RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 TOPORSQ9NS56 1045 aaPredicted RBP20.78■□□□□ 0.92
USP11-205ENST00000467378 MAPK8IP1Q9UQF2 711 aa20.78■□□□□ 0.92
USP11-205ENST00000467378 CLIC2O15247 247 aa20.77■□□□□ 0.92
USP11-205ENST00000467378 B4GALT3O60512 393 aa20.77■□□□□ 0.92
USP11-205ENST00000467378 KRT37O76014 449 aa20.77■□□□□ 0.92
USP11-205ENST00000467378 MBD3O95983 291 aa20.77■□□□□ 0.92
USP11-205ENST00000467378 LDHAP00338 332 aaKnown RBP20.77■□□□□ 0.92
USP11-205ENST00000467378 ADRB2P07550 413 aa20.77■□□□□ 0.92
USP11-205ENST00000467378 BMP6P22004 513 aa20.77■□□□□ 0.92
USP11-205ENST00000467378 PRCPP42785 496 aa20.77■□□□□ 0.92
USP11-205ENST00000467378 ACOT2P49753 483 aa20.77■□□□□ 0.92
USP11-205ENST00000467378 MORC3Q14149 939 aa20.77■□□□□ 0.92
USP11-205ENST00000467378 NAB2Q15742 525 aa20.77■□□□□ 0.92
USP11-205ENST00000467378 KCNT2Q6UVM3 1135 aa20.77■□□□□ 0.92
USP11-205ENST00000467378 C12orf56Q8IXR9 622 aa20.77■□□□□ 0.92
USP11-205ENST00000467378 DTWD2Q8NBA8 298 aa20.77■□□□□ 0.92
USP11-205ENST00000467378 RPS6KC1Q96S38 1066 aa20.77■□□□□ 0.92
USP11-205ENST00000467378 GTPBP4Q9BZE4 634 aaKnown RBP20.77■□□□□ 0.92
USP11-205ENST00000467378 NUP62CLQ9H1M0 184 aa20.77■□□□□ 0.92
USP11-205ENST00000467378 CGNQ9P2M7 1197 aaKnown RBP20.77■□□□□ 0.92
USP11-205ENST00000467378 SMIM28A0A1B0GU29 152 aa20.76■□□□□ 0.91
USP11-205ENST00000467378 TTC26A0AVF1 554 aa20.76■□□□□ 0.91
USP11-205ENST00000467378 PDXKO00764 312 aa20.76■□□□□ 0.91
USP11-205ENST00000467378 KIAA0391O15091 583 aaKnown RBP20.76■□□□□ 0.91
USP11-205ENST00000467378 LMNAP02545 664 aaKnown RBP20.76■□□□□ 0.91
USP11-205ENST00000467378 CXCL8P10145 99 aa20.76■□□□□ 0.91
USP11-205ENST00000467378 POU5F1Q01860 360 aaKnown RBP20.76■□□□□ 0.91
USP11-205ENST00000467378 RNASELQ05823 741 aaKnown RBP20.76■□□□□ 0.91
USP11-205ENST00000467378 DSC1Q08554 894 aa20.76■□□□□ 0.91
USP11-205ENST00000467378 GRIK3Q13003 919 aa20.76■□□□□ 0.91
USP11-205ENST00000467378 SMC1AQ14683 1233 aaKnown RBP20.76■□□□□ 0.91
USP11-205ENST00000467378 ENOX2Q16206 610 aaKnown RBP20.76■□□□□ 0.91
USP11-205ENST00000467378 HS2ST1Q7LGA3 356 aa20.76■□□□□ 0.91
USP11-205ENST00000467378 SAAL1Q96ER3 474 aa20.76■□□□□ 0.91
USP11-205ENST00000467378 ZMAT2Q96NC0 199 aaKnown RBP20.76■□□□□ 0.91
USP11-205ENST00000467378 ZNF558Q96NG5 402 aa20.76■□□□□ 0.91
USP11-205ENST00000467378 RTP3Q9BQQ7 232 aa20.76■□□□□ 0.91
USP11-205ENST00000467378 RPF1Q9H9Y2 349 aaKnown RBP20.76■□□□□ 0.91
USP11-205ENST00000467378 PLEKHA5Q9HAU0 1116 aa20.76■□□□□ 0.91
USP11-205ENST00000467378 HSPBP1Q9NZL4 362 aa20.76■□□□□ 0.91
USP11-205ENST00000467378 CNTN3Q9P232 1028 aa20.76■□□□□ 0.91
USP11-205ENST00000467378 DNAJB4Q9UDY4 337 aa20.76■□□□□ 0.91
USP11-205ENST00000467378 TRAF3IP3Q9Y228 551 aa20.76■□□□□ 0.91
USP11-205ENST00000467378 WDR87Q6ZQQ6 2873 aa20.75■□□□□ 0.91
USP11-205ENST00000467378 BIN1O00499 593 aa20.75■□□□□ 0.91
USP11-205ENST00000467378 THP07101 528 aa20.75■□□□□ 0.91
USP11-205ENST00000467378 KCNE1P15382 129 aa20.75■□□□□ 0.91
USP11-205ENST00000467378 PPM1AP35813 382 aa20.75■□□□□ 0.91
USP11-205ENST00000467378 PBX3P40426 434 aa20.75■□□□□ 0.91
USP11-205ENST00000467378 COLGALT2Q8IYK4 626 aa20.75■□□□□ 0.91
USP11-205ENST00000467378 GPD1LQ8N335 351 aa20.75■□□□□ 0.91
USP11-205ENST00000467378 C12orf76Q8N812 135 aaPredicted RBP20.75■□□□□ 0.91
USP11-205ENST00000467378 TMEM174Q8WUU8 243 aa20.75■□□□□ 0.91
USP11-205ENST00000467378 FAM193BQ96PV7 902 aaPredicted RBP20.75■□□□□ 0.91
USP11-205ENST00000467378 PPP1R10Q96QC0 940 aaKnown RBP20.75■□□□□ 0.91
USP11-205ENST00000467378 HINFPQ9BQA5 517 aa20.75■□□□□ 0.91
USP11-205ENST00000467378 FAM213AQ9BRX8 229 aa20.75■□□□□ 0.91
USP11-205ENST00000467378 DMAC2Q9NW81 257 aa20.75■□□□□ 0.91
USP11-205ENST00000467378 FBXL21Q9UKT6 434 aa20.75■□□□□ 0.91
USP11-205ENST00000467378 GOLGA8IPA6NC78 632 aa20.74■□□□□ 0.91
USP11-205ENST00000467378 GOLGA8JA6NMD2 632 aa20.74■□□□□ 0.91
USP11-205ENST00000467378 LACTBL1A8MY62 500 aa20.74■□□□□ 0.91
USP11-205ENST00000467378 EXTL3O43909 919 aa20.74■□□□□ 0.91
USP11-205ENST00000467378 CLASP2O75122 1294 aaKnown RBP20.74■□□□□ 0.91
USP11-205ENST00000467378 GALTP07902 379 aa20.74■□□□□ 0.91
USP11-205ENST00000467378 NPR3P17342 541 aa20.74■□□□□ 0.91
USP11-205ENST00000467378 BCAR1P56945 870 aa20.74■□□□□ 0.91
USP11-205ENST00000467378 PUM1Q14671 1186 aaKnown RBP eCLIP20.74■□□□□ 0.91
USP11-205ENST00000467378 GLRA4Q5JXX5 417 aa20.74■□□□□ 0.91
USP11-205ENST00000467378 ATAT1Q5SQI0 421 aa20.74■□□□□ 0.91
USP11-205ENST00000467378 KIAA1841Q6NSI8 718 aa20.74■□□□□ 0.91
USP11-205ENST00000467378 TRIML1Q8N9V2 468 aa20.74■□□□□ 0.91
USP11-205ENST00000467378 GOLGA5Q8TBA6 731 aa20.74■□□□□ 0.91
USP11-205ENST00000467378 TMEM175Q9BSA9 504 aa20.74■□□□□ 0.91
USP11-205ENST00000467378 SEMA4AQ9H3S1 761 aa20.74■□□□□ 0.91
USP11-205ENST00000467378 SPG21Q9NZD8 308 aa20.74■□□□□ 0.91
USP11-205ENST00000467378 C2orf71A6NGG8 1288 aa20.73■□□□□ 0.91
USP11-205ENST00000467378 ZC3H11AO75152 810 aaKnown RBP eCLIP20.73■□□□□ 0.91
USP11-205ENST00000467378 CD44P16070 742 aaKnown RBP20.73■□□□□ 0.91
USP11-205ENST00000467378 SLC11A1P49279 550 aa20.73■□□□□ 0.91
USP11-205ENST00000467378 TUSC3Q13454 348 aa20.73■□□□□ 0.91
USP11-205ENST00000467378 SLC9A9Q8IVB4 645 aa20.73■□□□□ 0.91
USP11-205ENST00000467378 CD302Q8IX05 232 aa20.73■□□□□ 0.91
USP11-205ENST00000467378 MRPL43Q8N983 215 aaKnown RBP20.73■□□□□ 0.91
USP11-205ENST00000467378 USTQ9Y2C2 406 aa20.73■□□□□ 0.91
USP11-205ENST00000467378 C2orf16Q68DN1 1984 aa20.72■□□□□ 0.91
USP11-205ENST00000467378 FANCMQ8IYD8 2048 aa20.72■□□□□ 0.91
USP11-205ENST00000467378 PPP1R3GB7ZBB8 358 aa20.72■□□□□ 0.91
USP11-205ENST00000467378 NT5C1B-RDH14C9J2C7 533 aa20.72■□□□□ 0.91
USP11-205ENST00000467378 STK25O00506 426 aa20.72■□□□□ 0.91
USP11-205ENST00000467378 NRP1O14786 923 aa20.72■□□□□ 0.91
USP11-205ENST00000467378 CALUO43852 315 aaPredicted RBP20.72■□□□□ 0.91
USP11-205ENST00000467378 ALDH2P05091 517 aa20.72■□□□□ 0.91
USP11-205ENST00000467378 ALDH7A1P49419 539 aaKnown RBP20.72■□□□□ 0.91
USP11-205ENST00000467378 CYP2J2P51589 502 aa20.72■□□□□ 0.91
USP11-205ENST00000467378 PPP2R3AQ06190 1150 aa20.72■□□□□ 0.91
USP11-205ENST00000467378 ZBTB6Q15916 424 aa20.72■□□□□ 0.91
USP11-205ENST00000467378 NFIL3Q16649 462 aa20.72■□□□□ 0.91
USP11-205ENST00000467378 ZCWPW2Q504Y3 356 aa20.72■□□□□ 0.91
USP11-205ENST00000467378 CENPPQ6IPU0 288 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms