RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 B2RBV5 119 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 SLC37A4O43826 429 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 IVDP26440 423 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 SOX5P35711 763 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 CCR3P51677 355 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 NAPAP54920 295 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 ACTR3P61158 418 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 COG7P83436 770 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 TRMT5Q32P41 509 aaKnown RBP13.53□□□□□ -0.24
HERC3-203ENST00000407637 HERC4Q5GLZ8 1057 aaPredicted RBP13.53□□□□□ -0.24
HERC3-203ENST00000407637 C1orf146Q5VVC0 180 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 C11orf63Q6NUN7 778 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 FBXL19Q6PCT2 694 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 UGT2A3Q6UWM9 527 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 TSHZ1Q6ZSZ6 1077 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 CCDC110Q8TBZ0 833 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 ATG4AQ8WYN0 398 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 MAML3Q96JK9 1138 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 TTC25Q96NG3 672 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 TSPAN18Q96SJ8 248 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 ANAPC5Q9UJX4 755 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 ANKRD62A6NC57 917 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 RGL2O15211 777 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 CLDN3O15551 220 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 TFAP2AP05549 437 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 FGRP09769 529 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 VCLP18206 1134 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 ADRA1DP25100 572 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 CDK16Q00536 496 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 NCOA4Q13772 614 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 MMEL1Q495T6 779 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 MDH1BQ5I0G3 518 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 C6orf163Q5TEZ5 329 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 KRT79Q5XKE5 535 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 NUP93Q8N1F7 819 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 C12orf50Q8NA57 414 aaPredicted RBP13.53□□□□□ -0.24
HERC3-203ENST00000407637 SHKBP1Q8TBC3 707 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 RIOK1Q9BRS2 568 aaKnown RBP13.53□□□□□ -0.24
HERC3-203ENST00000407637 GRIP2Q9C0E4 1043 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 LRRC27Q9C0I9 530 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 RBM38Q9H0Z9 239 aaKnown RBP13.53□□□□□ -0.24
HERC3-203ENST00000407637 CPVLQ9H3G5 476 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 ZHX3Q9H4I2 956 aa13.53□□□□□ -0.24
HERC3-203ENST00000407637 TUT1Q9H6E5 874 aaKnown RBP13.53□□□□□ -0.24
HERC3-203ENST00000407637 HTR3EA5X5Y0 456 aa13.52□□□□□ -0.24
HERC3-203ENST00000407637 TSPY2A6NKD2 308 aa13.52□□□□□ -0.24
HERC3-203ENST00000407637 MAGEC1O60732 1142 aa13.52□□□□□ -0.24
HERC3-203ENST00000407637 COL6A2P12110 1019 aa13.52□□□□□ -0.24
HERC3-203ENST00000407637 ATF2P15336 505 aa13.52□□□□□ -0.24
HERC3-203ENST00000407637 RPL5P46777 297 aaKnown RBP13.52□□□□□ -0.24
HERC3-203ENST00000407637 CASP5P51878 434 aa13.52□□□□□ -0.24
HERC3-203ENST00000407637 SGO2Q562F6 1265 aa13.52□□□□□ -0.24
HERC3-203ENST00000407637 FRMD5Q7Z6J6 570 aa13.52□□□□□ -0.24
HERC3-203ENST00000407637 ULK2Q8IYT8 1036 aa13.52□□□□□ -0.24
HERC3-203ENST00000407637 TRIM55Q9BYV6 548 aa13.52□□□□□ -0.24
HERC3-203ENST00000407637 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.52□□□□□ -0.242e-10■■■■■ 346.1
HERC3-203ENST00000407637 CHST7Q9NS84 486 aa13.52□□□□□ -0.24
HERC3-203ENST00000407637 TBCCD1Q9NVR7 557 aa13.52□□□□□ -0.24
HERC3-203ENST00000407637 SLC7A8Q9UHI5 535 aa13.52□□□□□ -0.24
HERC3-203ENST00000407637 MYH14Q7Z406 1995 aaKnown RBP13.52□□□□□ -0.24
HERC3-203ENST00000407637 A0A1W2PPM1 405 aa13.52□□□□□ -0.25
HERC3-203ENST00000407637 PEX2P28328 305 aa13.52□□□□□ -0.25
HERC3-203ENST00000407637 HOXA7P31268 230 aaPredicted RBP13.52□□□□□ -0.25
HERC3-203ENST00000407637 FXR2P51116 673 aaKnown RBP eCLIP13.52□□□□□ -0.25
HERC3-203ENST00000407637 KRT72Q14CN4 511 aa13.52□□□□□ -0.25
HERC3-203ENST00000407637 CAPN12Q6ZSI9 719 aa13.52□□□□□ -0.25
HERC3-203ENST00000407637 DHDDSQ86SQ9 333 aa13.52□□□□□ -0.25
HERC3-203ENST00000407637 RHOT2Q8IXI1 618 aa13.52□□□□□ -0.25
HERC3-203ENST00000407637 ATP11CQ8NB49 1132 aa13.52□□□□□ -0.25
HERC3-203ENST00000407637 PNMA1Q8ND90 353 aa13.52□□□□□ -0.25
HERC3-203ENST00000407637 RBM15BQ8NDT2 890 aaKnown RBP13.52□□□□□ -0.25
HERC3-203ENST00000407637 ZFP28Q8NHY6 868 aa13.52□□□□□ -0.25
HERC3-203ENST00000407637 PYDC1Q8WXC3 89 aa13.52□□□□□ -0.25
HERC3-203ENST00000407637 MTMR9Q96QG7 549 aa13.52□□□□□ -0.25
HERC3-203ENST00000407637 SYT11Q9BT88 431 aa13.52□□□□□ -0.25
HERC3-203ENST00000407637 THTPAQ9BU02 230 aa13.52□□□□□ -0.25
HERC3-203ENST00000407637 TRAIPQ9BWF2 469 aa13.52□□□□□ -0.25
HERC3-203ENST00000407637 C12orf65Q9H3J6 166 aaKnown RBP13.52□□□□□ -0.25
HERC3-203ENST00000407637 LRRC19Q9H756 370 aa13.52□□□□□ -0.25
HERC3-203ENST00000407637 ALG13Q9NP73 1137 aaKnown RBP13.52□□□□□ -0.25
HERC3-203ENST00000407637 DNAJB4Q9UDY4 337 aa13.52□□□□□ -0.25
HERC3-203ENST00000407637 MAD2L2Q9UI95 211 aa13.52□□□□□ -0.25
HERC3-203ENST00000407637 LAMB1P07942 1786 aa13.52□□□□□ -0.25
HERC3-203ENST00000407637 FCHO1O14526 889 aa13.51□□□□□ -0.25
HERC3-203ENST00000407637 ADCY3O60266 1144 aa13.51□□□□□ -0.25
HERC3-203ENST00000407637 DNAJC6O75061 913 aa13.51□□□□□ -0.25
HERC3-203ENST00000407637 AKAP3O75969 853 aa13.51□□□□□ -0.25
HERC3-203ENST00000407637 TDP2O95551 362 aa13.51□□□□□ -0.25
HERC3-203ENST00000407637 CLPTM1O96005 669 aa13.51□□□□□ -0.25
HERC3-203ENST00000407637 ENO1P06733 434 aaKnown RBP13.51□□□□□ -0.25
HERC3-203ENST00000407637 CYP2D6P10635 497 aa13.51□□□□□ -0.25
HERC3-203ENST00000407637 TNFAIP3P21580 790 aa13.51□□□□□ -0.25
HERC3-203ENST00000407637 RRM1P23921 792 aa13.51□□□□□ -0.25
HERC3-203ENST00000407637 ADCY8P40145 1251 aa13.51□□□□□ -0.25
HERC3-203ENST00000407637 HALP42357 657 aa13.51□□□□□ -0.25
HERC3-203ENST00000407637 HIRAP54198 1017 aaPredicted RBP13.51□□□□□ -0.25
HERC3-203ENST00000407637 BTKQ06187 659 aa13.51□□□□□ -0.25
HERC3-203ENST00000407637 LPIN1Q14693 890 aa13.51□□□□□ -0.25
HERC3-203ENST00000407637 DRAP1Q14919 205 aaPredicted RBP13.51□□□□□ -0.25
HERC3-203ENST00000407637 MYLK3Q32MK0 819 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms