RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 NT5C1B-RDH14C9J2C7 533 aa4.67□□□□□ -1.66
TRAPPC13-204ENST00000438419 FAM227AF5H4B4 570 aa4.67□□□□□ -1.66
TRAPPC13-204ENST00000438419 F2RL2O00254 374 aa4.67□□□□□ -1.66
TRAPPC13-204ENST00000438419 KIF3BO15066 747 aa4.67□□□□□ -1.66
TRAPPC13-204ENST00000438419 B3GALT2O43825 422 aa4.67□□□□□ -1.66
TRAPPC13-204ENST00000438419 UBXN7O94888 489 aa4.67□□□□□ -1.66
TRAPPC13-204ENST00000438419 PEX11BO96011 259 aa4.67□□□□□ -1.66
TRAPPC13-204ENST00000438419 GNAI3P08754 354 aa4.67□□□□□ -1.66
TRAPPC13-204ENST00000438419 SPATA31D3P0C874 917 aa4.67□□□□□ -1.66
TRAPPC13-204ENST00000438419 HTR1BP28222 390 aa4.67□□□□□ -1.66
TRAPPC13-204ENST00000438419 ACVRL1P37023 503 aa4.67□□□□□ -1.66
TRAPPC13-204ENST00000438419 RNASE9P60153 205 aaKnown RBP4.67□□□□□ -1.66
TRAPPC13-204ENST00000438419 GNAI1P63096 354 aa4.67□□□□□ -1.66
TRAPPC13-204ENST00000438419 GBX1Q14549 363 aa4.67□□□□□ -1.66
TRAPPC13-204ENST00000438419 FLYWCH1Q4VC44 716 aa4.67□□□□□ -1.66
TRAPPC13-204ENST00000438419 SPATA31D4Q6ZUB0 917 aa4.67□□□□□ -1.66
TRAPPC13-204ENST00000438419 DAAM2Q86T65 1068 aa4.67□□□□□ -1.66
TRAPPC13-204ENST00000438419 ZNF276Q8N554 614 aa4.67□□□□□ -1.66
TRAPPC13-204ENST00000438419 FITM2Q8N6M3 262 aa4.67□□□□□ -1.66
TRAPPC13-204ENST00000438419 KLHDC4Q8TBB5 520 aa4.67□□□□□ -1.66
TRAPPC13-204ENST00000438419 SCAND2PQ9GZW5 306 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC13-204ENST00000438419 PNPOQ9NVS9 261 aa4.67□□□□□ -1.66
TRAPPC13-204ENST00000438419 GEMIN8Q9NWZ8 242 aaKnown RBP4.67□□□□□ -1.66
TRAPPC13-204ENST00000438419 JKAMPQ9P055 326 aa4.67□□□□□ -1.66
TRAPPC13-204ENST00000438419 GABBR1Q9UBS5 961 aa4.67□□□□□ -1.66
TRAPPC13-204ENST00000438419 CDHR4A6H8M9 788 aa4.66□□□□□ -1.66
TRAPPC13-204ENST00000438419 H3BUI4 141 aa4.66□□□□□ -1.66
TRAPPC13-204ENST00000438419 SLC43A1O75387 559 aa4.66□□□□□ -1.66
TRAPPC13-204ENST00000438419 TUSC2O75896 110 aa4.66□□□□□ -1.66
TRAPPC13-204ENST00000438419 PRSS23O95084 383 aa4.66□□□□□ -1.66
TRAPPC13-204ENST00000438419 ANXA1P04083 346 aa4.66□□□□□ -1.66
TRAPPC13-204ENST00000438419 ITGB1P05556 798 aa4.66□□□□□ -1.66
TRAPPC13-204ENST00000438419 SLC6A2P23975 617 aa4.66□□□□□ -1.66
TRAPPC13-204ENST00000438419 PRDX5P30044 214 aa4.66□□□□□ -1.66
TRAPPC13-204ENST00000438419 PIK3CGP48736 1102 aa4.66□□□□□ -1.66
TRAPPC13-204ENST00000438419 NKX6-1P78426 367 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC13-204ENST00000438419 PDCD4Q53EL6 469 aaKnown RBP4.66□□□□□ -1.66
TRAPPC13-204ENST00000438419 ZNF365Q70YC5 407 aa4.66□□□□□ -1.66
TRAPPC13-204ENST00000438419 MED25Q71SY5 747 aa4.66□□□□□ -1.66
TRAPPC13-204ENST00000438419 RHOUQ7L0Q8 258 aa4.66□□□□□ -1.66
TRAPPC13-204ENST00000438419 OVCH2Q7RTZ1 564 aa4.66□□□□□ -1.66
TRAPPC13-204ENST00000438419 GDF7Q7Z4P5 450 aa4.66□□□□□ -1.66
TRAPPC13-204ENST00000438419 ZFPM1Q8IX07 1006 aa4.66□□□□□ -1.66
TRAPPC13-204ENST00000438419 RHOT2Q8IXI1 618 aa4.66□□□□□ -1.66
TRAPPC13-204ENST00000438419 PPP1R35Q8TAP8 253 aa4.66□□□□□ -1.66
TRAPPC13-204ENST00000438419 BRIX1Q8TDN6 353 aaKnown RBP4.66□□□□□ -1.66
TRAPPC13-204ENST00000438419 SLC25A43Q8WUT9 341 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC13-204ENST00000438419 SLC35A4Q96G79 324 aa4.66□□□□□ -1.66
TRAPPC13-204ENST00000438419 PHACTR3Q96KR7 559 aa4.66□□□□□ -1.66
TRAPPC13-204ENST00000438419 TMEM60Q9H2L4 133 aa4.66□□□□□ -1.66
TRAPPC13-204ENST00000438419 GSTO2Q9H4Y5 243 aa4.66□□□□□ -1.66
TRAPPC13-204ENST00000438419 MMRN2Q9H8L6 949 aa4.66□□□□□ -1.66
TRAPPC13-204ENST00000438419 RLIMQ9NVW2 624 aa4.66□□□□□ -1.66
TRAPPC13-204ENST00000438419 OBP2AQ9NY56 170 aa4.66□□□□□ -1.66
TRAPPC13-204ENST00000438419 TRPM5Q9NZQ8 1165 aa4.66□□□□□ -1.66
TRAPPC13-204ENST00000438419 CFAP97Q9P2B7 532 aa4.66□□□□□ -1.66
TRAPPC13-204ENST00000438419 HS3ST3A1Q9Y663 406 aa4.66□□□□□ -1.66
TRAPPC13-204ENST00000438419 A0A088AWK7 358 aa4.65□□□□□ -1.66
TRAPPC13-204ENST00000438419 CCDC78A2IDD5 438 aa4.65□□□□□ -1.66
TRAPPC13-204ENST00000438419 FZD7O75084 574 aa4.65□□□□□ -1.66
TRAPPC13-204ENST00000438419 RPS6KA4O75676 772 aa4.65□□□□□ -1.66
TRAPPC13-204ENST00000438419 ZNF202O95125 648 aa4.65□□□□□ -1.66
TRAPPC13-204ENST00000438419 FSHBP01225 129 aa4.65□□□□□ -1.66
TRAPPC13-204ENST00000438419 SBK3P0C264 359 aa4.65□□□□□ -1.66
TRAPPC13-204ENST00000438419 GCSHP23434 173 aa4.65□□□□□ -1.66
TRAPPC13-204ENST00000438419 SLC6A4P31645 630 aa4.65□□□□□ -1.66
TRAPPC13-204ENST00000438419 AGFG1P52594 562 aaKnown RBP4.65□□□□□ -1.66
TRAPPC13-204ENST00000438419 HMGA2P52926 109 aa4.65□□□□□ -1.66
TRAPPC13-204ENST00000438419 RAB1AP62820 205 aa4.65□□□□□ -1.66
TRAPPC13-204ENST00000438419 PLS1Q14651 629 aa4.65□□□□□ -1.66
TRAPPC13-204ENST00000438419 ANO6Q4KMQ2 910 aa4.65□□□□□ -1.66
TRAPPC13-204ENST00000438419 CCDC93Q567U6 631 aa4.65□□□□□ -1.66
TRAPPC13-204ENST00000438419 AGAP9Q5VTM2 703 aa4.65□□□□□ -1.66
TRAPPC13-204ENST00000438419 SRGAP1Q7Z6B7 1085 aa4.65□□□□□ -1.66
TRAPPC13-204ENST00000438419 DGKHQ86XP1 1220 aa4.65□□□□□ -1.66
TRAPPC13-204ENST00000438419 FAM90A1Q86YD7 464 aa4.65□□□□□ -1.66
TRAPPC13-204ENST00000438419 PDSS2Q86YH6 399 aa4.65□□□□□ -1.66
TRAPPC13-204ENST00000438419 NUP133Q8WUM0 1156 aa4.65□□□□□ -1.66
TRAPPC13-204ENST00000438419 LRFN3Q9BTN0 628 aa4.65□□□□□ -1.66
TRAPPC13-204ENST00000438419 SLC46A2Q9BY10 475 aa4.65□□□□□ -1.66
TRAPPC13-204ENST00000438419 B3GNT5Q9BYG0 378 aa4.65□□□□□ -1.66
TRAPPC13-204ENST00000438419 BRD9Q9H8M2 597 aa4.65□□□□□ -1.66
TRAPPC13-204ENST00000438419 DKK2Q9UBU2 259 aa4.65□□□□□ -1.66
TRAPPC13-204ENST00000438419 ZDHHC8Q9ULC8 765 aa4.65□□□□□ -1.66
TRAPPC13-204ENST00000438419 ATP11BQ9Y2G3 1177 aa4.65□□□□□ -1.66
TRAPPC13-204ENST00000438419 GAGE12BA1L429 117 aa4.64□□□□□ -1.67
TRAPPC13-204ENST00000438419 GAGE12HA6NDE8 117 aa4.64□□□□□ -1.67
TRAPPC13-204ENST00000438419 CAPN8A6NHC0 703 aa4.64□□□□□ -1.67
TRAPPC13-204ENST00000438419 NCR1O76036 304 aa4.64□□□□□ -1.67
TRAPPC13-204ENST00000438419 CKBP12277 381 aa4.64□□□□□ -1.67
TRAPPC13-204ENST00000438419 GPSM2P81274 684 aa4.64□□□□□ -1.67
TRAPPC13-204ENST00000438419 FGL2Q14314 439 aa4.64□□□□□ -1.67
TRAPPC13-204ENST00000438419 HLTFQ14527 1009 aaKnown RBP eCLIP4.64□□□□□ -1.67
TRAPPC13-204ENST00000438419 LRRC55Q6ZSA7 311 aa4.64□□□□□ -1.67
TRAPPC13-204ENST00000438419 MRGPREQ86SM8 312 aa4.64□□□□□ -1.67
TRAPPC13-204ENST00000438419 SH2D3CQ8N5H7 860 aa4.64□□□□□ -1.67
TRAPPC13-204ENST00000438419 SLC16A11Q8NCK7 471 aa4.64□□□□□ -1.67
TRAPPC13-204ENST00000438419 TBC1D15Q8TC07 691 aa4.64□□□□□ -1.67
TRAPPC13-204ENST00000438419 ZNF483Q8TF39 744 aaPredicted RBP4.64□□□□□ -1.67
TRAPPC13-204ENST00000438419 LENG9Q96B70 501 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms