RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 SPECC1Q5M775 1068 aa11.25□□□□□ -0.61
COL5A1-202ENST00000371820 IQCEQ6IPM2 695 aa11.25□□□□□ -0.61
COL5A1-202ENST00000371820 CCDC70Q6NSX1 233 aa11.25□□□□□ -0.61
COL5A1-202ENST00000371820 SYCE2Q6PIF2 218 aa11.25□□□□□ -0.61
COL5A1-202ENST00000371820 FOXR2Q6PJQ5 311 aa11.25□□□□□ -0.61
COL5A1-202ENST00000371820 CABP7Q86V35 215 aa11.25□□□□□ -0.61
COL5A1-202ENST00000371820 CCDC170Q8IYT3 715 aa11.25□□□□□ -0.61
COL5A1-202ENST00000371820 RASSF8Q8NHQ8 419 aa11.25□□□□□ -0.61
COL5A1-202ENST00000371820 EPSTI1Q96J88 318 aa11.25□□□□□ -0.61
COL5A1-202ENST00000371820 ZBP1Q9H171 429 aa11.25□□□□□ -0.61
COL5A1-202ENST00000371820 NXF3Q9H4D5 531 aaKnown RBP11.25□□□□□ -0.61
COL5A1-202ENST00000371820 PARP2Q9UGN5 583 aa11.25□□□□□ -0.61
COL5A1-202ENST00000371820 IRAK3Q9Y616 596 aa11.25□□□□□ -0.61
COL5A1-202ENST00000371820 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.24□□□□□ -0.61
COL5A1-202ENST00000371820 C2orf71A6NGG8 1288 aa11.24□□□□□ -0.61
COL5A1-202ENST00000371820 CCDC169A6NNP5 214 aa11.24□□□□□ -0.61
COL5A1-202ENST00000371820 K7ERI5 159 aa11.24□□□□□ -0.61
COL5A1-202ENST00000371820 URODP06132 367 aa11.24□□□□□ -0.61
COL5A1-202ENST00000371820 PNMA6AP0CW24 399 aaPredicted RBP11.24□□□□□ -0.61
COL5A1-202ENST00000371820 GUCY2CP25092 1073 aa11.24□□□□□ -0.61
COL5A1-202ENST00000371820 CDC25AP30304 524 aa11.24□□□□□ -0.61
COL5A1-202ENST00000371820 OR1G1P47890 313 aa11.24□□□□□ -0.61
COL5A1-202ENST00000371820 SCNN1GP51170 649 aa11.24□□□□□ -0.61
COL5A1-202ENST00000371820 PEX3P56589 373 aa11.24□□□□□ -0.61
COL5A1-202ENST00000371820 E2F4Q16254 413 aa11.24□□□□□ -0.61
COL5A1-202ENST00000371820 IL17AQ16552 155 aa11.24□□□□□ -0.61
COL5A1-202ENST00000371820 MAP9Q49MG5 647 aa11.24□□□□□ -0.61
COL5A1-202ENST00000371820 RINT1Q6NUQ1 792 aa11.24□□□□□ -0.61
COL5A1-202ENST00000371820 LLGL2Q6P1M3 1020 aa11.24□□□□□ -0.61
COL5A1-202ENST00000371820 ELMSAN1Q6PJG2 1045 aa11.24□□□□□ -0.61
COL5A1-202ENST00000371820 APTXQ7Z2E3 356 aaKnown RBP11.24□□□□□ -0.61
COL5A1-202ENST00000371820 HDXQ7Z353 690 aa11.24□□□□□ -0.61
COL5A1-202ENST00000371820 ZNF280BQ86YH2 543 aa11.24□□□□□ -0.61
COL5A1-202ENST00000371820 SYT2Q8N9I0 419 aaPredicted RBP11.24□□□□□ -0.61
COL5A1-202ENST00000371820 BSNDQ8WZ55 320 aa11.24□□□□□ -0.61
COL5A1-202ENST00000371820 RUBCNQ92622 972 aa11.24□□□□□ -0.61
COL5A1-202ENST00000371820 NAPGQ99747 312 aaPredicted RBP11.24□□□□□ -0.61
COL5A1-202ENST00000371820 MMTAG2Q9BU76 263 aaKnown RBP11.24□□□□□ -0.61
COL5A1-202ENST00000371820 COLEC11Q9BWP8 271 aa11.24□□□□□ -0.61
COL5A1-202ENST00000371820 EMILIN2Q9BXX0 1053 aa11.24□□□□□ -0.61
COL5A1-202ENST00000371820 EDEM3Q9BZQ6 932 aa11.24□□□□□ -0.61
COL5A1-202ENST00000371820 CCDC113Q9H0I3 377 aa11.24□□□□□ -0.61
COL5A1-202ENST00000371820 PDZD7Q9H5P4 517 aa11.24□□□□□ -0.61
COL5A1-202ENST00000371820 TMEM134Q9H6X4 195 aa11.24□□□□□ -0.61
COL5A1-202ENST00000371820 KMT5AQ9NQR1 393 aa11.24□□□□□ -0.61
COL5A1-202ENST00000371820 INTS13Q9NVM9 706 aa11.24□□□□□ -0.61
COL5A1-202ENST00000371820 DZANK1Q9NVP4 752 aa11.24□□□□□ -0.61
COL5A1-202ENST00000371820 PSD3Q9NYI0 1048 aa11.24□□□□□ -0.61
COL5A1-202ENST00000371820 DNAJB4Q9UDY4 337 aa11.24□□□□□ -0.61
COL5A1-202ENST00000371820 LUC7L2Q9Y383 392 aaKnown RBP11.24□□□□□ -0.61
COL5A1-202ENST00000371820 HES2Q9Y543 173 aa11.24□□□□□ -0.61
COL5A1-202ENST00000371820 ZDBF2Q9HCK1 2354 aa11.24□□□□□ -0.61
COL5A1-202ENST00000371820 TDRD15B5MCY1 1934 aaKnown RBP11.23□□□□□ -0.61
COL5A1-202ENST00000371820 CTAGE15A4D2H0 777 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 KCNJ18B7U540 433 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 H0YCG3 227 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 NRP1O14786 923 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 KRT86O43790 486 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 HIP1RO75146 1068 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 DDHD2O94830 711 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 RHOBTB3O94955 611 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 SSBP05455 408 aaKnown RBP eCLIP11.23□□□□□ -0.61
COL5A1-202ENST00000371820 CTAGE8P0CG41 777 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 SCP2P22307 547 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 SMTNP53814 917 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 CDK17Q00537 523 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 GRIN1Q05586 938 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 CKAP4Q07065 602 aaKnown RBP11.23□□□□□ -0.61
COL5A1-202ENST00000371820 DSC1Q08554 894 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 SIGLEC14Q08ET2 396 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 STRN3Q13033 797 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 PSMD2Q13200 908 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 KCNJ12Q14500 433 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 NAA30Q147X3 362 aaPredicted RBP11.23□□□□□ -0.61
COL5A1-202ENST00000371820 PTPN21Q16825 1174 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 FIGNQ5HY92 759 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 ATF7IP2Q5U623 682 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 CES5AQ6NT32 575 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 C1orf186Q6ZWK4 172 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 CTAGE6Q86UF2 777 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 TMEM173Q86WV6 379 aaPredicted RBP11.23□□□□□ -0.61
COL5A1-202ENST00000371820 CDR2LQ86X02 465 aaPredicted RBP11.23□□□□□ -0.61
COL5A1-202ENST00000371820 CTAGE4Q8IX94 777 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 COLGALT2Q8IYK4 626 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 ADSSL1Q8N142 457 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 PRSS33Q8NF86 280 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 NELFBQ8WX92 580 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 PBXIP1Q96AQ6 731 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 ARID3AQ99856 593 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 HERC2P3Q9BVR0 1158 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 APOL5Q9BWW9 433 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 MRPL4Q9BYD3 311 aaKnown RBP11.23□□□□□ -0.61
COL5A1-202ENST00000371820 TSGA10Q9BZW7 698 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 MRPL17Q9NRX2 175 aaKnown RBP11.23□□□□□ -0.61
COL5A1-202ENST00000371820 LARSQ9P2J5 1176 aaKnown RBP11.23□□□□□ -0.61
COL5A1-202ENST00000371820 HCFC2Q9Y5Z7 792 aa11.23□□□□□ -0.61
COL5A1-202ENST00000371820 EPN1Q9Y6I3 576 aaPredicted RBP11.23□□□□□ -0.61
COL5A1-202ENST00000371820 RECQL4O94761 1208 aa11.22□□□□□ -0.61
COL5A1-202ENST00000371820 SOD2P04179 222 aa11.22□□□□□ -0.61
COL5A1-202ENST00000371820 PLA2G4BP0C869 781 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms