RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 EFEMP2O95967 443 aa10.93□□□□□ -0.66
RFX3-210ENST00000457373 NFICP08651 508 aa10.93□□□□□ -0.66
RFX3-210ENST00000457373 CYP3A5P20815 502 aa10.93□□□□□ -0.66
RFX3-210ENST00000457373 KCNA5P22460 613 aa10.93□□□□□ -0.66
RFX3-210ENST00000457373 RPL9P32969 192 aaKnown RBP10.93□□□□□ -0.66
RFX3-210ENST00000457373 NDUFV1P49821 464 aa10.93□□□□□ -0.66
RFX3-210ENST00000457373 WNT7BP56706 349 aa10.93□□□□□ -0.66
RFX3-210ENST00000457373 PRSS12P56730 875 aa10.93□□□□□ -0.66
RFX3-210ENST00000457373 SNRPFP62306 86 aaKnown RBP10.93□□□□□ -0.66
RFX3-210ENST00000457373 RBM10P98175 930 aaKnown RBP10.93□□□□□ -0.66
RFX3-210ENST00000457373 TFF2Q03403 129 aa10.93□□□□□ -0.66
RFX3-210ENST00000457373 PTPN14Q15678 1187 aa10.93□□□□□ -0.66
RFX3-210ENST00000457373 ZBTB6Q15916 424 aa10.93□□□□□ -0.66
RFX3-210ENST00000457373 DUSP6Q16828 381 aa10.93□□□□□ -0.66
RFX3-210ENST00000457373 KIAA0319Q5VV43 1072 aa10.93□□□□□ -0.66
RFX3-210ENST00000457373 SPATA1Q5VX52 437 aa10.93□□□□□ -0.66
RFX3-210ENST00000457373 CBWD2Q8IUF1 395 aa10.93□□□□□ -0.66
RFX3-210ENST00000457373 GLYCTKQ8IVS8 523 aa10.93□□□□□ -0.66
RFX3-210ENST00000457373 BRSK2Q8IWQ3 736 aa10.93□□□□□ -0.66
RFX3-210ENST00000457373 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.93□□□□□ -0.66
RFX3-210ENST00000457373 RNF168Q8IYW5 571 aaPredicted RBP10.93□□□□□ -0.66
RFX3-210ENST00000457373 EFHBQ8N7U6 833 aa10.93□□□□□ -0.66
RFX3-210ENST00000457373 XXYLT1Q8NBI6 393 aa10.93□□□□□ -0.66
RFX3-210ENST00000457373 RIN2Q8WYP3 895 aaPredicted RBP10.93□□□□□ -0.66
RFX3-210ENST00000457373 EMILIN2Q9BXX0 1053 aa10.93□□□□□ -0.66
RFX3-210ENST00000457373 PDE11AQ9HCR9 933 aa10.93□□□□□ -0.66
RFX3-210ENST00000457373 RMND1Q9NWS8 449 aa10.93□□□□□ -0.66
RFX3-210ENST00000457373 SSX2IPQ9Y2D8 614 aa10.93□□□□□ -0.66
RFX3-210ENST00000457373 SZT2Q5T011 3432 aa10.93□□□□□ -0.66
RFX3-210ENST00000457373 VWA8A3KMH1 1905 aa10.93□□□□□ -0.66
RFX3-210ENST00000457373 H3BQ06 376 aaPredicted RBP10.92□□□□□ -0.66
RFX3-210ENST00000457373 TMEM189-UBE2V1I3L0A0 370 aa10.92□□□□□ -0.66
RFX3-210ENST00000457373 TRAPPC3O43617 180 aa10.92□□□□□ -0.66
RFX3-210ENST00000457373 CALUO43852 315 aaPredicted RBP10.92□□□□□ -0.66
RFX3-210ENST00000457373 EXOC3O60645 756 aa10.92□□□□□ -0.66
RFX3-210ENST00000457373 LILRB3O75022 631 aa10.92□□□□□ -0.66
RFX3-210ENST00000457373 RPL17P18621 184 aaKnown RBP10.92□□□□□ -0.66
RFX3-210ENST00000457373 KLRC2P26717 231 aa10.92□□□□□ -0.66
RFX3-210ENST00000457373 LRPAP1P30533 357 aa10.92□□□□□ -0.66
RFX3-210ENST00000457373 MCM4P33991 863 aa10.92□□□□□ -0.66
RFX3-210ENST00000457373 TFAMQ00059 246 aaKnown RBP10.92□□□□□ -0.66
RFX3-210ENST00000457373 POU5F1Q01860 360 aaKnown RBP10.92□□□□□ -0.66
RFX3-210ENST00000457373 DSG1Q02413 1049 aa10.92□□□□□ -0.66
RFX3-210ENST00000457373 DLX2Q07687 328 aaPredicted RBP10.92□□□□□ -0.66
RFX3-210ENST00000457373 ELAVL2Q12926 359 aaKnown RBP10.92□□□□□ -0.66
RFX3-210ENST00000457373 CLUL1Q15846 466 aa10.92□□□□□ -0.66
RFX3-210ENST00000457373 RTP2Q5QGT7 225 aa10.92□□□□□ -0.66
RFX3-210ENST00000457373 LMBRD2Q68DH5 695 aaPredicted RBP10.92□□□□□ -0.66
RFX3-210ENST00000457373 PRSS55Q6UWB4 352 aaPredicted RBP10.92□□□□□ -0.66
RFX3-210ENST00000457373 EFCAB13Q8IY85 973 aa10.92□□□□□ -0.66
RFX3-210ENST00000457373 SMYD4Q8IYR2 804 aaPredicted RBP10.92□□□□□ -0.66
RFX3-210ENST00000457373 ZNF454Q8N9F8 522 aa10.92□□□□□ -0.66
RFX3-210ENST00000457373 GBP4Q96PP9 640 aa10.92□□□□□ -0.66
RFX3-210ENST00000457373 GSDMAQ96QA5 445 aa10.92□□□□□ -0.66
RFX3-210ENST00000457373 TSPAN18Q96SJ8 248 aa10.92□□□□□ -0.66
RFX3-210ENST00000457373 CDCA3Q99618 268 aaPredicted RBP10.92□□□□□ -0.66
RFX3-210ENST00000457373 TTPALQ9BTX7 342 aa10.92□□□□□ -0.66
RFX3-210ENST00000457373 ADAM33Q9BZ11 813 aa10.92□□□□□ -0.66
RFX3-210ENST00000457373 KCTD10Q9H3F6 313 aa10.92□□□□□ -0.66
RFX3-210ENST00000457373 KIAA1586Q9HCI6 787 aa10.92□□□□□ -0.66
RFX3-210ENST00000457373 CHST7Q9NS84 486 aa10.92□□□□□ -0.66
RFX3-210ENST00000457373 CGNQ9P2M7 1197 aaKnown RBP10.92□□□□□ -0.66
RFX3-210ENST00000457373 DERAQ9Y315 318 aa10.92□□□□□ -0.66
RFX3-210ENST00000457373 IRAK3Q9Y616 596 aa10.92□□□□□ -0.66
RFX3-210ENST00000457373 TCF20Q9UGU0 1960 aaKnown RBP10.91□□□□□ -0.66
RFX3-210ENST00000457373 PDXKO00764 312 aa10.91□□□□□ -0.66
RFX3-210ENST00000457373 PPEF2O14830 753 aa10.91□□□□□ -0.66
RFX3-210ENST00000457373 GLP2RO95838 553 aa10.91□□□□□ -0.66
RFX3-210ENST00000457373 CNPP09543 421 aaKnown RBP10.91□□□□□ -0.66
RFX3-210ENST00000457373 TMEM191BP0C7N4 346 aa10.91□□□□□ -0.66
RFX3-210ENST00000457373 TKTP29401 623 aaKnown RBP10.91□□□□□ -0.66
RFX3-210ENST00000457373 LTBRP36941 435 aa10.91□□□□□ -0.66
RFX3-210ENST00000457373 MRPS5P82675 430 aaKnown RBP10.91□□□□□ -0.66
RFX3-210ENST00000457373 SURF1Q15526 300 aa10.91□□□□□ -0.66
RFX3-210ENST00000457373 CAMK4Q16566 473 aa10.91□□□□□ -0.66
RFX3-210ENST00000457373 CTC1Q2NKJ3 1217 aa10.91□□□□□ -0.66
RFX3-210ENST00000457373 TUSC1Q2TAM9 212 aa10.91□□□□□ -0.66
RFX3-210ENST00000457373 ZNF658Q5TYW1 1059 aaPredicted RBP10.91□□□□□ -0.66
RFX3-210ENST00000457373 DSTYKQ6XUX3 929 aa10.91□□□□□ -0.66
RFX3-210ENST00000457373 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.91□□□□□ -0.66
RFX3-210ENST00000457373 CLEC17AQ6ZS10 378 aa10.91□□□□□ -0.66
RFX3-210ENST00000457373 PALB2Q86YC2 1186 aa10.91□□□□□ -0.66
RFX3-210ENST00000457373 NT5DC4Q86YG4 428 aa10.91□□□□□ -0.66
RFX3-210ENST00000457373 ELOA2Q8IYF1 753 aaPredicted RBP10.91□□□□□ -0.66
RFX3-210ENST00000457373 GUF1Q8N442 669 aaKnown RBP10.91□□□□□ -0.66
RFX3-210ENST00000457373 VN1R2Q8NFZ6 395 aa10.91□□□□□ -0.66
RFX3-210ENST00000457373 GOLGA5Q8TBA6 731 aa10.91□□□□□ -0.66
RFX3-210ENST00000457373 CACTINQ8WUQ7 758 aaKnown RBP10.91□□□□□ -0.66
RFX3-210ENST00000457373 ATXN2LQ8WWM7 1075 aaKnown RBP10.91□□□□□ -0.66
RFX3-210ENST00000457373 FAM84AQ96KN4 292 aa10.91□□□□□ -0.66
RFX3-210ENST00000457373 RXFP1Q9HBX9 757 aa10.91□□□□□ -0.66
RFX3-210ENST00000457373 DPP3Q9NY33 737 aa10.91□□□□□ -0.66
RFX3-210ENST00000457373 BARX2Q9UMQ3 279 aaPredicted RBP10.91□□□□□ -0.66
RFX3-210ENST00000457373 C2CD2Q9Y426 696 aa10.91□□□□□ -0.66
RFX3-210ENST00000457373 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.91□□□□□ -0.66
RFX3-210ENST00000457373 PLXNA3P51805 1871 aa10.91□□□□□ -0.66
RFX3-210ENST00000457373 BIN1O00499 593 aa10.9□□□□□ -0.66
RFX3-210ENST00000457373 SPTLC1O15269 473 aa10.9□□□□□ -0.66
RFX3-210ENST00000457373 TEX28O15482 410 aa10.9□□□□□ -0.66
RFX3-210ENST00000457373 TBX10O75333 385 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms