RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 MGST3O14880 152 aa4.44□□□□□ -1.7
VPS36-205ENST00000492650 PEX1O43933 1283 aa4.44□□□□□ -1.7
VPS36-205ENST00000492650 ZFPL1O95159 310 aa4.44□□□□□ -1.7
VPS36-205ENST00000492650 CDK4P11802 303 aa4.44□□□□□ -1.7
VPS36-205ENST00000492650 CACNA2D1P54289 1103 aa4.44□□□□□ -1.7
VPS36-205ENST00000492650 AKNAD1Q5T1N1 836 aa4.44□□□□□ -1.7
VPS36-205ENST00000492650 KRT26Q7Z3Y9 468 aa4.44□□□□□ -1.7
VPS36-205ENST00000492650 NLGN4YQ8NFZ3 816 aaPredicted RBP4.44□□□□□ -1.7
VPS36-205ENST00000492650 SSH3Q8TE77 659 aa4.44□□□□□ -1.7
VPS36-205ENST00000492650 NRG4Q8WWG1 115 aa4.44□□□□□ -1.7
VPS36-205ENST00000492650 C11orf54Q9H0W9 315 aaPredicted RBP4.44□□□□□ -1.7
VPS36-205ENST00000492650 SEMA4GQ9NTN9 838 aa4.44□□□□□ -1.7
VPS36-205ENST00000492650 FOXJ2Q9P0K8 574 aa4.44□□□□□ -1.7
VPS36-205ENST00000492650 SLC17A6Q9P2U8 582 aa4.44□□□□□ -1.7
VPS36-205ENST00000492650 SETD1BQ9UPS6 1966 aaKnown RBP4.44□□□□□ -1.7
VPS36-205ENST00000492650 MATN4O95460 622 aa4.43□□□□□ -1.7
VPS36-205ENST00000492650 AGXTP21549 392 aa4.43□□□□□ -1.7
VPS36-205ENST00000492650 ERVK-21P61565 698 aa4.43□□□□□ -1.7
VPS36-205ENST00000492650 ATP8B2P98198 1209 aa4.43□□□□□ -1.7
VPS36-205ENST00000492650 KLF1Q13351 362 aaPredicted RBP4.43□□□□□ -1.7
VPS36-205ENST00000492650 SF3B3Q15393 1217 aaKnown RBP4.43□□□□□ -1.7
VPS36-205ENST00000492650 RSPH3Q86UC2 560 aa4.43□□□□□ -1.7
VPS36-205ENST00000492650 CERS3Q8IU89 383 aa4.43□□□□□ -1.7
VPS36-205ENST00000492650 LNX2Q8N448 690 aa4.43□□□□□ -1.7
VPS36-205ENST00000492650 PDLIM2Q96JY6 352 aa4.43□□□□□ -1.7
VPS36-205ENST00000492650 SAP30BPQ9UHR5 308 aaKnown RBP4.43□□□□□ -1.7
VPS36-205ENST00000492650 LRRC3CA6NJW4 275 aa4.42□□□□□ -1.7
VPS36-205ENST00000492650 YY2O15391 372 aa4.42□□□□□ -1.7
VPS36-205ENST00000492650 HAUS5O94927 633 aa4.42□□□□□ -1.7
VPS36-205ENST00000492650 FCER1AP12319 257 aa4.42□□□□□ -1.7
VPS36-205ENST00000492650 CTXN1P60606 82 aa4.42□□□□□ -1.7
VPS36-205ENST00000492650 FPGSQ05932 587 aa4.42□□□□□ -1.7
VPS36-205ENST00000492650 SLFN5Q08AF3 891 aa4.42□□□□□ -1.7
VPS36-205ENST00000492650 HNRNPA0Q13151 305 aaKnown RBP4.42□□□□□ -1.7
VPS36-205ENST00000492650 DACT2Q5SW24 774 aa4.42□□□□□ -1.7
VPS36-205ENST00000492650 UTP14CQ5TAP6 766 aaKnown RBP4.42□□□□□ -1.7
VPS36-205ENST00000492650 PGM2L1Q6PCE3 622 aa4.42□□□□□ -1.7
VPS36-205ENST00000492650 MIGA2Q7L4E1 593 aa4.42□□□□□ -1.7
VPS36-205ENST00000492650 RAB24Q969Q5 203 aa4.42□□□□□ -1.7
VPS36-205ENST00000492650 TMEM125Q96AQ2 219 aa4.42□□□□□ -1.7
VPS36-205ENST00000492650 TMX3Q96JJ7 454 aa4.42□□□□□ -1.7
VPS36-205ENST00000492650 KLK15Q9H2R5 256 aa4.42□□□□□ -1.7
VPS36-205ENST00000492650 ZNF277Q9NRM2 450 aaPredicted RBP4.42□□□□□ -1.7
VPS36-205ENST00000492650 IL17RBQ9NRM6 502 aa4.42□□□□□ -1.7
VPS36-205ENST00000492650 TDP1Q9NUW8 608 aa4.42□□□□□ -1.7
VPS36-205ENST00000492650 ASB6Q9NWX5 421 aa4.42□□□□□ -1.7
VPS36-205ENST00000492650 PCDHA13Q9Y5I0 950 aa4.42□□□□□ -1.7
VPS36-205ENST00000492650 ORC4O43929 436 aa4.41□□□□□ -1.7
VPS36-205ENST00000492650 AGFG2O95081 481 aa4.41□□□□□ -1.7
VPS36-205ENST00000492650 VIL1P09327 827 aaKnown RBP4.41□□□□□ -1.7
VPS36-205ENST00000492650 MTHFD1P11586 935 aaKnown RBP4.41□□□□□ -1.7
VPS36-205ENST00000492650 FOLR3P41439 243 aa4.41□□□□□ -1.7
VPS36-205ENST00000492650 ACAP2Q15057 778 aa4.41□□□□□ -1.7
VPS36-205ENST00000492650 KAZNQ674X7 775 aa4.41□□□□□ -1.7
VPS36-205ENST00000492650 CLNKQ7Z7G1 428 aa4.41□□□□□ -1.7
VPS36-205ENST00000492650 DCBLD1Q8N8Z6 715 aa4.41□□□□□ -1.7
VPS36-205ENST00000492650 FBXL20Q96IG2 436 aa4.41□□□□□ -1.7
VPS36-205ENST00000492650 TLR10Q9BXR5 811 aa4.41□□□□□ -1.7
VPS36-205ENST00000492650 CDYLQ9Y232 598 aa4.41□□□□□ -1.7
VPS36-205ENST00000492650 PRAMEF33A0A0G2JMD5 474 aa4.4□□□□□ -1.71
VPS36-205ENST00000492650 GRM6O15303 877 aa4.4□□□□□ -1.71
VPS36-205ENST00000492650 PRAMEF10O60809 474 aa4.4□□□□□ -1.71
VPS36-205ENST00000492650 C1QL1O75973 258 aa4.4□□□□□ -1.71
VPS36-205ENST00000492650 SBK3P0C264 359 aa4.4□□□□□ -1.71
VPS36-205ENST00000492650 SLC6A4P31645 630 aa4.4□□□□□ -1.71
VPS36-205ENST00000492650 RPS7P62081 194 aaKnown RBP4.4□□□□□ -1.71
VPS36-205ENST00000492650 ZNF844Q08AG5 666 aa4.4□□□□□ -1.71
VPS36-205ENST00000492650 PREPLQ4J6C6 727 aaPredicted RBP4.4□□□□□ -1.71
VPS36-205ENST00000492650 VWA1Q6PCB0 445 aa4.4□□□□□ -1.71
VPS36-205ENST00000492650 NOL8Q76FK4 1167 aaKnown RBP4.4□□□□□ -1.71
VPS36-205ENST00000492650 CNTD1Q8N815 330 aa4.4□□□□□ -1.71
VPS36-205ENST00000492650 Q8NA96 180 aa4.4□□□□□ -1.71
VPS36-205ENST00000492650 TOR1AIP2Q8NFQ8 470 aa4.4□□□□□ -1.71
VPS36-205ENST00000492650 PACSIN1Q9BY11 444 aa4.4□□□□□ -1.71
VPS36-205ENST00000492650 FAM126AQ9BYI3 521 aaPredicted RBP4.4□□□□□ -1.71
VPS36-205ENST00000492650 INTS13Q9NVM9 706 aa4.4□□□□□ -1.71
VPS36-205ENST00000492650 MKS1Q9NXB0 559 aa4.4□□□□□ -1.71
VPS36-205ENST00000492650 SLC5A4Q9NY91 659 aa4.4□□□□□ -1.71
VPS36-205ENST00000492650 FRMD4BQ9Y2L6 1034 aa4.4□□□□□ -1.71
VPS36-205ENST00000492650 PHLDB1Q86UU1 1377 aa4.4□□□□□ -1.71
VPS36-205ENST00000492650 A0A1W2PS29 197 aa4.39□□□□□ -1.71
VPS36-205ENST00000492650 K7ESF4 209 aa4.39□□□□□ -1.71
VPS36-205ENST00000492650 NDUFS2O75306 463 aa4.39□□□□□ -1.71
VPS36-205ENST00000492650 RBMXL2O75526 392 aaKnown RBP4.39□□□□□ -1.71
VPS36-205ENST00000492650 KCNA2P16389 499 aa4.39□□□□□ -1.71
VPS36-205ENST00000492650 GATA3P23771 443 aa4.39□□□□□ -1.71
VPS36-205ENST00000492650 SLC16A1P53985 500 aa4.39□□□□□ -1.71
VPS36-205ENST00000492650 NHLH1Q02575 133 aa4.39□□□□□ -1.71
VPS36-205ENST00000492650 TARDBPQ13148 414 aaKnown RBP eCLIP4.39□□□□□ -1.71
VPS36-205ENST00000492650 CD300EQ496F6 205 aaPredicted RBP4.39□□□□□ -1.71
VPS36-205ENST00000492650 PABPC1LQ4VXU2 614 aaKnown RBP4.39□□□□□ -1.71
VPS36-205ENST00000492650 TSHZ1Q6ZSZ6 1077 aa4.39□□□□□ -1.71
VPS36-205ENST00000492650 GRASPQ7Z6J2 395 aaPredicted RBP4.39□□□□□ -1.71
VPS36-205ENST00000492650 FAM9AQ8IZU1 332 aaPredicted RBP4.39□□□□□ -1.71
VPS36-205ENST00000492650 SLC30A5Q8TAD4 765 aa4.39□□□□□ -1.71
VPS36-205ENST00000492650 SSH1Q8WYL5 1049 aa4.39□□□□□ -1.71
VPS36-205ENST00000492650 TFAP2BQ92481 460 aa4.39□□□□□ -1.71
VPS36-205ENST00000492650 HDAC10Q969S8 669 aa4.39□□□□□ -1.71
VPS36-205ENST00000492650 CPNE5Q9HCH3 593 aa4.39□□□□□ -1.71
VPS36-205ENST00000492650 MCM8Q9UJA3 840 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms