RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 UTRNP46939 3433 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 SHTN1A0MZ66 631 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 PRAMEF27A3QJZ7 478 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 GTPBP10A4D1E9 387 aaKnown RBP6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 MEIS1O00470 390 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 CHMP2AO43633 222 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 ZBED4O75132 1171 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 RAD17O75943 681 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 GFPT2O94808 682 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 LRIG2O94898 1065 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 ZRANB2O95218 330 aaKnown RBP eCLIP6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 LCA5LO95447 670 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 NR3C1P04150 777 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 CD8BP10966 210 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 KRT13P13646 458 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 ITGB5P18084 799 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 RPS12P25398 132 aaKnown RBP6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 POLD1P28340 1107 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 TNNT3P45378 269 aaPredicted RBP6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 KLK7P49862 253 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 SNAP25P60880 206 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 CYP4A11Q02928 519 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 ITIH3Q06033 890 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 MYBPC2Q14324 1141 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 EPHA7Q15375 998 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 CLUL1Q15846 466 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 NFIL3Q16649 462 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 EXOC3L4Q17RC7 722 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 BMT2Q1RMZ1 405 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 DCAF17Q5H9S7 520 aaPredicted RBP6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 TAF3Q5VWG9 929 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 DCAF15Q66K64 600 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 CIAPIN1Q6FI81 312 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 WDR93Q6P2C0 686 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 WDR59Q6PJI9 974 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 DNAJC14Q6Y2X3 702 aaPredicted RBP6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 ARMCX6Q7L4S7 300 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 MIER3Q7Z3K6 550 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 USP37Q86T82 979 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 TRIM59Q8IWR1 403 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 FAM178BQ8IXR5 827 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 ZC3H3Q8IXZ2 948 aaKnown RBP6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 SYCP3Q8IZU3 236 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 MSL3Q8N5Y2 521 aaKnown RBP6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 LRRN4CLQ8ND94 238 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 SMCR8Q8TEV9 937 aaPredicted RBP6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 LRRC15Q8TF66 581 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 SCFD1Q8WVM8 642 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 CRYGNQ8WXF5 182 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 SLC5A5Q92911 643 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 EEF2KMTQ96G04 330 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 HRASLS5Q96KN8 279 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 RUFY1Q96T51 708 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 REEP2Q9BRK0 252 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 CRACR2AQ9BSW2 395 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 SELENOOQ9BVL4 669 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 TNKS2Q9H2K2 1166 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 AS3MTQ9HBK9 375 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 MED4Q9NPJ6 270 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 NLRC4Q9NPP4 1024 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 PLCB1Q9NQ66 1216 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 PARP2Q9UGN5 583 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 RAB21Q9UL25 225 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 SNX12Q9UMY4 172 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 EXOC7Q9UPT5 735 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 FHOD1Q9Y613 1164 aa6.39□□□□□ -1.39
ATPAF1-204ENST00000474020 NPHP3-ACAD11A0A0J9YXS1 232 aa6.38□□□□□ -1.39
ATPAF1-204ENST00000474020 YDJCA8MPS7 323 aa6.38□□□□□ -1.39
ATPAF1-204ENST00000474020 FAM86B1E9PN63 330 aa6.38□□□□□ -1.39
ATPAF1-204ENST00000474020 RBAK-RBAKDNI3L0D1 243 aa6.38□□□□□ -1.39
ATPAF1-204ENST00000474020 PJA2O43164 708 aa6.38□□□□□ -1.39
ATPAF1-204ENST00000474020 EOMESO95936 686 aa6.38□□□□□ -1.39
ATPAF1-204ENST00000474020 ATP1A1P05023 1023 aaKnown RBP6.38□□□□□ -1.39
ATPAF1-204ENST00000474020 ICAM1P05362 532 aa6.38□□□□□ -1.39
ATPAF1-204ENST00000474020 FAM86B2P0C5J1 330 aa6.38□□□□□ -1.39
ATPAF1-204ENST00000474020 FERP16591 822 aa6.38□□□□□ -1.39
ATPAF1-204ENST00000474020 YBX3P16989 372 aaKnown RBP eCLIP6.38□□□□□ -1.39
ATPAF1-204ENST00000474020 ITIH2P19823 946 aa6.38□□□□□ -1.39
ATPAF1-204ENST00000474020 LMNB1P20700 586 aa6.38□□□□□ -1.39
ATPAF1-204ENST00000474020 FUT4P22083 530 aa6.38□□□□□ -1.39
ATPAF1-204ENST00000474020 ABCD1P33897 745 aa6.38□□□□□ -1.39
ATPAF1-204ENST00000474020 STAT1P42224 750 aa6.38□□□□□ -1.39
ATPAF1-204ENST00000474020 JAK3P52333 1124 aa6.38□□□□□ -1.39
ATPAF1-204ENST00000474020 SNRPFP62306 86 aaKnown RBP6.38□□□□□ -1.39
ATPAF1-204ENST00000474020 TNNC1P63316 161 aa6.38□□□□□ -1.39
ATPAF1-204ENST00000474020 DAB2P98082 770 aa6.38□□□□□ -1.39
ATPAF1-204ENST00000474020 AMPD2Q01433 879 aa6.38□□□□□ -1.39
ATPAF1-204ENST00000474020 SPIRE1Q08AE8 756 aa6.38□□□□□ -1.39
ATPAF1-204ENST00000474020 RAD51AP2Q09MP3 1159 aa6.38□□□□□ -1.39
ATPAF1-204ENST00000474020 CTTNQ14247 550 aaKnown RBP6.38□□□□□ -1.39
ATPAF1-204ENST00000474020 SMC1AQ14683 1233 aaKnown RBP6.38□□□□□ -1.39
ATPAF1-204ENST00000474020 PPP2R5AQ15172 486 aa6.38□□□□□ -1.39
ATPAF1-204ENST00000474020 ZYXQ15942 572 aaKnown RBP6.38□□□□□ -1.39
ATPAF1-204ENST00000474020 SLC18A3Q16572 532 aa6.38□□□□□ -1.39
ATPAF1-204ENST00000474020 ZNF792Q3KQV3 632 aa6.38□□□□□ -1.39
ATPAF1-204ENST00000474020 CFAP221Q4G0U5 840 aa6.38□□□□□ -1.39
ATPAF1-204ENST00000474020 GLE1Q53GS7 698 aaKnown RBP6.38□□□□□ -1.39
ATPAF1-204ENST00000474020 WIPI1Q5MNZ9 446 aaPredicted RBP6.38□□□□□ -1.39
ATPAF1-204ENST00000474020 XRRA1Q6P2D8 792 aa6.38□□□□□ -1.39
ATPAF1-204ENST00000474020 LDHDQ86WU2 507 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms