RNA–Protein interactions for RNA: ENST00000419582.5

PTPA-213, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-213ENST00000419582 DDX25Q9UHL0 483 aaKnown RBP16.66■□□□□ 0.26
PTPA-213ENST00000419582 PCDHA4Q9UN74 947 aa16.66■□□□□ 0.26
PTPA-213ENST00000419582 KALRNO60229 2985 aa16.66■□□□□ 0.26
PTPA-213ENST00000419582 LNP1A1A4G5 178 aa16.65■□□□□ 0.26
PTPA-213ENST00000419582 PCNX2A6NKB5 2137 aa16.65■□□□□ 0.26
PTPA-213ENST00000419582 CDX4O14627 284 aaPredicted RBP16.65■□□□□ 0.26
PTPA-213ENST00000419582 SYN3O14994 580 aa16.65■□□□□ 0.26
PTPA-213ENST00000419582 RECQL4O94761 1208 aa16.65■□□□□ 0.26
PTPA-213ENST00000419582 HMGB1P09429 215 aaKnown RBP16.65■□□□□ 0.26
PTPA-213ENST00000419582 IGFBP6P24592 240 aaPredicted RBP16.65■□□□□ 0.26
PTPA-213ENST00000419582 SOX9P48436 509 aa16.65■□□□□ 0.26
PTPA-213ENST00000419582 ELF2Q15723 593 aa16.65■□□□□ 0.26
PTPA-213ENST00000419582 PPP4R3AQ6IN85 833 aa16.65■□□□□ 0.26
PTPA-213ENST00000419582 TCEAL6Q6IPX3 200 aa16.65■□□□□ 0.26
PTPA-213ENST00000419582 HS6ST3Q8IZP7 471 aa16.65■□□□□ 0.26
PTPA-213ENST00000419582 FBXL16Q8N461 479 aa16.65■□□□□ 0.26
PTPA-213ENST00000419582 FAM200AQ8TCP9 573 aa16.65■□□□□ 0.26
PTPA-213ENST00000419582 TCEAL3Q969E4 200 aa16.65■□□□□ 0.26
PTPA-213ENST00000419582 CXCL16Q9H2A7 254 aa16.65■□□□□ 0.26
PTPA-213ENST00000419582 ASAH2Q9NR71 780 aa16.65■□□□□ 0.26
PTPA-213ENST00000419582 ANKEF1Q9NU02 776 aa16.65■□□□□ 0.26
PTPA-213ENST00000419582 H7C4K7 107 aa16.64■□□□□ 0.25
PTPA-213ENST00000419582 N4BP3O15049 544 aa16.64■□□□□ 0.25
PTPA-213ENST00000419582 ZBTB39O15060 712 aa16.64■□□□□ 0.25
PTPA-213ENST00000419582 IFNAR1P17181 557 aa16.64■□□□□ 0.25
PTPA-213ENST00000419582 CLCNKBP51801 687 aa16.64■□□□□ 0.25
PTPA-213ENST00000419582 NLRP5P59047 1200 aa16.64■□□□□ 0.25
PTPA-213ENST00000419582 PLCB2Q00722 1185 aa16.64■□□□□ 0.25
PTPA-213ENST00000419582 KARSQ15046 597 aaKnown RBP16.64■□□□□ 0.25
PTPA-213ENST00000419582 PON2Q15165 354 aa16.64■□□□□ 0.25
PTPA-213ENST00000419582 GALNT17Q6IS24 598 aa16.64■□□□□ 0.25
PTPA-213ENST00000419582 HAUS6Q7Z4H7 955 aa16.64■□□□□ 0.25
PTPA-213ENST00000419582 DAGLBQ8NCG7 672 aa16.64■□□□□ 0.25
PTPA-213ENST00000419582 TCEANC2Q96MN5 208 aa16.64■□□□□ 0.25
PTPA-213ENST00000419582 TMEM209Q96SK2 561 aa16.64■□□□□ 0.25
PTPA-213ENST00000419582 ESYT1Q9BSJ8 1104 aa16.64■□□□□ 0.25
PTPA-213ENST00000419582 LRRC3Q9BY71 257 aa16.64■□□□□ 0.25
PTPA-213ENST00000419582 TMEM9BQ9NQ34 198 aa16.64■□□□□ 0.25
PTPA-213ENST00000419582 BMP2KQ9NSY1 1161 aaPredicted RBP16.64■□□□□ 0.25
PTPA-213ENST00000419582 RGL1Q9NZL6 768 aa16.64■□□□□ 0.25
PTPA-213ENST00000419582 VPS54Q9P1Q0 977 aa16.64■□□□□ 0.25
PTPA-213ENST00000419582 EBF1Q9UH73 591 aa16.64■□□□□ 0.25
PTPA-213ENST00000419582 AFF4Q9UHB7 1163 aaKnown RBP16.64■□□□□ 0.25
PTPA-213ENST00000419582 TPCN1Q9ULQ1 816 aa16.64■□□□□ 0.25
PTPA-213ENST00000419582 SLC8A2Q9UPR5 921 aa16.64■□□□□ 0.25
PTPA-213ENST00000419582 GPSM3Q9Y4H4 160 aa16.64■□□□□ 0.25
PTPA-213ENST00000419582 SLC37A4O43826 429 aa16.63■□□□□ 0.25
PTPA-213ENST00000419582 SLITRK3O94933 977 aa16.63■□□□□ 0.25
PTPA-213ENST00000419582 PTPAQ15257 358 aa16.63■□□□□ 0.25
PTPA-213ENST00000419582 TMEM196Q5HYL7 178 aa16.63■□□□□ 0.25
PTPA-213ENST00000419582 CDCA2Q69YH5 1023 aaPredicted RBP16.63■□□□□ 0.25
PTPA-213ENST00000419582 PROSER1Q86XN7 944 aa16.63■□□□□ 0.25
PTPA-213ENST00000419582 SHKBP1Q8TBC3 707 aa16.63■□□□□ 0.25
PTPA-213ENST00000419582 LRRC3BQ96PB8 259 aa16.63■□□□□ 0.25
PTPA-213ENST00000419582 SLKQ9H2G2 1235 aaPredicted RBP16.63■□□□□ 0.25
PTPA-213ENST00000419582 PDZD7Q9H5P4 517 aa16.63■□□□□ 0.25
PTPA-213ENST00000419582 GTSE1Q9NYZ3 720 aa16.63■□□□□ 0.25
PTPA-213ENST00000419582 ANKFY1Q9P2R3 1169 aa16.63■□□□□ 0.25
PTPA-213ENST00000419582 UPK3BL1B0FP48 263 aa16.62■□□□□ 0.25
PTPA-213ENST00000419582 UPK3BL2E5RIL1 263 aa16.62■□□□□ 0.25
PTPA-213ENST00000419582 XRCC6P12956 609 aaKnown RBP eCLIP16.62■□□□□ 0.25
PTPA-213ENST00000419582 GCFC2P16383 781 aaKnown RBP16.62■□□□□ 0.25
PTPA-213ENST00000419582 PXNP49023 591 aaPredicted RBP16.62■□□□□ 0.25
PTPA-213ENST00000419582 KRT32Q14532 448 aa16.62■□□□□ 0.25
PTPA-213ENST00000419582 TEAD2Q15562 447 aa16.62■□□□□ 0.25
PTPA-213ENST00000419582 PKN3Q6P5Z2 889 aa16.62■□□□□ 0.25
PTPA-213ENST00000419582 C11orf74Q86VG3 221 aa16.62■□□□□ 0.25
PTPA-213ENST00000419582 ARID3BQ8IVW6 561 aaPredicted RBP16.62■□□□□ 0.25
PTPA-213ENST00000419582 BLIDQ8IZY5 108 aa16.62■□□□□ 0.25
PTPA-213ENST00000419582 C3orf58Q8NDZ4 430 aa16.62■□□□□ 0.25
PTPA-213ENST00000419582 BEST2Q8NFU1 509 aa16.62■□□□□ 0.25
PTPA-213ENST00000419582 HAS1Q92839 578 aa16.62■□□□□ 0.25
PTPA-213ENST00000419582 HSD17B14Q9BPX1 270 aa16.62■□□□□ 0.25
PTPA-213ENST00000419582 FBXL5Q9UKA1 691 aa16.62■□□□□ 0.25
PTPA-213ENST00000419582 NAV2Q8IVL1 2488 aa16.62■□□□□ 0.25
PTPA-213ENST00000419582 CACNA1EQ15878 2313 aa16.62■□□□□ 0.25
PTPA-213ENST00000419582 H0Y626 953 aa16.61■□□□□ 0.25
PTPA-213ENST00000419582 TRDMT1O14717 391 aaKnown RBP16.61■□□□□ 0.25
PTPA-213ENST00000419582 KHNYNO15037 678 aaKnown RBP16.61■□□□□ 0.25
PTPA-213ENST00000419582 TRIM16O95361 564 aa16.61■□□□□ 0.25
PTPA-213ENST00000419582 MYL4P12829 197 aa16.61■□□□□ 0.25
PTPA-213ENST00000419582 CREB5Q02930 508 aa16.61■□□□□ 0.25
PTPA-213ENST00000419582 NPY5RQ15761 445 aa16.61■□□□□ 0.25
PTPA-213ENST00000419582 XKR4Q5GH76 650 aa16.61■□□□□ 0.25
PTPA-213ENST00000419582 DYDC2Q96IM9 177 aa16.61■□□□□ 0.25
PTPA-213ENST00000419582 ADPGKQ9BRR6 497 aa16.61■□□□□ 0.25
PTPA-213ENST00000419582 MKNK1Q9BUB5 465 aa16.61■□□□□ 0.25
PTPA-213ENST00000419582 PDCD11Q14690 1871 aaKnown RBP16.61■□□□□ 0.25
PTPA-213ENST00000419582 ACKR2O00590 384 aa16.6■□□□□ 0.25
PTPA-213ENST00000419582 GJA1P17302 382 aa16.6■□□□□ 0.25
PTPA-213ENST00000419582 BRCC3P46736 316 aa16.6■□□□□ 0.25
PTPA-213ENST00000419582 CACNB1Q02641 598 aaPredicted RBP16.6■□□□□ 0.25
PTPA-213ENST00000419582 TWF1Q12792 350 aa16.6■□□□□ 0.25
PTPA-213ENST00000419582 GRSF1Q12849 480 aaKnown RBP eCLIP16.6■□□□□ 0.25
PTPA-213ENST00000419582 ITPRIPL2Q3MIP1 535 aa16.6■□□□□ 0.25
PTPA-213ENST00000419582 ADCK5Q3MIX3 580 aa16.6■□□□□ 0.25
PTPA-213ENST00000419582 TMC8Q8IU68 726 aa16.6■□□□□ 0.25
PTPA-213ENST00000419582 NOSTRINQ8IVI9 506 aa16.6■□□□□ 0.25
PTPA-213ENST00000419582 C2orf40Q9H1Z8 148 aa16.6■□□□□ 0.25
PTPA-213ENST00000419582 SLITRK6Q9H5Y7 841 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms