RNA–Protein interactions for RNA: ENST00000465559.5

FDPS-205, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-205ENST00000465559 NRIP1P48552 1158 aa16.8■□□□□ 0.28
FDPS-205ENST00000465559 PMS1P54277 932 aaKnown RBP16.8■□□□□ 0.28
FDPS-205ENST00000465559 MRPL58Q14197 206 aaKnown RBP16.8■□□□□ 0.28
FDPS-205ENST00000465559 FAM171A1Q5VUB5 890 aa16.8■□□□□ 0.28
FDPS-205ENST00000465559 ISM2Q6H9L7 571 aa16.8■□□□□ 0.28
FDPS-205ENST00000465559 WDR49Q8IV35 697 aa16.8■□□□□ 0.28
FDPS-205ENST00000465559 VN1R2Q8NFZ6 395 aa16.8■□□□□ 0.28
FDPS-205ENST00000465559 OR5B17Q8NGF7 314 aa16.8■□□□□ 0.28
FDPS-205ENST00000465559 LNX1Q8TBB1 728 aaPredicted RBP16.8■□□□□ 0.28
FDPS-205ENST00000465559 PARD3BQ8TEW8 1205 aa16.8■□□□□ 0.28
FDPS-205ENST00000465559 PPP2R3CQ969Q6 453 aa16.8■□□□□ 0.28
FDPS-205ENST00000465559 BORCS6Q96GS4 357 aa16.8■□□□□ 0.28
FDPS-205ENST00000465559 DHTKD1Q96HY7 919 aaPredicted RBP16.8■□□□□ 0.28
FDPS-205ENST00000465559 B3GALT6Q96L58 329 aa16.8■□□□□ 0.28
FDPS-205ENST00000465559 KLHL5Q96PQ7 755 aa16.8■□□□□ 0.28
FDPS-205ENST00000465559 TLE6Q9H808 572 aa16.8■□□□□ 0.28
FDPS-205ENST00000465559 MRPL17Q9NRX2 175 aaKnown RBP16.8■□□□□ 0.28
FDPS-205ENST00000465559 FNIP2Q9P278 1114 aa16.8■□□□□ 0.28
FDPS-205ENST00000465559 SIX4Q9UIU6 781 aa16.8■□□□□ 0.28
FDPS-205ENST00000465559 SSX2IPQ9Y2D8 614 aa16.8■□□□□ 0.28
FDPS-205ENST00000465559 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.79■□□□□ 0.28
FDPS-205ENST00000465559 PER2O15055 1255 aa16.79■□□□□ 0.28
FDPS-205ENST00000465559 SPTLC1O15269 473 aa16.79■□□□□ 0.28
FDPS-205ENST00000465559 TRAPPC3O43617 180 aa16.79■□□□□ 0.28
FDPS-205ENST00000465559 TBC1D4O60343 1298 aa16.79■□□□□ 0.28
FDPS-205ENST00000465559 AKAP3O75969 853 aa16.79■□□□□ 0.28
FDPS-205ENST00000465559 URODP06132 367 aa16.79■□□□□ 0.28
FDPS-205ENST00000465559 CNPP09543 421 aaKnown RBP16.79■□□□□ 0.28
FDPS-205ENST00000465559 PAX3P23760 479 aa16.79■□□□□ 0.28
FDPS-205ENST00000465559 NR2F2P24468 414 aa16.79■□□□□ 0.28
FDPS-205ENST00000465559 CCNE1P24864 410 aa16.79■□□□□ 0.28
FDPS-205ENST00000465559 LILRA4P59901 499 aa16.79■□□□□ 0.28
FDPS-205ENST00000465559 ENPEPQ07075 957 aa16.79■□□□□ 0.28
FDPS-205ENST00000465559 BMS1Q14692 1282 aaKnown RBP16.79■□□□□ 0.28
FDPS-205ENST00000465559 ANKRD40Q6AI12 368 aa16.79■□□□□ 0.28
FDPS-205ENST00000465559 RBM43Q6ZSC3 357 aaKnown RBP16.79■□□□□ 0.28
FDPS-205ENST00000465559 RBM23Q86U06 439 aaKnown RBP16.79■□□□□ 0.28
FDPS-205ENST00000465559 SLC22A17Q8WUG5 538 aa16.79■□□□□ 0.28
FDPS-205ENST00000465559 CACTINQ8WUQ7 758 aaKnown RBP16.79■□□□□ 0.28
FDPS-205ENST00000465559 ZNF516Q92618 1163 aa16.79■□□□□ 0.28
FDPS-205ENST00000465559 FAM84AQ96KN4 292 aa16.79■□□□□ 0.28
FDPS-205ENST00000465559 CGRRF1Q99675 332 aa16.79■□□□□ 0.28
FDPS-205ENST00000465559 TTPALQ9BTX7 342 aa16.79■□□□□ 0.28
FDPS-205ENST00000465559 NUP62CLQ9H1M0 184 aa16.79■□□□□ 0.28
FDPS-205ENST00000465559 COG5Q9UP83 839 aa16.79■□□□□ 0.28
FDPS-205ENST00000465559 FSD2A1L4K1 749 aa16.78■□□□□ 0.28
FDPS-205ENST00000465559 I3L4J1 428 aa16.78■□□□□ 0.28
FDPS-205ENST00000465559 BIN1O00499 593 aa16.78■□□□□ 0.28
FDPS-205ENST00000465559 SYN3O14994 580 aa16.78■□□□□ 0.28
FDPS-205ENST00000465559 LINC01565O15544 149 aa16.78■□□□□ 0.28
FDPS-205ENST00000465559 C1RP00736 705 aa16.78■□□□□ 0.28
FDPS-205ENST00000465559 RPL13P26373 211 aaKnown RBP16.78■□□□□ 0.28
FDPS-205ENST00000465559 TKTP29401 623 aaKnown RBP16.78■□□□□ 0.28
FDPS-205ENST00000465559 MCM4P33991 863 aa16.78■□□□□ 0.28
FDPS-205ENST00000465559 TFAMQ00059 246 aaKnown RBP16.78■□□□□ 0.28
FDPS-205ENST00000465559 LRRC63Q05C16 580 aa16.78■□□□□ 0.28
FDPS-205ENST00000465559 ADAM9Q13443 819 aa16.78■□□□□ 0.28
FDPS-205ENST00000465559 DUOXA2Q1HG44 320 aa16.78■□□□□ 0.28
FDPS-205ENST00000465559 C1orf220Q5T0J3 134 aa16.78■□□□□ 0.28
FDPS-205ENST00000465559 TMC2Q8TDI7 906 aa16.78■□□□□ 0.28
FDPS-205ENST00000465559 NOC3LQ8WTT2 800 aaKnown RBP16.78■□□□□ 0.28
FDPS-205ENST00000465559 RIN2Q8WYP3 895 aaPredicted RBP16.78■□□□□ 0.28
FDPS-205ENST00000465559 MKNK1Q9BUB5 465 aa16.78■□□□□ 0.28
FDPS-205ENST00000465559 MTMR12Q9C0I1 747 aa16.78■□□□□ 0.28
FDPS-205ENST00000465559 UBE2ZQ9H832 354 aaPredicted RBP16.78■□□□□ 0.28
FDPS-205ENST00000465559 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.78■□□□□ 0.28
FDPS-205ENST00000465559 ITGA11Q9UKX5 1188 aa16.78■□□□□ 0.28
FDPS-205ENST00000465559 LRRIQ3A6PVS8 624 aaPredicted RBP16.77■□□□□ 0.28
FDPS-205ENST00000465559 TEX28O15482 410 aa16.77■□□□□ 0.28
FDPS-205ENST00000465559 TBX10O75333 385 aa16.77■□□□□ 0.28
FDPS-205ENST00000465559 DLX2Q07687 328 aaPredicted RBP16.77■□□□□ 0.28
FDPS-205ENST00000465559 LMBRD2Q68DH5 695 aaPredicted RBP16.77■□□□□ 0.28
FDPS-205ENST00000465559 TTI2Q6NXR4 508 aa16.77■□□□□ 0.28
FDPS-205ENST00000465559 LILRA6Q6PI73 481 aa16.77■□□□□ 0.28
FDPS-205ENST00000465559 PRSS55Q6UWB4 352 aaPredicted RBP16.77■□□□□ 0.28
FDPS-205ENST00000465559 LRRC52Q8N7C0 313 aa16.77■□□□□ 0.28
FDPS-205ENST00000465559 HLA-CQ95604 372 aa16.77■□□□□ 0.28
FDPS-205ENST00000465559 MSLNLQ96KJ4 702 aa16.77■□□□□ 0.28
FDPS-205ENST00000465559 POP1Q99575 1024 aaKnown RBP16.77■□□□□ 0.28
FDPS-205ENST00000465559 DUSP9Q99956 384 aaKnown RBP16.77■□□□□ 0.28
FDPS-205ENST00000465559 CLSTN3Q9BQT9 956 aa16.77■□□□□ 0.28
FDPS-205ENST00000465559 CLEC1BQ9P126 229 aa16.77■□□□□ 0.28
FDPS-205ENST00000465559 MTRRQ9UBK8 725 aa16.77■□□□□ 0.28
FDPS-205ENST00000465559 PCDHB8Q9UN66 801 aa16.77■□□□□ 0.28
FDPS-205ENST00000465559 NUB1Q9Y5A7 615 aa16.77■□□□□ 0.28
FDPS-205ENST00000465559 BACE2Q9Y5Z0 518 aa16.77■□□□□ 0.28
FDPS-205ENST00000465559 HCFC2Q9Y5Z7 792 aa16.77■□□□□ 0.28
FDPS-205ENST00000465559 TRIM49BA6NDI0 452 aa16.76■□□□□ 0.27
FDPS-205ENST00000465559 C2CD2LO14523 706 aa16.76■□□□□ 0.27
FDPS-205ENST00000465559 PSMA7O14818 248 aa16.76■□□□□ 0.27
FDPS-205ENST00000465559 MBD3O95983 291 aa16.76■□□□□ 0.27
FDPS-205ENST00000465559 ITGB3P05106 788 aa16.76■□□□□ 0.27
FDPS-205ENST00000465559 CYP11A1P05108 521 aa16.76■□□□□ 0.27
FDPS-205ENST00000465559 TMEM191BP0C7N4 346 aa16.76■□□□□ 0.27
FDPS-205ENST00000465559 CLCN4P51793 760 aa16.76■□□□□ 0.27
FDPS-205ENST00000465559 RBM10P98175 930 aaKnown RBP16.76■□□□□ 0.27
FDPS-205ENST00000465559 FKBP3Q00688 224 aaKnown RBP16.76■□□□□ 0.27
FDPS-205ENST00000465559 STIM1Q13586 685 aa16.76■□□□□ 0.27
FDPS-205ENST00000465559 PSMD5Q16401 504 aa16.76■□□□□ 0.27
FDPS-205ENST00000465559 KIAA1841Q6NSI8 718 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms