RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 PRKCBP05771 671 aa16.21■□□□□ 0.19
SCAMP4-202ENST00000409472 KCNJ1P48048 391 aa16.21■□□□□ 0.19
SCAMP4-202ENST00000409472 CDCA2Q69YH5 1023 aaPredicted RBP16.21■□□□□ 0.19
SCAMP4-202ENST00000409472 MON1BQ7L1V2 547 aa16.21■□□□□ 0.19
SCAMP4-202ENST00000409472 ACO2Q99798 780 aaKnown RBP16.21■□□□□ 0.19
SCAMP4-202ENST00000409472 WNT8AQ9H1J5 351 aa16.21■□□□□ 0.19
SCAMP4-202ENST00000409472 SNX24Q9Y343 169 aa16.21■□□□□ 0.19
SCAMP4-202ENST00000409472 UTP11Q9Y3A2 253 aaKnown RBP16.21■□□□□ 0.19
SCAMP4-202ENST00000409472 PCDHA3Q9Y5H8 950 aa16.21■□□□□ 0.19
SCAMP4-202ENST00000409472 NFS1Q9Y697 457 aa16.21■□□□□ 0.19
SCAMP4-202ENST00000409472 GOLGA6L10A0A0M3HER8 536 aa16.2■□□□□ 0.18
SCAMP4-202ENST00000409472 LGR5O75473 907 aa16.2■□□□□ 0.18
SCAMP4-202ENST00000409472 IQCF3P0C7M6 154 aa16.2■□□□□ 0.18
SCAMP4-202ENST00000409472 RARAP10276 462 aa16.2■□□□□ 0.18
SCAMP4-202ENST00000409472 CTNNA2P26232 953 aa16.2■□□□□ 0.18
SCAMP4-202ENST00000409472 GNA15P30679 374 aa16.2■□□□□ 0.18
SCAMP4-202ENST00000409472 ATP1A2P50993 1020 aa16.2■□□□□ 0.18
SCAMP4-202ENST00000409472 CENPCQ03188 943 aa16.2■□□□□ 0.18
SCAMP4-202ENST00000409472 PPFIA1Q13136 1202 aa16.2■□□□□ 0.18
SCAMP4-202ENST00000409472 CEP85LQ5SZL2 805 aa16.2■□□□□ 0.18
SCAMP4-202ENST00000409472 EEF1DP3Q658K8 133 aa16.2■□□□□ 0.18
SCAMP4-202ENST00000409472 DUPD1Q68J44 220 aa16.2■□□□□ 0.18
SCAMP4-202ENST00000409472 ZDHHC24Q6UX98 284 aa16.2■□□□□ 0.18
SCAMP4-202ENST00000409472 EGFL6Q8IUX8 553 aa16.2■□□□□ 0.18
SCAMP4-202ENST00000409472 TMEM192Q8IY95 271 aa16.2■□□□□ 0.18
SCAMP4-202ENST00000409472 SPON1Q9HCB6 807 aa16.2■□□□□ 0.18
SCAMP4-202ENST00000409472 ZDHHC18Q9NUE0 388 aa16.2■□□□□ 0.18
SCAMP4-202ENST00000409472 GRIN2DO15399 1336 aa16.2■□□□□ 0.18
SCAMP4-202ENST00000409472 SLC25A27O95847 323 aa16.2■□□□□ 0.18
SCAMP4-202ENST00000409472 CD58P19256 250 aa16.2■□□□□ 0.18
SCAMP4-202ENST00000409472 SCP2P22307 547 aa16.2■□□□□ 0.18
SCAMP4-202ENST00000409472 MAPK4P31152 587 aa16.2■□□□□ 0.18
SCAMP4-202ENST00000409472 MYL6P60660 151 aa16.2■□□□□ 0.18
SCAMP4-202ENST00000409472 NOMO3P69849 1222 aa16.2■□□□□ 0.18
SCAMP4-202ENST00000409472 SEL1L2Q5TEA6 688 aa16.2■□□□□ 0.18
SCAMP4-202ENST00000409472 SLC13A5Q86YT5 568 aaPredicted RBP16.2■□□□□ 0.18
SCAMP4-202ENST00000409472 ERP44Q9BS26 406 aa16.2■□□□□ 0.18
SCAMP4-202ENST00000409472 PTPN22Q9Y2R2 807 aa16.2■□□□□ 0.18
SCAMP4-202ENST00000409472 IGKV6-21A0A0C4DH24 114 aa16.19■□□□□ 0.18
SCAMP4-202ENST00000409472 KIAA0391O15091 583 aaKnown RBP16.19■□□□□ 0.18
SCAMP4-202ENST00000409472 TOM1L1O75674 476 aa16.19■□□□□ 0.18
SCAMP4-202ENST00000409472 TXNP10599 105 aaKnown RBP16.19■□□□□ 0.18
SCAMP4-202ENST00000409472 ABCD1P33897 745 aa16.19■□□□□ 0.18
SCAMP4-202ENST00000409472 EPHX2P34913 555 aa16.19■□□□□ 0.18
SCAMP4-202ENST00000409472 NSFP46459 744 aaKnown RBP16.19■□□□□ 0.18
SCAMP4-202ENST00000409472 ZNF844Q08AG5 666 aa16.19■□□□□ 0.18
SCAMP4-202ENST00000409472 MKRN3Q13064 507 aaKnown RBP16.19■□□□□ 0.18
SCAMP4-202ENST00000409472 ZNF394Q53GI3 561 aa16.19■□□□□ 0.18
SCAMP4-202ENST00000409472 EAPPQ56P03 285 aaPredicted RBP16.19■□□□□ 0.18
SCAMP4-202ENST00000409472 SCARA5Q6ZMJ2 495 aa16.19■□□□□ 0.18
SCAMP4-202ENST00000409472 UBLCP1Q8WVY7 318 aaPredicted RBP16.19■□□□□ 0.18
SCAMP4-202ENST00000409472 MAGOHBQ96A72 148 aaKnown RBP16.19■□□□□ 0.18
SCAMP4-202ENST00000409472 NAP1L3Q99457 506 aaPredicted RBP16.19■□□□□ 0.18
SCAMP4-202ENST00000409472 MRPL4Q9BYD3 311 aaKnown RBP16.19■□□□□ 0.18
SCAMP4-202ENST00000409472 RNPEPQ9H4A4 650 aa16.19■□□□□ 0.18
SCAMP4-202ENST00000409472 GRHL1Q9NZI5 618 aa16.19■□□□□ 0.18
SCAMP4-202ENST00000409472 DNAH12Q6ZR08 3092 aa16.19■□□□□ 0.18
SCAMP4-202ENST00000409472 SHOX2O60902 331 aaPredicted RBP16.19■□□□□ 0.18
SCAMP4-202ENST00000409472 LDHAP00338 332 aaKnown RBP16.19■□□□□ 0.18
SCAMP4-202ENST00000409472 RPL21P46778 160 aaKnown RBP16.19■□□□□ 0.18
SCAMP4-202ENST00000409472 IGBP1P78318 339 aa16.19■□□□□ 0.18
SCAMP4-202ENST00000409472 DHX9Q08211 1270 aaKnown RBP16.19■□□□□ 0.18
SCAMP4-202ENST00000409472 IER5Q5VY09 327 aa16.19■□□□□ 0.18
SCAMP4-202ENST00000409472 CCDC137Q6PK04 289 aaKnown RBP16.19■□□□□ 0.18
SCAMP4-202ENST00000409472 ZPBP2Q6X784 338 aa16.19■□□□□ 0.18
SCAMP4-202ENST00000409472 THNSL1Q8IYQ7 743 aa16.19■□□□□ 0.18
SCAMP4-202ENST00000409472 EIF1ADQ8N9N8 165 aaKnown RBP16.19■□□□□ 0.18
SCAMP4-202ENST00000409472 FBXO25Q8TCJ0 367 aa16.19■□□□□ 0.18
SCAMP4-202ENST00000409472 ATG4AQ8WYN0 398 aa16.19■□□□□ 0.18
SCAMP4-202ENST00000409472 SYT17Q9BSW7 474 aa16.19■□□□□ 0.18
SCAMP4-202ENST00000409472 THAP12O43422 761 aa16.18■□□□□ 0.18
SCAMP4-202ENST00000409472 POTEJP0CG39 1038 aa16.18■□□□□ 0.18
SCAMP4-202ENST00000409472 PDCLQ13371 301 aa16.18■□□□□ 0.18
SCAMP4-202ENST00000409472 SKIDA1Q1XH10 827 aa16.18■□□□□ 0.18
SCAMP4-202ENST00000409472 ANKS1BQ7Z6G8 1248 aa16.18■□□□□ 0.18
SCAMP4-202ENST00000409472 UBR7Q8N806 425 aa16.18■□□□□ 0.18
SCAMP4-202ENST00000409472 C1orf54Q8WWF1 131 aa16.18■□□□□ 0.18
SCAMP4-202ENST00000409472 FAM167AQ96KS9 214 aa16.18■□□□□ 0.18
SCAMP4-202ENST00000409472 CENPHQ9H3R5 247 aa16.18■□□□□ 0.18
SCAMP4-202ENST00000409472 PLXNA1Q9UIW2 1896 aa16.18■□□□□ 0.18
SCAMP4-202ENST00000409472 INO80B-WBP1J3KQ70 363 aa16.18■□□□□ 0.18
SCAMP4-202ENST00000409472 MYO1FO00160 1098 aa16.18■□□□□ 0.18
SCAMP4-202ENST00000409472 ASS1P00966 412 aaKnown RBP16.18■□□□□ 0.18
SCAMP4-202ENST00000409472 HOXC6P09630 235 aa16.18■□□□□ 0.18
SCAMP4-202ENST00000409472 PLTPP55058 493 aa16.18■□□□□ 0.18
SCAMP4-202ENST00000409472 RWDD2BP57060 319 aa16.18■□□□□ 0.18
SCAMP4-202ENST00000409472 PTP4A2Q12974 167 aa16.18■□□□□ 0.18
SCAMP4-202ENST00000409472 CD302Q8IX05 232 aa16.18■□□□□ 0.18
SCAMP4-202ENST00000409472 ABRAQ8N0Z2 381 aa16.18■□□□□ 0.18
SCAMP4-202ENST00000409472 FMO2Q99518 471 aa16.18■□□□□ 0.18
SCAMP4-202ENST00000409472 FAM118BQ9BPY3 351 aa16.18■□□□□ 0.18
SCAMP4-202ENST00000409472 INO80BQ9C086 356 aaPredicted RBP16.18■□□□□ 0.18
SCAMP4-202ENST00000409472 EPB41L4BQ9H329 900 aa16.18■□□□□ 0.18
SCAMP4-202ENST00000409472 FAM114A2Q9NRY5 505 aa16.18■□□□□ 0.18
SCAMP4-202ENST00000409472 CPSF3Q9UKF6 684 aaKnown RBP16.18■□□□□ 0.18
SCAMP4-202ENST00000409472 ATP8A1Q9Y2Q0 1164 aa16.18■□□□□ 0.18
SCAMP4-202ENST00000409472 MEFVO15553 781 aaPredicted RBP16.17■□□□□ 0.18
SCAMP4-202ENST00000409472 TCF4P15884 667 aa16.17■□□□□ 0.18
SCAMP4-202ENST00000409472 ZNF132P52740 706 aa16.17■□□□□ 0.18
SCAMP4-202ENST00000409472 TAS2R40P59535 323 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms