RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 WDHD1O75717 1129 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 MTA2O94776 668 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 PRAMEF1O95521 474 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 EOMESO95936 686 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 THBDP07204 575 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 POLR2EP19388 210 aaKnown RBP3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 RXRAP19793 462 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 BTF3P20290 206 aaKnown RBP3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 CALB2P22676 271 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 SFPQP23246 707 aaKnown RBP eCLIP3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 CTSKP43235 329 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 PREPP48147 710 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 LSSP48449 732 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 CLK1P49759 484 aaKnown RBP3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 TUBP50607 506 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 MECP2P51608 486 aaKnown RBP3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 IL2P60568 153 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 ERVK-21P61565 698 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 POU4F1Q01851 419 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 FAPQ12884 760 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 MSLNQ13421 630 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 ITGA7Q13683 1181 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 NONOQ15233 471 aaKnown RBP eCLIP3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 SAFBQ15424 915 aaKnown RBP eCLIP3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 SHROOM1Q2M3G4 852 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 GFOD2Q3B7J2 385 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 ALDH1L2Q3SY69 923 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 PDCD4Q53EL6 469 aaKnown RBP3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 GLE1Q53GS7 698 aaKnown RBP3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 COBLL1Q53SF7 1204 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 DEPDC1Q5TB30 811 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 IQSEC1Q6DN90 963 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 NAA16Q6N069 864 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 NEK10Q6ZWH5 1172 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 KRT77Q7Z794 578 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 MTDHQ86UE4 582 aaKnown RBP3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 NLRP14Q86W24 1093 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 RAB11FIP4Q86YS3 637 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 PPIL6Q8IXY8 311 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 CLASRPQ8N2M8 674 aaKnown RBP3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 TTC30BQ8N4P2 665 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 MREGQ8N565 214 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 ENDOVQ8N8Q3 282 aaKnown RBP3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 SCAIQ8N9R8 606 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 TRIML1Q8N9V2 468 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 MLKLQ8NB16 471 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 NOA1Q8NC60 698 aaKnown RBP3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 PCDH19Q8TAB3 1148 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 UHMK1Q8TAS1 419 aaKnown RBP3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 AGAP11Q8TF27 550 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 SNF8Q96H20 258 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 RPGRIP1Q96KN7 1286 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 Q96M66 194 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 GDAP1L1Q96MZ0 367 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 NR1H4Q96RI1 486 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 TUBGCP5Q96RT8 1024 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 PLEKHF1Q96S99 279 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 CCT8L2Q96SF2 557 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 PHF20Q9BVI0 1012 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 ZNF700Q9H0M5 742 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 SIL1Q9H173 461 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 PARVGQ9HBI0 331 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 TCF7L1Q9HCS4 588 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 GPRC5CQ9NQ84 441 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 TCF7L2Q9NQB0 619 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 GPR27Q9NS67 375 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 FAIMQ9NVQ4 179 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 C6orf203Q9P0P8 240 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 B4GALT6Q9UBX8 382 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 ZNHIT2Q9UHR6 403 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 TMEFF2Q9UIK5 374 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 MINPP1Q9UNW1 487 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 RPL26L1Q9UNX3 145 aaKnown RBP3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 R3HDM2Q9Y2K5 976 aaKnown RBP3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 FAM32AQ9Y421 112 aaKnown RBP3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 DAGLAQ9Y4D2 1042 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 PCDHGB3Q9Y5G1 929 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 SNX9Q9Y5X1 595 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 ZNF518AQ6AHZ1 1483 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 NEDD4P46934 1319 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 WDR17Q8IZU2 1322 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 SALL3Q9BXA9 1300 aa3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 ARHGEF28Q8N1W1 1705 aaKnown RBP3.9□□□□□ -1.79
HMGB3P8-201ENST00000449709 MYH13Q9UKX3 1938 aa3.89□□□□□ -1.79
HMGB3P8-201ENST00000449709 UNC13BO14795 1591 aa3.89□□□□□ -1.79
HMGB3P8-201ENST00000449709 LOC105371267A0A1B0GV96 52 aa3.89□□□□□ -1.79
HMGB3P8-201ENST00000449709 C2orf71A6NGG8 1288 aa3.89□□□□□ -1.79
HMGB3P8-201ENST00000449709 WDR64B1ANS9 1081 aa3.89□□□□□ -1.79
HMGB3P8-201ENST00000449709 IFIT3O14879 490 aaKnown RBP3.89□□□□□ -1.79
HMGB3P8-201ENST00000449709 DYNC1LI2O43237 492 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P8-201ENST00000449709 SGTAO43765 313 aa3.89□□□□□ -1.79
HMGB3P8-201ENST00000449709 SH3BP5O60239 455 aa3.89□□□□□ -1.79
HMGB3P8-201ENST00000449709 GAS7O60861 476 aa3.89□□□□□ -1.79
HMGB3P8-201ENST00000449709 EIF2S1P05198 315 aaKnown RBP3.89□□□□□ -1.79
HMGB3P8-201ENST00000449709 GSNP06396 782 aa3.89□□□□□ -1.79
HMGB3P8-201ENST00000449709 ITGA2BP08514 1039 aa3.89□□□□□ -1.79
HMGB3P8-201ENST00000449709 NFICP08651 508 aa3.89□□□□□ -1.79
HMGB3P8-201ENST00000449709 IFIT2P09913 472 aaKnown RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms