RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 H7C4K7 107 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 CCL16O15467 120 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 NFICP08651 508 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 POU2F2P09086 479 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 SCN1AP35498 2009 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 ACOT2P49753 483 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 C1QBPQ07021 282 aaKnown RBP11.05□□□□□ -0.64
SF3A3-204ENST00000462258 KCNA1Q09470 495 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 ALCAMQ13740 583 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 TMEM132DQ14C87 1099 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 ZBTB6Q15916 424 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 E2F4Q16254 413 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 CTXN3Q4LDR2 81 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 AXDND1Q5T1B0 1012 aaPredicted RBP11.05□□□□□ -0.64
SF3A3-204ENST00000462258 JADE1Q6IE81 842 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 SLFN12LQ6IEE8 588 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 SHC4Q6S5L8 630 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 BMP8AQ7Z5Y6 402 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 SUGP1Q8IWZ8 645 aaKnown RBP11.05□□□□□ -0.64
SF3A3-204ENST00000462258 CD302Q8IX05 232 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 APPL2Q8NEU8 664 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 BEST2Q8NFU1 509 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 POMGNT1Q8WZA1 660 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 PBXIP1Q96AQ6 731 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 DHX58Q96C10 678 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 ASIC4Q96FT7 647 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 MFSD14AQ96MC6 490 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 ACCSQ96QU6 501 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 MYADMQ96S97 322 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 TSPAN18Q96SJ8 248 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 STRA6Q9BX79 667 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 FGFBP2Q9BYJ0 223 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 CUEDC2Q9H467 287 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 PANK4Q9NVE7 773 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 LIMD1Q9UGP4 676 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 AGO2Q9UKV8 859 aaKnown RBP11.05□□□□□ -0.64
SF3A3-204ENST00000462258 PCDHB8Q9UN66 801 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 POLIQ9UNA4 740 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 STYXL1Q9Y6J8 313 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 ZDBF2Q9HCK1 2354 aa11.05□□□□□ -0.64
SF3A3-204ENST00000462258 NOTCH4Q99466 2003 aa11.04□□□□□ -0.64
SF3A3-204ENST00000462258 PPEF2O14830 753 aa11.04□□□□□ -0.64
SF3A3-204ENST00000462258 TBC1D4O60343 1298 aa11.04□□□□□ -0.64
SF3A3-204ENST00000462258 XYLBO75191 536 aa11.04□□□□□ -0.64
SF3A3-204ENST00000462258 ADRB2P07550 413 aa11.04□□□□□ -0.64
SF3A3-204ENST00000462258 FSHRP23945 695 aa11.04□□□□□ -0.64
SF3A3-204ENST00000462258 ADSSP30520 456 aa11.04□□□□□ -0.64
SF3A3-204ENST00000462258 PLA2G5P39877 138 aa11.04□□□□□ -0.64
SF3A3-204ENST00000462258 ME1P48163 572 aa11.04□□□□□ -0.64
SF3A3-204ENST00000462258 AARSP49588 968 aaKnown RBP eCLIP11.04□□□□□ -0.64
SF3A3-204ENST00000462258 ARPP19P56211 112 aa11.04□□□□□ -0.64
SF3A3-204ENST00000462258 SPATA1Q5VX52 437 aa11.04□□□□□ -0.64
SF3A3-204ENST00000462258 ATL3Q6DD88 541 aa11.04□□□□□ -0.64
SF3A3-204ENST00000462258 GRASPQ7Z6J2 395 aaPredicted RBP11.04□□□□□ -0.64
SF3A3-204ENST00000462258 CCDC65Q8IXS2 484 aa11.04□□□□□ -0.64
SF3A3-204ENST00000462258 FBXL6Q8N531 539 aa11.04□□□□□ -0.64
SF3A3-204ENST00000462258 TRIM9Q9C026 710 aa11.04□□□□□ -0.64
SF3A3-204ENST00000462258 LRRC27Q9C0I9 530 aa11.04□□□□□ -0.64
SF3A3-204ENST00000462258 MAGEF1Q9HAY2 307 aa11.04□□□□□ -0.64
SF3A3-204ENST00000462258 KBTBD4Q9NVX7 518 aa11.04□□□□□ -0.64
SF3A3-204ENST00000462258 EPS15L1Q9UBC2 864 aa11.04□□□□□ -0.64
SF3A3-204ENST00000462258 FBXL5Q9UKA1 691 aa11.04□□□□□ -0.64
SF3A3-204ENST00000462258 DUSP12Q9UNI6 340 aa11.04□□□□□ -0.64
SF3A3-204ENST00000462258 DERAQ9Y315 318 aa11.04□□□□□ -0.64
SF3A3-204ENST00000462258 C2CD2Q9Y426 696 aa11.04□□□□□ -0.64
SF3A3-204ENST00000462258 ARIH1Q9Y4X5 557 aaPredicted RBP11.04□□□□□ -0.64
SF3A3-204ENST00000462258 PCDHB13Q9Y5F0 798 aa11.04□□□□□ -0.64
SF3A3-204ENST00000462258 WDFY4Q6ZS81 3184 aa11.04□□□□□ -0.64
SF3A3-204ENST00000462258 M0QZQ0 153 aa11.03□□□□□ -0.64
SF3A3-204ENST00000462258 CPB1P15086 417 aa11.03□□□□□ -0.64
SF3A3-204ENST00000462258 ASIC1P78348 528 aa11.03□□□□□ -0.64
SF3A3-204ENST00000462258 NTHL1P78549 312 aa11.03□□□□□ -0.64
SF3A3-204ENST00000462258 YWHAHQ04917 246 aaPredicted RBP11.03□□□□□ -0.64
SF3A3-204ENST00000462258 DNM1Q05193 864 aaKnown RBP11.03□□□□□ -0.64
SF3A3-204ENST00000462258 TDGQ13569 410 aa11.03□□□□□ -0.64
SF3A3-204ENST00000462258 MRPL58Q14197 206 aaKnown RBP11.03□□□□□ -0.64
SF3A3-204ENST00000462258 POSTNQ15063 836 aa11.03□□□□□ -0.64
SF3A3-204ENST00000462258 UVSSAQ2YD98 709 aa11.03□□□□□ -0.64
SF3A3-204ENST00000462258 DSTYKQ6XUX3 929 aa11.03□□□□□ -0.64
SF3A3-204ENST00000462258 RTL10Q7L3V2 364 aa11.03□□□□□ -0.64
SF3A3-204ENST00000462258 SYCP3Q8IZU3 236 aa11.03□□□□□ -0.64
SF3A3-204ENST00000462258 IQUBQ8NA54 791 aa11.03□□□□□ -0.64
SF3A3-204ENST00000462258 ZNF461Q8TAF7 563 aa11.03□□□□□ -0.64
SF3A3-204ENST00000462258 SAAL1Q96ER3 474 aa11.03□□□□□ -0.64
SF3A3-204ENST00000462258 ASB7Q9H672 318 aa11.03□□□□□ -0.64
SF3A3-204ENST00000462258 KCNK12Q9HB15 430 aa11.03□□□□□ -0.64
SF3A3-204ENST00000462258 FAM13BQ9NYF5 915 aa11.03□□□□□ -0.64
SF3A3-204ENST00000462258 IGSF9Q9P2J2 1179 aa11.03□□□□□ -0.64
SF3A3-204ENST00000462258 CFAP45Q9UL16 551 aa11.03□□□□□ -0.64
SF3A3-204ENST00000462258 PRRG1O14668 218 aa11.02□□□□□ -0.65
SF3A3-204ENST00000462258 POLR2DO15514 142 aaKnown RBP11.02□□□□□ -0.65
SF3A3-204ENST00000462258 PRPF6O94906 941 aaKnown RBP11.02□□□□□ -0.65
SF3A3-204ENST00000462258 ABLIM3O94929 683 aa11.02□□□□□ -0.65
SF3A3-204ENST00000462258 IL18RAPO95256 599 aa11.02□□□□□ -0.65
SF3A3-204ENST00000462258 PDGFBP01127 241 aaPredicted RBP11.02□□□□□ -0.65
SF3A3-204ENST00000462258 LRG1P02750 347 aa11.02□□□□□ -0.65
SF3A3-204ENST00000462258 ODC1P11926 461 aa11.02□□□□□ -0.65
SF3A3-204ENST00000462258 ATF2P15336 505 aa11.02□□□□□ -0.65
SF3A3-204ENST00000462258 GARTP22102 1010 aa11.02□□□□□ -0.65
SF3A3-204ENST00000462258 ELF1P32519 619 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms