RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 SGPL1O95470 568 aa14.55□□□□□ -0.08
BRAT1-203ENST00000467558 PAMP19021 973 aa14.55□□□□□ -0.08
BRAT1-203ENST00000467558 PCSK1P29120 753 aa14.55□□□□□ -0.08
BRAT1-203ENST00000467558 SERPINB6P35237 376 aa14.55□□□□□ -0.08
BRAT1-203ENST00000467558 ACADSBP45954 432 aa14.55□□□□□ -0.08
BRAT1-203ENST00000467558 ATG16L1Q676U5 607 aa14.55□□□□□ -0.08
BRAT1-203ENST00000467558 ITPRIPL1Q6GPH6 555 aa14.55□□□□□ -0.08
BRAT1-203ENST00000467558 MTMR12Q9C0I1 747 aa14.55□□□□□ -0.08
BRAT1-203ENST00000467558 KLHL11Q9NVR0 708 aa14.55□□□□□ -0.08
BRAT1-203ENST00000467558 GOLGA8QA0A0J9YX86 632 aa14.55□□□□□ -0.08
BRAT1-203ENST00000467558 WDR91A4D1P6 747 aa14.55□□□□□ -0.08
BRAT1-203ENST00000467558 GOLGA8OA6NCC3 632 aa14.55□□□□□ -0.08
BRAT1-203ENST00000467558 GOLGA8NF8WBI6 632 aa14.55□□□□□ -0.08
BRAT1-203ENST00000467558 H3BRB1 525 aa14.55□□□□□ -0.08
BRAT1-203ENST00000467558 RAD51CO43502 376 aa14.55□□□□□ -0.08
BRAT1-203ENST00000467558 BRAFP15056 766 aa14.55□□□□□ -0.08
BRAT1-203ENST00000467558 PAPD7Q5XG87 772 aaKnown RBP14.55□□□□□ -0.08
BRAT1-203ENST00000467558 ZNF571Q7Z3V5 609 aaPredicted RBP14.55□□□□□ -0.08
BRAT1-203ENST00000467558 EPAS1Q99814 870 aa14.55□□□□□ -0.08
BRAT1-203ENST00000467558 TRIM51Q9BSJ1 452 aa14.55□□□□□ -0.08
BRAT1-203ENST00000467558 ZBED2Q9BTP6 218 aa14.55□□□□□ -0.08
BRAT1-203ENST00000467558 PITPNM3Q9BZ71 974 aa14.55□□□□□ -0.08
BRAT1-203ENST00000467558 TUT1Q9H6E5 874 aaKnown RBP14.55□□□□□ -0.08
BRAT1-203ENST00000467558 FAM49BQ9NUQ9 324 aa14.55□□□□□ -0.08
BRAT1-203ENST00000467558 RRP15Q9Y3B9 282 aaKnown RBP14.55□□□□□ -0.08
BRAT1-203ENST00000467558 PIK3R2O00459 728 aa14.55□□□□□ -0.08
BRAT1-203ENST00000467558 KLRC4O43908 158 aa14.55□□□□□ -0.08
BRAT1-203ENST00000467558 APOEP02649 317 aa14.55□□□□□ -0.08
BRAT1-203ENST00000467558 CPB1P15086 417 aa14.55□□□□□ -0.08
BRAT1-203ENST00000467558 BRD2P25440 801 aaKnown RBP14.55□□□□□ -0.08
BRAT1-203ENST00000467558 TPD52P55327 224 aaPredicted RBP14.55□□□□□ -0.08
BRAT1-203ENST00000467558 HIF1AQ16665 826 aa14.55□□□□□ -0.08
BRAT1-203ENST00000467558 EPM2AIP1Q7L775 607 aaPredicted RBP14.55□□□□□ -0.08
BRAT1-203ENST00000467558 JAMLQ86YT9 394 aa14.55□□□□□ -0.08
BRAT1-203ENST00000467558 SIK2Q9H0K1 926 aa14.55□□□□□ -0.08
BRAT1-203ENST00000467558 PPP1R12AO14974 1030 aaPredicted RBP14.54□□□□□ -0.08
BRAT1-203ENST00000467558 CNTN2Q02246 1040 aa14.54□□□□□ -0.08
BRAT1-203ENST00000467558 CATSPERGQ6ZRH7 1159 aa14.54□□□□□ -0.08
BRAT1-203ENST00000467558 C1orf186Q6ZWK4 172 aa14.54□□□□□ -0.08
BRAT1-203ENST00000467558 AFG1LQ8WV93 481 aa14.54□□□□□ -0.08
BRAT1-203ENST00000467558 POP1Q99575 1024 aaKnown RBP14.54□□□□□ -0.08
BRAT1-203ENST00000467558 FSD1LQ9BXM9 530 aa14.54□□□□□ -0.08
BRAT1-203ENST00000467558 KIAA1257Q9ULG3 409 aa14.54□□□□□ -0.08
BRAT1-203ENST00000467558 AP1B1Q10567 949 aa14.54□□□□□ -0.08
BRAT1-203ENST00000467558 STAT4Q14765 748 aa14.54□□□□□ -0.08
BRAT1-203ENST00000467558 IL17AQ16552 155 aa14.54□□□□□ -0.08
BRAT1-203ENST00000467558 SPOPLQ6IQ16 392 aa14.54□□□□□ -0.08
BRAT1-203ENST00000467558 USP50Q70EL3 339 aaPredicted RBP14.54□□□□□ -0.08
BRAT1-203ENST00000467558 SPATA24Q86W54 205 aa14.54□□□□□ -0.08
BRAT1-203ENST00000467558 HNRNPLLQ8WVV9 542 aaKnown RBP14.54□□□□□ -0.08
BRAT1-203ENST00000467558 KLHL29Q96CT2 875 aa14.54□□□□□ -0.08
BRAT1-203ENST00000467558 HDAC11Q96DB2 347 aa14.54□□□□□ -0.08
BRAT1-203ENST00000467558 ERP44Q9BS26 406 aa14.54□□□□□ -0.08
BRAT1-203ENST00000467558 GLIS2Q9BZE0 524 aaPredicted RBP14.54□□□□□ -0.08
BRAT1-203ENST00000467558 FOXP3Q9BZS1 431 aa14.54□□□□□ -0.08
BRAT1-203ENST00000467558 VCXQ9H320 206 aa14.54□□□□□ -0.08
BRAT1-203ENST00000467558 TACC3Q9Y6A5 838 aa14.54□□□□□ -0.08
BRAT1-203ENST00000467558 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.54□□□□□ -0.08
BRAT1-203ENST00000467558 C17orf102A2RUQ5 167 aa14.54□□□□□ -0.08
BRAT1-203ENST00000467558 NKRFO15226 690 aaKnown RBP eCLIP14.54□□□□□ -0.08
BRAT1-203ENST00000467558 PLA2G6O60733 806 aa14.54□□□□□ -0.08
BRAT1-203ENST00000467558 PMLP29590 882 aa14.54□□□□□ -0.08
BRAT1-203ENST00000467558 TAF6P49848 677 aa14.54□□□□□ -0.08
BRAT1-203ENST00000467558 HSD17B4P51659 736 aa14.54□□□□□ -0.08
BRAT1-203ENST00000467558 FCGRTP55899 365 aa14.54□□□□□ -0.08
BRAT1-203ENST00000467558 VGLL4Q14135 290 aa14.54□□□□□ -0.08
BRAT1-203ENST00000467558 MAP1SQ66K74 1059 aaPredicted RBP14.54□□□□□ -0.08
BRAT1-203ENST00000467558 GLB1LQ6UWU2 654 aa14.54□□□□□ -0.08
BRAT1-203ENST00000467558 PPM1NQ8N819 430 aa14.54□□□□□ -0.08
BRAT1-203ENST00000467558 VCX3BQ9H321 246 aa14.54□□□□□ -0.08
BRAT1-203ENST00000467558 DPP3Q9NY33 737 aa14.54□□□□□ -0.08
BRAT1-203ENST00000467558 LAMTOR4Q0VGL1 99 aa14.53□□□□□ -0.08
BRAT1-203ENST00000467558 BYSLQ13895 437 aaKnown RBP14.53□□□□□ -0.08
BRAT1-203ENST00000467558 MAP7Q14244 749 aa14.53□□□□□ -0.08
BRAT1-203ENST00000467558 LY6KQ17RY6 165 aa14.53□□□□□ -0.08
BRAT1-203ENST00000467558 TAF1BQ53T94 588 aaPredicted RBP14.53□□□□□ -0.08
BRAT1-203ENST00000467558 PHLDB3Q6NSJ2 640 aa14.53□□□□□ -0.08
BRAT1-203ENST00000467558 TRMT10CQ7L0Y3 403 aaKnown RBP14.53□□□□□ -0.08
BRAT1-203ENST00000467558 SPATA2LQ8IUW3 424 aaPredicted RBP14.53□□□□□ -0.08
BRAT1-203ENST00000467558 WDR49Q8IV35 697 aa14.53□□□□□ -0.08
BRAT1-203ENST00000467558 C1orf131Q8NDD1 294 aaKnown RBP14.53□□□□□ -0.08
BRAT1-203ENST00000467558 MCUQ8NE86 351 aa14.53□□□□□ -0.08
BRAT1-203ENST00000467558 RSAD1Q9HA92 442 aa14.53□□□□□ -0.08
BRAT1-203ENST00000467558 A0A0A6YYK5 440 aaPredicted RBP14.53□□□□□ -0.08
BRAT1-203ENST00000467558 A0A1B0GUA9 196 aa14.53□□□□□ -0.08
BRAT1-203ENST00000467558 CFAP69A5D8W1 941 aa14.53□□□□□ -0.08
BRAT1-203ENST00000467558 PDHXO00330 501 aa14.53□□□□□ -0.08
BRAT1-203ENST00000467558 ZBTB39O15060 712 aa14.53□□□□□ -0.08
BRAT1-203ENST00000467558 SLC4A1P02730 911 aa14.53□□□□□ -0.08
BRAT1-203ENST00000467558 GNL1P36915 607 aaPredicted RBP14.53□□□□□ -0.08
BRAT1-203ENST00000467558 DNAJC19Q96DA6 116 aa14.53□□□□□ -0.08
BRAT1-203ENST00000467558 ZSWIM1Q9BR11 485 aa14.53□□□□□ -0.08
BRAT1-203ENST00000467558 SOX10P56693 466 aa14.53□□□□□ -0.08
BRAT1-203ENST00000467558 PID1Q7Z2X4 250 aa14.53□□□□□ -0.08
BRAT1-203ENST00000467558 GBP7Q8N8V2 638 aaPredicted RBP14.53□□□□□ -0.08
BRAT1-203ENST00000467558 GLT1D1Q96MS3 346 aa14.53□□□□□ -0.08
BRAT1-203ENST00000467558 ELAC2Q9BQ52 826 aaKnown RBP14.53□□□□□ -0.08
BRAT1-203ENST00000467558 TUBB6Q9BUF5 446 aa14.53□□□□□ -0.08
BRAT1-203ENST00000467558 PACSIN1Q9BY11 444 aa14.53□□□□□ -0.08
BRAT1-203ENST00000467558 CCDC160A6NGH7 325 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms