RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 PHLPP2Q6ZVD8 1323 aa15.61■□□□□ 0.09
VARS-228ENST00000495010 NCOR2Q9Y618 2525 aa15.6■□□□□ 0.09
VARS-228ENST00000495010 SHISA7A6NL88 538 aa15.6■□□□□ 0.09
VARS-228ENST00000495010 JAK2O60674 1132 aa15.6■□□□□ 0.09
VARS-228ENST00000495010 RETP07949 1114 aa15.6■□□□□ 0.09
VARS-228ENST00000495010 CPB1P15086 417 aa15.6■□□□□ 0.09
VARS-228ENST00000495010 TGM1P22735 817 aa15.6■□□□□ 0.09
VARS-228ENST00000495010 CCNE1P24864 410 aa15.6■□□□□ 0.09
VARS-228ENST00000495010 CCR2P41597 374 aa15.6■□□□□ 0.09
VARS-228ENST00000495010 ANAPC15P60006 121 aa15.6■□□□□ 0.09
VARS-228ENST00000495010 ORC2Q13416 577 aaPredicted RBP15.6■□□□□ 0.09
VARS-228ENST00000495010 SIM2Q14190 667 aaPredicted RBP15.6■□□□□ 0.09
VARS-228ENST00000495010 LRRC32Q14392 662 aa15.6■□□□□ 0.09
VARS-228ENST00000495010 XKR4Q5GH76 650 aa15.6■□□□□ 0.09
VARS-228ENST00000495010 ALKAL1Q6UXT8 129 aa15.6■□□□□ 0.09
VARS-228ENST00000495010 MAP4K3Q8IVH8 894 aa15.6■□□□□ 0.09
VARS-228ENST00000495010 HS6ST3Q8IZP7 471 aa15.6■□□□□ 0.09
VARS-228ENST00000495010 ZSCAN18Q8TBC5 510 aaPredicted RBP15.6■□□□□ 0.09
VARS-228ENST00000495010 NETO1Q8TDF5 533 aa15.6■□□□□ 0.09
VARS-228ENST00000495010 E2F7Q96AV8 911 aa15.6■□□□□ 0.09
VARS-228ENST00000495010 ZSWIM3Q96MP5 696 aa15.6■□□□□ 0.09
VARS-228ENST00000495010 GPR88Q9GZN0 384 aa15.6■□□□□ 0.09
VARS-228ENST00000495010 CDT1Q9H211 546 aa15.6■□□□□ 0.09
VARS-228ENST00000495010 AFF4Q9UHB7 1163 aaKnown RBP15.6■□□□□ 0.09
VARS-228ENST00000495010 KIAA1024Q9UPX6 916 aa15.6■□□□□ 0.09
VARS-228ENST00000495010 DNAH14Q0VDD8 3507 aa15.59■□□□□ 0.09
VARS-228ENST00000495010 LRP3O75074 770 aa15.59■□□□□ 0.09
VARS-228ENST00000495010 LARGE1O95461 756 aa15.59■□□□□ 0.09
VARS-228ENST00000495010 MCF2P10911 925 aa15.59■□□□□ 0.09
VARS-228ENST00000495010 HARSP12081 509 aaKnown RBP15.59■□□□□ 0.09
VARS-228ENST00000495010 TDGF1P13385 188 aa15.59■□□□□ 0.09
VARS-228ENST00000495010 VIPR2P41587 438 aa15.59■□□□□ 0.09
VARS-228ENST00000495010 KPNA1P52294 538 aaPredicted RBP15.59■□□□□ 0.09
VARS-228ENST00000495010 PEX3P56589 373 aa15.59■□□□□ 0.09
VARS-228ENST00000495010 GUCY1B3Q02153 619 aa15.59■□□□□ 0.09
VARS-228ENST00000495010 DMP1Q13316 513 aaPredicted RBP15.59■□□□□ 0.09
VARS-228ENST00000495010 GNL2Q13823 731 aaKnown RBP15.59■□□□□ 0.09
VARS-228ENST00000495010 MRPL58Q14197 206 aaKnown RBP15.59■□□□□ 0.09
VARS-228ENST00000495010 C1orf228Q6PIY5 440 aa15.59■□□□□ 0.09
VARS-228ENST00000495010 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.59■□□□□ 0.09
VARS-228ENST00000495010 MFSD6LQ8IWD5 586 aa15.59■□□□□ 0.09
VARS-228ENST00000495010 ZNF687Q8N1G0 1237 aa15.59■□□□□ 0.09
VARS-228ENST00000495010 FAM200AQ8TCP9 573 aa15.59■□□□□ 0.09
VARS-228ENST00000495010 MSANTD3Q96H12 275 aa15.59■□□□□ 0.09
VARS-228ENST00000495010 CHAMP1Q96JM3 812 aa15.59■□□□□ 0.09
VARS-228ENST00000495010 TMEM134Q9H6X4 195 aa15.59■□□□□ 0.09
VARS-228ENST00000495010 KMT5AQ9NQR1 393 aa15.59■□□□□ 0.09
VARS-228ENST00000495010 LRWD1Q9UFC0 647 aa15.59■□□□□ 0.09
VARS-228ENST00000495010 STK24Q9Y6E0 443 aa15.59■□□□□ 0.09
VARS-228ENST00000495010 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.59■□□□□ 0.09
VARS-228ENST00000495010 TRIP11Q15643 1979 aa15.58■□□□□ 0.09
VARS-228ENST00000495010 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.58■□□□□ 0.08
VARS-228ENST00000495010 HEPACAM2A8MVW5 462 aa15.58■□□□□ 0.08
VARS-228ENST00000495010 ADRB1P08588 477 aa15.58■□□□□ 0.08
VARS-228ENST00000495010 KCNE1P15382 129 aa15.58■□□□□ 0.08
VARS-228ENST00000495010 GJA1P17302 382 aa15.58■□□□□ 0.08
VARS-228ENST00000495010 NPTX2P47972 431 aa15.58■□□□□ 0.08
VARS-228ENST00000495010 SATB1Q01826 763 aa15.58■□□□□ 0.08
VARS-228ENST00000495010 TEAD2Q15562 447 aa15.58■□□□□ 0.08
VARS-228ENST00000495010 PPM1JQ5JR12 505 aa15.58■□□□□ 0.08
VARS-228ENST00000495010 MPZL3Q6UWV2 235 aa15.58■□□□□ 0.08
VARS-228ENST00000495010 SPEM1Q8N4L4 309 aa15.58■□□□□ 0.08
VARS-228ENST00000495010 DDX12PQ92771 950 aa15.58■□□□□ 0.08
VARS-228ENST00000495010 C18orf25Q96B23 403 aaPredicted RBP15.58■□□□□ 0.08
VARS-228ENST00000495010 SUSD3Q96L08 255 aa15.58■□□□□ 0.08
VARS-228ENST00000495010 ZMAT2Q96NC0 199 aaKnown RBP15.58■□□□□ 0.08
VARS-228ENST00000495010 TBC1D32Q96NH3 1257 aa15.58■□□□□ 0.08
VARS-228ENST00000495010 TARS2Q9BW92 718 aaKnown RBP15.58■□□□□ 0.08
VARS-228ENST00000495010 SEMA4GQ9NTN9 838 aa15.58■□□□□ 0.08
VARS-228ENST00000495010 DDX19AQ9NUU7 478 aaKnown RBP15.58■□□□□ 0.08
VARS-228ENST00000495010 CEP72Q9P209 647 aa15.58■□□□□ 0.08
VARS-228ENST00000495010 CNTN3Q9P232 1028 aa15.58■□□□□ 0.08
VARS-228ENST00000495010 RBM19Q9Y4C8 960 aaKnown RBP15.58■□□□□ 0.08
VARS-228ENST00000495010 CHURC1-FNTBB4DL54 471 aa15.57■□□□□ 0.08
VARS-228ENST00000495010 SLC30A4O14863 429 aa15.57■□□□□ 0.08
VARS-228ENST00000495010 CHRNB1P11230 501 aa15.57■□□□□ 0.08
VARS-228ENST00000495010 KCNA4P22459 653 aa15.57■□□□□ 0.08
VARS-228ENST00000495010 CNR2P34972 360 aa15.57■□□□□ 0.08
VARS-228ENST00000495010 FNTBP49356 437 aa15.57■□□□□ 0.08
VARS-228ENST00000495010 STRN3Q13033 797 aa15.57■□□□□ 0.08
VARS-228ENST00000495010 PLD1Q13393 1074 aa15.57■□□□□ 0.08
VARS-228ENST00000495010 ECM1Q16610 540 aa15.57■□□□□ 0.08
VARS-228ENST00000495010 ST3GAL2Q16842 350 aa15.57■□□□□ 0.08
VARS-228ENST00000495010 TTC38Q5R3I4 469 aa15.57■□□□□ 0.08
VARS-228ENST00000495010 RNF19BQ6ZMZ0 732 aa15.57■□□□□ 0.08
VARS-228ENST00000495010 SNX29Q8TEQ0 813 aa15.57■□□□□ 0.08
VARS-228ENST00000495010 C8orf76Q96K31 380 aa15.57■□□□□ 0.08
VARS-228ENST00000495010 DRC1Q96MC2 740 aa15.57■□□□□ 0.08
VARS-228ENST00000495010 RAB34Q9BZG1 259 aa15.57■□□□□ 0.08
VARS-228ENST00000495010 C8orf33Q9H7E9 229 aaPredicted RBP15.57■□□□□ 0.08
VARS-228ENST00000495010 TRPV4Q9HBA0 871 aa15.57■□□□□ 0.08
VARS-228ENST00000495010 PTPRHQ9HD43 1115 aa15.57■□□□□ 0.08
VARS-228ENST00000495010 NOL7Q9UMY1 257 aaKnown RBP15.57■□□□□ 0.08
VARS-228ENST00000495010 PCDHB8Q9UN66 801 aa15.57■□□□□ 0.08
VARS-228ENST00000495010 DNM3Q9UQ16 869 aa15.57■□□□□ 0.08
VARS-228ENST00000495010 TICRRQ7Z2Z1 1910 aa15.56■□□□□ 0.08
VARS-228ENST00000495010 NRG2O14511 850 aaPredicted RBP15.56■□□□□ 0.08
VARS-228ENST00000495010 DPYSL4O14531 572 aa15.56■□□□□ 0.08
VARS-228ENST00000495010 CHADO15335 359 aa15.56■□□□□ 0.08
VARS-228ENST00000495010 FOXD2O60548 495 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms