RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 PCDHGA9Q9Y5G4 932 aaKnown RBP8.36□□□□□ -1.07
BRCC3-208ENST00000453705 PCDHGA8Q9Y5G5 932 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 PCDHGA7Q9Y5G6 932 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 PCDHGA6Q9Y5G7 932 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 PCDHGA3Q9Y5H0 932 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 PCDHGA2Q9Y5H1 932 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 UBXN8O00124 270 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 USO1O60763 962 aaKnown RBP8.36□□□□□ -1.07
BRCC3-208ENST00000453705 HARSP12081 509 aaKnown RBP8.36□□□□□ -1.07
BRCC3-208ENST00000453705 GAP43P17677 238 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 HOXA7P31268 230 aaPredicted RBP8.36□□□□□ -1.07
BRCC3-208ENST00000453705 CYP2C19P33261 490 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 SMTNP53814 917 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 EFR3AQ14156 821 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 GRIN2CQ14957 1233 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 TAF12Q16514 161 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 CCDC122Q5T0U0 273 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 METTL11BQ5VVY1 283 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 CREG2Q8IUH2 290 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 CCDC33Q8N5R6 958 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 PIBF1Q8WXW3 757 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 FERMT2Q96AC1 680 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 SHISA4Q96DD7 197 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 THOC1Q96FV9 657 aaKnown RBP8.36□□□□□ -1.07
BRCC3-208ENST00000453705 SPTLC3Q9NUV7 552 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 HOOK1Q9UJC3 728 aaKnown RBP8.36□□□□□ -1.07
BRCC3-208ENST00000453705 C19orf53Q9UNZ5 99 aaPredicted RBP8.36□□□□□ -1.07
BRCC3-208ENST00000453705 SRPRBQ9Y5M8 271 aaKnown RBP8.36□□□□□ -1.07
BRCC3-208ENST00000453705 CLIC4Q9Y696 253 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 K7EPI3 171 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 SRGAP2O75044 1071 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 KRT2P35908 639 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 PIK3CBP42338 1070 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 GIPRP48546 466 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 CDK8P49336 464 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 TOB1P50616 345 aaPredicted RBP8.36□□□□□ -1.07
BRCC3-208ENST00000453705 CLUL1Q15846 466 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 MAP3K21Q5TCX8 1036 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 FKBP1CQ5VVH2 108 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 XKR5Q6UX68 686 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 FGD2Q7Z6J4 655 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 PTRH1Q86Y79 214 aaKnown RBP8.36□□□□□ -1.07
BRCC3-208ENST00000453705 ETFBKMTQ8IXQ9 262 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 DIS3L2Q8IYB7 885 aaKnown RBP8.36□□□□□ -1.07
BRCC3-208ENST00000453705 CERS5Q8N5B7 392 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 TMCO5AQ8N6Q1 288 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 TTLL6Q8N841 843 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 ZBTB8BQ8NAP8 495 aaPredicted RBP8.36□□□□□ -1.07
BRCC3-208ENST00000453705 CCDC17Q96LX7 622 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 TMEM74Q96NL1 305 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 TSEN34Q9BSV6 310 aaKnown RBP8.36□□□□□ -1.07
BRCC3-208ENST00000453705 RUSC1Q9BVN2 902 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 LGR4Q9BXB1 951 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 ZC3H12CQ9C0D7 883 aaKnown RBP8.36□□□□□ -1.07
BRCC3-208ENST00000453705 MAD2L2Q9UI95 211 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 BOLA1Q9Y3E2 137 aa8.36□□□□□ -1.07
BRCC3-208ENST00000453705 A8MVJ9 347 aa8.35□□□□□ -1.07
BRCC3-208ENST00000453705 OPA1O60313 960 aa8.35□□□□□ -1.07
BRCC3-208ENST00000453705 TBCAO75347 108 aaKnown RBP8.35□□□□□ -1.07
BRCC3-208ENST00000453705 ENTPD3O75355 529 aa8.35□□□□□ -1.07
BRCC3-208ENST00000453705 CYP2D6P10635 497 aa8.35□□□□□ -1.07
BRCC3-208ENST00000453705 SCG2P13521 617 aa8.35□□□□□ -1.07
BRCC3-208ENST00000453705 NR2C2P49116 596 aa8.35□□□□□ -1.07
BRCC3-208ENST00000453705 IQCB1Q15051 598 aa8.35□□□□□ -1.07
BRCC3-208ENST00000453705 CCDC85BQ15834 202 aaPredicted RBP8.35□□□□□ -1.07
BRCC3-208ENST00000453705 ARL6IP4Q66PJ3 421 aaKnown RBP8.35□□□□□ -1.07
BRCC3-208ENST00000453705 FCHSD1Q86WN1 690 aa8.35□□□□□ -1.07
BRCC3-208ENST00000453705 SRBD1Q8N5C6 995 aaKnown RBP8.35□□□□□ -1.07
BRCC3-208ENST00000453705 AADATQ8N5Z0 425 aa8.35□□□□□ -1.07
BRCC3-208ENST00000453705 FSIP1Q8NA03 581 aa8.35□□□□□ -1.07
BRCC3-208ENST00000453705 CTNNBL1Q8WYA6 563 aaPredicted RBP8.35□□□□□ -1.07
BRCC3-208ENST00000453705 PHKBQ93100 1093 aa8.35□□□□□ -1.07
BRCC3-208ENST00000453705 GAS2L1Q99501 681 aaPredicted RBP8.35□□□□□ -1.07
BRCC3-208ENST00000453705 UNC93B1Q9H1C4 597 aa8.35□□□□□ -1.07
BRCC3-208ENST00000453705 CERS4Q9HA82 394 aa8.35□□□□□ -1.07
BRCC3-208ENST00000453705 BRMS1Q9HCU9 246 aa8.35□□□□□ -1.07
BRCC3-208ENST00000453705 NPHS2Q9NP85 383 aa8.35□□□□□ -1.07
BRCC3-208ENST00000453705 ANO10Q9NW15 660 aa8.35□□□□□ -1.07
BRCC3-208ENST00000453705 CPSF2Q9P2I0 782 aaKnown RBP8.35□□□□□ -1.07
BRCC3-208ENST00000453705 LRCH1Q9Y2L9 728 aa8.35□□□□□ -1.07
BRCC3-208ENST00000453705 ZFP37Q9Y6Q3 630 aaPredicted RBP8.35□□□□□ -1.07
BRCC3-208ENST00000453705 LOC285556D6RIA3 1793 aa8.35□□□□□ -1.07
BRCC3-208ENST00000453705 LOXHD1Q8IVV2 1947 aa8.35□□□□□ -1.07
BRCC3-208ENST00000453705 PSDA5PKW4 1024 aaPredicted RBP8.35□□□□□ -1.07
BRCC3-208ENST00000453705 LAD1O00515 517 aa8.35□□□□□ -1.07
BRCC3-208ENST00000453705 DDX3XO00571 662 aaKnown RBP eCLIP8.35□□□□□ -1.073e-7■■■■□ 19.9
BRCC3-208ENST00000453705 ADAMTS4O75173 837 aa8.35□□□□□ -1.07
BRCC3-208ENST00000453705 RARGP13631 454 aa8.35□□□□□ -1.07
BRCC3-208ENST00000453705 DPEP1P16444 411 aa8.35□□□□□ -1.07
BRCC3-208ENST00000453705 TNFSF4P23510 183 aa8.35□□□□□ -1.07
BRCC3-208ENST00000453705 TKTL1P51854 596 aa8.35□□□□□ -1.07
BRCC3-208ENST00000453705 INAQ16352 499 aa8.35□□□□□ -1.07
BRCC3-208ENST00000453705 RGS9BPQ6ZS82 235 aa8.35□□□□□ -1.07
BRCC3-208ENST00000453705 USP51Q70EK9 711 aa8.35□□□□□ -1.07
BRCC3-208ENST00000453705 RNF168Q8IYW5 571 aaPredicted RBP8.35□□□□□ -1.07
BRCC3-208ENST00000453705 HSPBAP1Q96EW2 488 aa8.35□□□□□ -1.07
BRCC3-208ENST00000453705 NT5C1AQ9BXI3 368 aa8.35□□□□□ -1.07
BRCC3-208ENST00000453705 RIOX1Q9H6W3 641 aa8.35□□□□□ -1.07
BRCC3-208ENST00000453705 KAT14Q9H8E8 782 aa8.35□□□□□ -1.07
BRCC3-208ENST00000453705 FAM8A1Q9UBU6 413 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms