RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 ZC3H7BQ9UGR2 993 aaKnown RBP4.4□□□□□ -1.71
CNGA1-203ENST00000420489 AKAP2Q9Y2D5 859 aa4.4□□□□□ -1.71
CNGA1-203ENST00000420489 ITPR1Q14643 2758 aa4.39□□□□□ -1.71
CNGA1-203ENST00000420489 SERPINF2P08697 491 aa4.39□□□□□ -1.71
CNGA1-203ENST00000420489 ITGB5P18084 799 aa4.39□□□□□ -1.71
CNGA1-203ENST00000420489 CASP7P55210 303 aa4.39□□□□□ -1.71
CNGA1-203ENST00000420489 NAXDQ8IW45 347 aa4.39□□□□□ -1.71
CNGA1-203ENST00000420489 RFFLQ8WZ73 363 aa4.39□□□□□ -1.71
CNGA1-203ENST00000420489 TCF25Q9BQ70 676 aa4.39□□□□□ -1.71
CNGA1-203ENST00000420489 PLEKHA4Q9H4M7 779 aa4.39□□□□□ -1.71
CNGA1-203ENST00000420489 SPG21Q9NZD8 308 aa4.39□□□□□ -1.71
CNGA1-203ENST00000420489 TJP2Q9UDY2 1190 aa4.39□□□□□ -1.71
CNGA1-203ENST00000420489 HLA-DOAP06340 250 aa4.39□□□□□ -1.71
CNGA1-203ENST00000420489 HNRNPA1P09651 372 aaKnown RBP eCLIP4.39□□□□□ -1.71
CNGA1-203ENST00000420489 SARSP49591 514 aaKnown RBP4.39□□□□□ -1.71
CNGA1-203ENST00000420489 TLE1Q04724 770 aa4.39□□□□□ -1.71
CNGA1-203ENST00000420489 IFIT5Q13325 482 aaKnown RBP4.39□□□□□ -1.71
CNGA1-203ENST00000420489 TSSK4Q6SA08 328 aa4.39□□□□□ -1.71
CNGA1-203ENST00000420489 RBM23Q86U06 439 aaKnown RBP4.39□□□□□ -1.71
CNGA1-203ENST00000420489 SYT12Q8IV01 421 aa4.39□□□□□ -1.71
CNGA1-203ENST00000420489 ABI1Q8IZP0 508 aa4.39□□□□□ -1.71
CNGA1-203ENST00000420489 CABP5Q9NP86 173 aa4.39□□□□□ -1.71
CNGA1-203ENST00000420489 ENTPD7Q9NQZ7 604 aa4.39□□□□□ -1.71
CNGA1-203ENST00000420489 DISC1Q9NRI5 854 aa4.39□□□□□ -1.71
CNGA1-203ENST00000420489 GEMIN8Q9NWZ8 242 aaKnown RBP4.39□□□□□ -1.71
CNGA1-203ENST00000420489 ARHGEF17Q96PE2 2063 aaPredicted RBP4.39□□□□□ -1.71
CNGA1-203ENST00000420489 TTC3P53804 2025 aa4.39□□□□□ -1.71
CNGA1-203ENST00000420489 VWA5AO00534 786 aa4.38□□□□□ -1.71
CNGA1-203ENST00000420489 FANCGO15287 622 aa4.38□□□□□ -1.71
CNGA1-203ENST00000420489 FRAT2O75474 233 aaPredicted RBP4.38□□□□□ -1.71
CNGA1-203ENST00000420489 ANXA1P04083 346 aa4.38□□□□□ -1.71
CNGA1-203ENST00000420489 CTSAP10619 480 aa4.38□□□□□ -1.71
CNGA1-203ENST00000420489 SLC6A4P31645 630 aa4.38□□□□□ -1.71
CNGA1-203ENST00000420489 LPAL2Q16609 132 aa4.38□□□□□ -1.71
CNGA1-203ENST00000420489 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.38□□□□□ -1.71
CNGA1-203ENST00000420489 DDX53Q86TM3 631 aaKnown RBP4.38□□□□□ -1.71
CNGA1-203ENST00000420489 VPS37DQ86XT2 251 aa4.38□□□□□ -1.71
CNGA1-203ENST00000420489 OR6J1Q8NGC5 347 aa4.38□□□□□ -1.71
CNGA1-203ENST00000420489 ZNF507Q8TCN5 953 aa4.38□□□□□ -1.71
CNGA1-203ENST00000420489 DEPDC1BQ8WUY9 529 aa4.38□□□□□ -1.71
CNGA1-203ENST00000420489 CCDC120Q96HB5 630 aa4.38□□□□□ -1.71
CNGA1-203ENST00000420489 KRTAP4-12Q9BQ66 201 aa4.38□□□□□ -1.71
CNGA1-203ENST00000420489 ZBP1Q9H171 429 aa4.38□□□□□ -1.71
CNGA1-203ENST00000420489 LMAN1LQ9HAT1 526 aa4.38□□□□□ -1.71
CNGA1-203ENST00000420489 DDX4Q9NQI0 724 aaKnown RBP4.38□□□□□ -1.71
CNGA1-203ENST00000420489 FAM8A1Q9UBU6 413 aa4.38□□□□□ -1.71
CNGA1-203ENST00000420489 MTF2Q9Y483 593 aaPredicted RBP4.38□□□□□ -1.71
CNGA1-203ENST00000420489 EP300Q09472 2414 aaPredicted RBP4.38□□□□□ -1.71
CNGA1-203ENST00000420489 KRTAP9-6A0A140TA67 174 aa4.38□□□□□ -1.71
CNGA1-203ENST00000420489 FAM87AP0C7U9 286 aa4.38□□□□□ -1.71
CNGA1-203ENST00000420489 CCDC192P0DO97 292 aa4.38□□□□□ -1.71
CNGA1-203ENST00000420489 CASTP20810 708 aaKnown RBP4.38□□□□□ -1.71
CNGA1-203ENST00000420489 MORC3Q14149 939 aa4.38□□□□□ -1.71
CNGA1-203ENST00000420489 INAVAQ3KP66 663 aa4.38□□□□□ -1.71
CNGA1-203ENST00000420489 ZC3H12AQ5D1E8 599 aaKnown RBP4.38□□□□□ -1.71
CNGA1-203ENST00000420489 FAM47CQ5HY64 1035 aa4.38□□□□□ -1.71
CNGA1-203ENST00000420489 ZNF765Q7L2R6 523 aa4.38□□□□□ -1.71
CNGA1-203ENST00000420489 ERICH1Q86X53 443 aa4.38□□□□□ -1.71
CNGA1-203ENST00000420489 COX4I2Q96KJ9 171 aa4.38□□□□□ -1.71
CNGA1-203ENST00000420489 GAD1Q99259 594 aa4.38□□□□□ -1.71
CNGA1-203ENST00000420489 ADAMTS10Q9H324 1103 aa4.38□□□□□ -1.71
CNGA1-203ENST00000420489 MYH16Q9H6N6 1097 aa4.38□□□□□ -1.71
CNGA1-203ENST00000420489 CAPN10Q9HC96 672 aa4.38□□□□□ -1.71
CNGA1-203ENST00000420489 ADD3Q9UEY8 706 aaKnown RBP4.38□□□□□ -1.71
CNGA1-203ENST00000420489 NFE2L3Q9Y4A8 694 aa4.38□□□□□ -1.71
CNGA1-203ENST00000420489 NUMBLQ9Y6R0 609 aa4.38□□□□□ -1.71
CNGA1-203ENST00000420489 C2orf16Q68DN1 1984 aa4.38□□□□□ -1.71
CNGA1-203ENST00000420489 ESYT2A0FGR8 921 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 DENND3A2RUS2 1198 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 TPD52L2O43399 206 aaKnown RBP4.37□□□□□ -1.71
CNGA1-203ENST00000420489 PEX10O60683 326 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 F2P00734 622 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 PTMAP06454 111 aaKnown RBP4.37□□□□□ -1.71
CNGA1-203ENST00000420489 GBP2P32456 591 aaPredicted RBP4.37□□□□□ -1.71
CNGA1-203ENST00000420489 TTC39AQ5SRH9 613 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 LLGL2Q6P1M3 1020 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 CCDC144CPQ8IYA2 1237 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 ARL14EPQ8N8R7 260 aaPredicted RBP4.37□□□□□ -1.71
CNGA1-203ENST00000420489 HRASLS5Q96KN8 279 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 ZNF558Q96NG5 402 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 PHF20Q9BVI0 1012 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 NCANO14594 1321 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 CFAP47Q6ZTR5 3102 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 FAM171A2A8MVW0 826 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.37□□□□□ -1.71
CNGA1-203ENST00000420489 FLRT2O43155 660 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 LRRN2O75325 713 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 C4BPAP04003 597 aaKnown RBP4.37□□□□□ -1.71
CNGA1-203ENST00000420489 PGK2P07205 417 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 FGFR2P21802 821 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 YBX1P67809 324 aaKnown RBP4.37□□□□□ -1.71
CNGA1-203ENST00000420489 NCAPHQ15003 741 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 ZXDCQ2QGD7 858 aaPredicted RBP4.37□□□□□ -1.71
CNGA1-203ENST00000420489 GLIPR1L2Q4G1C9 344 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 IL27RAQ6UWB1 636 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 CHMP4BQ9H444 224 aaKnown RBP4.37□□□□□ -1.71
CNGA1-203ENST00000420489 GDE1Q9NZC3 331 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 PNMA8BQ9ULN7 279 aaPredicted RBP4.37□□□□□ -1.71
CNGA1-203ENST00000420489 NUDCQ9Y266 331 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 TMX2Q9Y320 296 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms