RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 ST6GALNAC4Q9H4F1 302 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 TMEM206Q9H813 350 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 UBE2ZQ9H832 354 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 RPF1Q9H9Y2 349 aaKnown RBP6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 NGRNQ9NPE2 291 aaKnown RBP6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 MRPL17Q9NRX2 175 aaKnown RBP6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 CHMP5Q9NZZ3 219 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 CPSF3Q9UKF6 684 aaKnown RBP6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 ADAM28Q9UKQ2 775 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 BARX2Q9UMQ3 279 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 COG5Q9UP83 839 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 MAPK8IP1Q9UQF2 711 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 LZTS1Q9Y250 596 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 ANK1P16157 1881 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 PDCD11Q14690 1871 aaKnown RBP6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 PVALEFA0A1B0GWK0 134 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 KLRC4O43908 158 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 CLASP2O75122 1294 aaKnown RBP6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 PRPF40AO75400 957 aaKnown RBP6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 KIF4AO95239 1232 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 PIGRP01833 764 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 SOD2P04179 222 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 RPN1P04843 607 aaKnown RBP6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 CTSAP10619 480 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 BMP1P13497 986 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 IL9P15248 144 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 EPCAMP16422 314 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 SCP2P22307 547 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 ADSSP30520 456 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 ABCD1P33897 745 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 HOXD13P35453 343 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 GLUD2P49448 558 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 PPP2R3AQ06190 1150 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 STK4Q13043 487 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 PNOCQ13519 176 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 POSTNQ15063 836 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 ENOX2Q16206 610 aaKnown RBP6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 UPP1Q16831 310 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 AAK1Q2M2I8 961 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 XKR4Q5GH76 650 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 FAM26FQ5R3K3 315 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 KIAA0319Q5VV43 1072 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 PTCRAQ6ISU1 281 aaPredicted RBP6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 PDE12Q6L8Q7 609 aaKnown RBP6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 ARMCX5Q6P1M9 558 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 FUT10Q6P4F1 479 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 CRELD2Q6UXH1 353 aaPredicted RBP6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 STXBP4Q6ZWJ1 553 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 EFHBQ8N7U6 833 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 C12orf76Q8N812 135 aaPredicted RBP6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 C3orf58Q8NDZ4 430 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 VN1R2Q8NFZ6 395 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 RSPH1Q8WYR4 309 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 HVCN1Q96D96 273 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 SNX27Q96L92 541 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 NECAB3Q96P71 396 aaPredicted RBP6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 CBWD1Q9BRT8 395 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 MAGEF1Q9HAY2 307 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 OLFML3Q9NRN5 406 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 CLEC1BQ9P126 229 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 TUBGCP4Q9UGJ1 667 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 USP25Q9UHP3 1055 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 NUB1Q9Y5A7 615 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 STYXL1Q9Y6J8 313 aa6.27□□□□□ -1.41
HMGB3P24-201ENST00000433260 PLXNA3P51805 1871 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 FAM237AA0A1B0GTK4 181 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 TTC26A0AVF1 554 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 DLL1O00548 723 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 PODXLO00592 558 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 TGFB1I1O43294 461 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 NCK2O43639 380 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 FAM189A1O60320 539 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 TBX10O75333 385 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 GLP2RO95838 553 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 S1PR4O95977 384 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 LDHAP00338 332 aaKnown RBP6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 URODP06132 367 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 NFICP08651 508 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 CNPP09543 421 aaKnown RBP6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 WEE2P0C1S8 567 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 KCNE1P15382 129 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 MCM4P33991 863 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 CYP2J2P51589 502 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 CDR1P51861 262 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 ARPP19P56211 112 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 WNT7BP56706 349 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 DPYDQ12882 1025 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 PSMD2Q13200 908 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 SNW1Q13573 536 aaKnown RBP6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 PTPN14Q15678 1187 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 KYAT1Q16773 422 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 CTC1Q2NKJ3 1217 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 USP41Q3LFD5 358 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 LEXMQ3ZCV2 418 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 RTP2Q5QGT7 225 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 SCARA3Q6AZY7 606 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 JADE1Q6IE81 842 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 ANKRD54Q6NXT1 300 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 CD300LGQ6UXG3 332 aa6.26□□□□□ -1.41
HMGB3P24-201ENST00000433260 DSTYKQ6XUX3 929 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms