.49
SUPT20H-223	ENST00000497318	KIFC3	Q9BVG8	833 aa		18.14	■□□□□ 0.49
SUPT20H-223	ENST00000497318	ARRDC1-AS1	Q9H2J1	176 aa		18.14	■□□□□ 0.49
SUPT20H-223	ENST00000497318	PHLPP2	Q6ZVD8	1323 aa		18.14	■□□□□ 0.49
SUPT20H-223	ENST00000497318	MYBPHL	A2RUH7	354 aa		18.13	■□□□□ 0.49
SUPT20H-223	ENST00000497318	MED24	O75448	989 aa		18.13	■□□□□ 0.49
SUPT20H-223	ENST00000497318	FGF19	O95750	216 aa		18.13	■□□□□ 0.49
SUPT20H-223	ENST00000497318	EDN1	P05305	212 aa		18.13	■□□□□ 0.49
SUPT20H-223	ENST00000497318	RPA1	P27694	616 aa		18.13	■□□□□ 0.49
SUPT20H-223	ENST00000497318	CTH	P32929	405 aa		18.13	■□□□□ 0.49
SUPT20H-223	ENST00000497318	MCM4	P33991	863 aa		18.13	■□□□□ 0.49
SUPT20H-223	ENST00000497318	OSTN	P61366	133 aa		18.13	■□□□□ 0.49
SUPT20H-223	ENST00000497318	TRIM29	Q14134	588 aa		18.13	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms