RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 ACOT1Q86TX2 421 aa13.87□□□□□ -0.19
PTPRN2-202ENST00000389416 PPP4R1Q8TF05 950 aa13.87□□□□□ -0.19
PTPRN2-202ENST00000389416 HASPINQ8TF76 798 aa13.87□□□□□ -0.19
PTPRN2-202ENST00000389416 CFAP57Q96MR6 1250 aa13.87□□□□□ -0.19
PTPRN2-202ENST00000389416 RNF208Q9H0X6 261 aa13.87□□□□□ -0.19
PTPRN2-202ENST00000389416 BTBD19C9JJ37 291 aa13.87□□□□□ -0.19
PTPRN2-202ENST00000389416 PQBP1O60828 265 aaKnown RBP13.87□□□□□ -0.19
PTPRN2-202ENST00000389416 GARSP41250 739 aaKnown RBP13.87□□□□□ -0.19
PTPRN2-202ENST00000389416 NOGQ13253 232 aa13.87□□□□□ -0.19
PTPRN2-202ENST00000389416 MKRN4PQ13434 485 aaPredicted RBP13.87□□□□□ -0.19
PTPRN2-202ENST00000389416 MORC4Q8TE76 937 aa13.87□□□□□ -0.19
PTPRN2-202ENST00000389416 SPIRE2Q8WWL2 714 aa13.87□□□□□ -0.19
PTPRN2-202ENST00000389416 SNTG2Q9NY99 539 aa13.87□□□□□ -0.19
PTPRN2-202ENST00000389416 TRAF3IP3Q9Y228 551 aa13.87□□□□□ -0.19
PTPRN2-202ENST00000389416 AKAP5P24588 427 aa13.86□□□□□ -0.19
PTPRN2-202ENST00000389416 PSEN2P49810 448 aa13.86□□□□□ -0.19
PTPRN2-202ENST00000389416 ZNF131P52739 623 aa13.86□□□□□ -0.19
PTPRN2-202ENST00000389416 NT5DC1Q5TFE4 455 aa13.86□□□□□ -0.19
PTPRN2-202ENST00000389416 HEATR6Q6AI08 1181 aaKnown RBP13.86□□□□□ -0.19
PTPRN2-202ENST00000389416 SH3RF1Q7Z6J0 888 aa13.86□□□□□ -0.19
PTPRN2-202ENST00000389416 FAM71BQ8TC56 605 aa13.86□□□□□ -0.19
PTPRN2-202ENST00000389416 TMC2Q8TDI7 906 aa13.86□□□□□ -0.19
PTPRN2-202ENST00000389416 CGRRF1Q99675 332 aa13.86□□□□□ -0.19
PTPRN2-202ENST00000389416 HMX1Q9NP08 348 aaPredicted RBP13.86□□□□□ -0.19
PTPRN2-202ENST00000389416 ATP11BQ9Y2G3 1177 aa13.86□□□□□ -0.19
PTPRN2-202ENST00000389416 ALG6Q9Y672 507 aa13.86□□□□□ -0.19
PTPRN2-202ENST00000389416 FZD9O00144 591 aa13.86□□□□□ -0.19
PTPRN2-202ENST00000389416 RASGRF2O14827 1237 aa13.86□□□□□ -0.19
PTPRN2-202ENST00000389416 SP3Q02447 781 aa13.86□□□□□ -0.19
PTPRN2-202ENST00000389416 CUL1Q13616 776 aa13.86□□□□□ -0.19
PTPRN2-202ENST00000389416 DEFB128Q7Z7B8 93 aa13.86□□□□□ -0.19
PTPRN2-202ENST00000389416 AFAP1L2Q8N4X5 818 aa13.86□□□□□ -0.19
PTPRN2-202ENST00000389416 ETNPPLQ8TBG4 499 aa13.86□□□□□ -0.19
PTPRN2-202ENST00000389416 CALR3Q96L12 384 aaKnown RBP13.86□□□□□ -0.19
PTPRN2-202ENST00000389416 ZNF512Q96ME7 567 aaPredicted RBP13.86□□□□□ -0.19
PTPRN2-202ENST00000389416 PPP1R12CQ9BZL4 782 aa13.86□□□□□ -0.19
PTPRN2-202ENST00000389416 SMARCAL1Q9NZC9 954 aa13.86□□□□□ -0.19
PTPRN2-202ENST00000389416 LCMT1Q9UIC8 334 aa13.86□□□□□ -0.19
PTPRN2-202ENST00000389416 DPYSL4O14531 572 aa13.86□□□□□ -0.19
PTPRN2-202ENST00000389416 AP1B1Q10567 949 aa13.86□□□□□ -0.19
PTPRN2-202ENST00000389416 GPS1Q13098 491 aa13.86□□□□□ -0.19
PTPRN2-202ENST00000389416 THOC5Q13769 683 aaKnown RBP13.86□□□□□ -0.19
PTPRN2-202ENST00000389416 GOLGA7BQ2TAP0 167 aa13.86□□□□□ -0.19
PTPRN2-202ENST00000389416 PDGFCQ9NRA1 345 aa13.86□□□□□ -0.19
PTPRN2-202ENST00000389416 INTS9Q9NV88 658 aaKnown RBP13.86□□□□□ -0.19
PTPRN2-202ENST00000389416 ABI2Q9NYB9 513 aaPredicted RBP13.86□□□□□ -0.19
PTPRN2-202ENST00000389416 PRRG1O14668 218 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 SH3BP5O60239 455 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 KPNA6O60684 536 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 RALAP11233 206 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 COMTP21964 271 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 PNPLA4P41247 253 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 ALDH7A1P49419 539 aaKnown RBP13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 SULT1E1P49888 294 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 MAP2K5Q13163 448 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 TSTA3Q13630 321 aaPredicted RBP13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 DCAF6Q58WW2 860 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 PCGF5Q86SE9 256 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 PLA2G6O60733 806 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 ITGB3BPQ13352 177 aaPredicted RBP13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 GLE1Q53GS7 698 aaKnown RBP13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 EMBQ6PCB8 327 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 CAPS2Q9BXY5 557 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 THAP2Q9H0W7 228 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 RNF19AQ9NV58 838 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 DDX56Q9NY93 547 aaKnown RBP13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 SLC15A5A6NIM6 579 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 ACKR2O00590 384 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 MMEP08473 750 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 TMEM253P0C7T8 217 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 CALRP27797 417 aaKnown RBP13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 EFCAB13Q8IY85 973 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 DCLK2Q8N568 766 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 MCUQ8NE86 351 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 TNFRSF25Q93038 417 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 TATDN2Q93075 761 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 HSD17B14Q9BPX1 270 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 PORCNQ9H237 461 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 PFDN4Q9NQP4 134 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 MRFAP1Q9Y605 127 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 DUSP10Q9Y6W6 482 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 RGPD5Q99666 1765 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 ZC3H11AO75152 810 aaKnown RBP eCLIP13.85□□□□□ -0.191e-6■■■□□ 15
PTPRN2-202ENST00000389416 THP07101 528 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 CHRNA3P32297 505 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 SLC1A1P43005 524 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 BFSP2Q13515 415 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 SMAD1Q15797 465 aaKnown RBP13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 TAF2Q6P1X5 1199 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 DNAAF5Q86Y56 855 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 SHCBP1Q8NEM2 672 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 SYN2Q92777 582 aaPredicted RBP13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 SLC35C1Q96A29 364 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 TMEM169Q96HH4 297 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 MED15Q96RN5 788 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 MMTAG2Q9BU76 263 aaKnown RBP13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 NOVA2Q9UNW9 492 aaKnown RBP13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 FAN1Q9Y2M0 1017 aa13.85□□□□□ -0.19
PTPRN2-202ENST00000389416 ANKRD63C9JTQ0 380 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms