RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 TWF1Q12792 350 aa20.84■□□□□ 0.93
NCKIPSD-209ENST00000470006 COL9A2Q14055 689 aaPredicted RBP20.84■□□□□ 0.93
NCKIPSD-209ENST00000470006 TEAD2Q15562 447 aa20.84■□□□□ 0.93
NCKIPSD-209ENST00000470006 CTXN3Q4LDR2 81 aa20.84■□□□□ 0.93
NCKIPSD-209ENST00000470006 EARS2Q5JPH6 523 aaKnown RBP20.84■□□□□ 0.93
NCKIPSD-209ENST00000470006 C1orf228Q6PIY5 440 aa20.84■□□□□ 0.93
NCKIPSD-209ENST00000470006 Q6ZS52 159 aa20.84■□□□□ 0.93
NCKIPSD-209ENST00000470006 APBB1IPQ7Z5R6 666 aaPredicted RBP20.84■□□□□ 0.93
NCKIPSD-209ENST00000470006 TTC8Q8TAM2 541 aa20.84■□□□□ 0.93
NCKIPSD-209ENST00000470006 MSANTD3Q96H12 275 aa20.84■□□□□ 0.93
NCKIPSD-209ENST00000470006 C8orf33Q9H7E9 229 aaPredicted RBP20.84■□□□□ 0.93
NCKIPSD-209ENST00000470006 NUB1Q9Y5A7 615 aa20.84■□□□□ 0.93
NCKIPSD-209ENST00000470006 GREB1Q4ZG55 1949 aa20.84■□□□□ 0.93
NCKIPSD-209ENST00000470006 LIMK1P53667 647 aa20.83■□□□□ 0.93
NCKIPSD-209ENST00000470006 DGKKQ5KSL6 1271 aa20.83■□□□□ 0.93
NCKIPSD-209ENST00000470006 TPGS2Q68CL5 300 aa20.83■□□□□ 0.93
NCKIPSD-209ENST00000470006 GPIHBP1Q8IV16 184 aa20.83■□□□□ 0.93
NCKIPSD-209ENST00000470006 BSNDQ8WZ55 320 aa20.83■□□□□ 0.93
NCKIPSD-209ENST00000470006 E2F7Q96AV8 911 aa20.83■□□□□ 0.93
NCKIPSD-209ENST00000470006 SMIM28A0A1B0GU29 152 aa20.82■□□□□ 0.92
NCKIPSD-209ENST00000470006 PODXLO00592 558 aa20.82■□□□□ 0.92
NCKIPSD-209ENST00000470006 DTNBO60941 627 aa20.82■□□□□ 0.92
NCKIPSD-209ENST00000470006 MLLT6P55198 1093 aaPredicted RBP20.82■□□□□ 0.92
NCKIPSD-209ENST00000470006 OSTNP61366 133 aa20.82■□□□□ 0.92
NCKIPSD-209ENST00000470006 SHC2P98077 582 aa20.82■□□□□ 0.92
NCKIPSD-209ENST00000470006 STPG1Q5TH74 334 aa20.82■□□□□ 0.92
NCKIPSD-209ENST00000470006 ATF7IP2Q5U623 682 aa20.82■□□□□ 0.92
NCKIPSD-209ENST00000470006 LEMD2Q8NC56 503 aa20.82■□□□□ 0.92
NCKIPSD-209ENST00000470006 GPR88Q9GZN0 384 aa20.82■□□□□ 0.92
NCKIPSD-209ENST00000470006 BRMS1Q9HCU9 246 aa20.82■□□□□ 0.92
NCKIPSD-209ENST00000470006 CEP72Q9P209 647 aa20.82■□□□□ 0.92
NCKIPSD-209ENST00000470006 FBXL5Q9UKA1 691 aa20.82■□□□□ 0.92
NCKIPSD-209ENST00000470006 FRYQ5TBA9 3013 aa20.82■□□□□ 0.92
NCKIPSD-209ENST00000470006 SPAG17Q6Q759 2223 aa20.81■□□□□ 0.92
NCKIPSD-209ENST00000470006 SYN3O14994 580 aa20.81■□□□□ 0.92
NCKIPSD-209ENST00000470006 MOSPD3O75425 235 aa20.81■□□□□ 0.92
NCKIPSD-209ENST00000470006 PAPSS2O95340 614 aaPredicted RBP20.81■□□□□ 0.92
NCKIPSD-209ENST00000470006 EDN1P05305 212 aa20.81■□□□□ 0.92
NCKIPSD-209ENST00000470006 ZNF806P0C7X5 589 aa20.81■□□□□ 0.92
NCKIPSD-209ENST00000470006 CPB1P15086 417 aa20.81■□□□□ 0.92
NCKIPSD-209ENST00000470006 KRT2P35908 639 aa20.81■□□□□ 0.92
NCKIPSD-209ENST00000470006 NAMPTP43490 491 aa20.81■□□□□ 0.92
NCKIPSD-209ENST00000470006 NR5A1Q13285 461 aa20.81■□□□□ 0.92
NCKIPSD-209ENST00000470006 WDR5BQ86VZ2 330 aa20.81■□□□□ 0.92
NCKIPSD-209ENST00000470006 IFT74Q96LB3 600 aa20.81■□□□□ 0.92
NCKIPSD-209ENST00000470006 KIFC3Q9BVG8 833 aa20.81■□□□□ 0.92
NCKIPSD-209ENST00000470006 CCDC94Q9BW85 323 aaPredicted RBP20.81■□□□□ 0.92
NCKIPSD-209ENST00000470006 CCDC113Q9H0I3 377 aa20.81■□□□□ 0.92
NCKIPSD-209ENST00000470006 TRPV4Q9HBA0 871 aa20.81■□□□□ 0.92
NCKIPSD-209ENST00000470006 ZSWIM6Q9HCJ5 1215 aa20.81■□□□□ 0.92
NCKIPSD-209ENST00000470006 TOPORSQ9NS56 1045 aaPredicted RBP20.81■□□□□ 0.92
NCKIPSD-209ENST00000470006 RXFP3Q9NSD7 469 aa20.81■□□□□ 0.92
NCKIPSD-209ENST00000470006 SLC38A7Q9NVC3 462 aa20.81■□□□□ 0.92
NCKIPSD-209ENST00000470006 C2orf42Q9NWW7 574 aa20.81■□□□□ 0.92
NCKIPSD-209ENST00000470006 ARHGEF35A5YM69 484 aa20.8■□□□□ 0.92
NCKIPSD-209ENST00000470006 SPECC1L-ADORA2AF8WAN1 911 aa20.8■□□□□ 0.92
NCKIPSD-209ENST00000470006 DPYSL4O14531 572 aa20.8■□□□□ 0.92
NCKIPSD-209ENST00000470006 CHADO15335 359 aa20.8■□□□□ 0.92
NCKIPSD-209ENST00000470006 NEMFO60524 1076 aa20.8■□□□□ 0.92
NCKIPSD-209ENST00000470006 PROS1P07225 676 aa20.8■□□□□ 0.92
NCKIPSD-209ENST00000470006 CCDC192P0DO97 292 aa20.8■□□□□ 0.92
NCKIPSD-209ENST00000470006 SOX4Q06945 474 aaPredicted RBP20.8■□□□□ 0.92
NCKIPSD-209ENST00000470006 PON2Q15165 354 aa20.8■□□□□ 0.92
NCKIPSD-209ENST00000470006 PPP2R5AQ15172 486 aa20.8■□□□□ 0.92
NCKIPSD-209ENST00000470006 ZNF280DQ6N043 979 aa20.8■□□□□ 0.92
NCKIPSD-209ENST00000470006 PADI6Q6TGC4 694 aa20.8■□□□□ 0.92
NCKIPSD-209ENST00000470006 NACC1Q96RE7 527 aa20.8■□□□□ 0.92
NCKIPSD-209ENST00000470006 NCANO14594 1321 aa20.79■□□□□ 0.92
NCKIPSD-209ENST00000470006 ARNTLO00327 626 aa20.79■□□□□ 0.92
NCKIPSD-209ENST00000470006 RPP40O75818 363 aaKnown RBP20.79■□□□□ 0.92
NCKIPSD-209ENST00000470006 REC8O95072 547 aa20.79■□□□□ 0.92
NCKIPSD-209ENST00000470006 KCNK5O95279 499 aa20.79■□□□□ 0.92
NCKIPSD-209ENST00000470006 MARCKSP29966 332 aaPredicted RBP20.79■□□□□ 0.92
NCKIPSD-209ENST00000470006 HOXC13P31276 330 aa20.79■□□□□ 0.92
NCKIPSD-209ENST00000470006 PXNP49023 591 aaPredicted RBP20.79■□□□□ 0.92
NCKIPSD-209ENST00000470006 NT5DC1Q5TFE4 455 aa20.79■□□□□ 0.92
NCKIPSD-209ENST00000470006 TXNDC11Q6PKC3 985 aa20.79■□□□□ 0.92
NCKIPSD-209ENST00000470006 CACNA2D4Q7Z3S7 1137 aa20.79■□□□□ 0.92
NCKIPSD-209ENST00000470006 HAUS6Q7Z4H7 955 aa20.79■□□□□ 0.92
NCKIPSD-209ENST00000470006 SHKBP1Q8TBC3 707 aa20.79■□□□□ 0.92
NCKIPSD-209ENST00000470006 POLD4Q9HCU8 107 aa20.79■□□□□ 0.92
NCKIPSD-209ENST00000470006 AFF4Q9UHB7 1163 aaKnown RBP20.79■□□□□ 0.92
NCKIPSD-209ENST00000470006 A0A1W2PRU2 124 aa20.78■□□□□ 0.92
NCKIPSD-209ENST00000470006 TM4SF5O14894 197 aa20.78■□□□□ 0.92
NCKIPSD-209ENST00000470006 CTHP32929 405 aa20.78■□□□□ 0.92
NCKIPSD-209ENST00000470006 MCM4P33991 863 aa20.78■□□□□ 0.92
NCKIPSD-209ENST00000470006 EFNA5P52803 228 aa20.78■□□□□ 0.92
NCKIPSD-209ENST00000470006 SCRN1Q12765 414 aa20.78■□□□□ 0.92
NCKIPSD-209ENST00000470006 PSAPL1Q6NUJ1 521 aa20.78■□□□□ 0.92
NCKIPSD-209ENST00000470006 KBTBD6Q86V97 674 aa20.78■□□□□ 0.92
NCKIPSD-209ENST00000470006 RALGPS2Q86X27 583 aaPredicted RBP20.78■□□□□ 0.92
NCKIPSD-209ENST00000470006 CATSPER3Q86XQ3 398 aa20.78■□□□□ 0.92
NCKIPSD-209ENST00000470006 APPL2Q8NEU8 664 aa20.78■□□□□ 0.92
NCKIPSD-209ENST00000470006 RSPRY1Q96DX4 576 aa20.78■□□□□ 0.92
NCKIPSD-209ENST00000470006 LOXL4Q96JB6 756 aa20.78■□□□□ 0.92
NCKIPSD-209ENST00000470006 ZFYVE19Q96K21 471 aa20.78■□□□□ 0.92
NCKIPSD-209ENST00000470006 SMOC1Q9H4F8 434 aa20.78■□□□□ 0.92
NCKIPSD-209ENST00000470006 TUFT1Q9NNX1 390 aa20.78■□□□□ 0.92
NCKIPSD-209ENST00000470006 GTSE1Q9NYZ3 720 aa20.78■□□□□ 0.92
NCKIPSD-209ENST00000470006 MYBPHLA2RUH7 354 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms