RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 ATXN1P54253 815 aaKnown RBP3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 EIF4A2Q14240 407 aaKnown RBP3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 GALEQ14376 348 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 NFKBIBQ15653 356 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 SOWAHCQ53LP3 525 aaPredicted RBP3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 FBLN7Q53RD9 439 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 TMEM240Q5SV17 173 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 CNNM4Q6P4Q7 775 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 EPM2AIP1Q7L775 607 aaPredicted RBP3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 TEX11Q8IYF3 940 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 GIMAP7Q8NHV1 300 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 FNIP1Q8TF40 1166 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 LEO1Q8WVC0 666 aaPredicted RBP3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 DDX1Q92499 740 aaKnown RBP3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 TEKT1Q969V4 418 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 MENTQ9BUN1 341 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 SPATA9Q9BWV2 254 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 SEMA6CQ9H3T2 930 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 ZWILCHQ9H900 591 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 VEZTQ9HBM0 779 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 ABCF3Q9NUQ8 709 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 MTRRQ9UBK8 725 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 KNSTRNQ9Y448 316 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 PCDHB14Q9Y5E9 798 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 USP16Q9Y5T5 823 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 MGAMO43451 1857 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 NBEAQ8NFP9 2946 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 TENM4Q6N022 2769 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 PIEZO2Q9H5I5 2752 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 FSD2A1L4K1 749 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 TSPY2A6NKD2 308 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 RBAK-RBAKDNI3L0D1 243 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 STXBP3O00186 592 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 FRS3O43559 492 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 E2F6O75461 281 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 ATE1O95260 518 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 HTR3BO95264 441 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 NTSR2O95665 410 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 CPP00450 1065 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 TSPY3P0CV98 308 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 TSPY8P0CW00 308 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 PF4V1P10720 104 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 MTHFD1P11586 935 aaKnown RBP3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 IL4RP24394 825 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 CHKAP35790 457 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 TSPY1Q01534 308 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 SNAPC2Q13487 334 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 BECN1Q14457 450 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 TMEM201Q5SNT2 666 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 NUGGCQ68CJ6 796 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 SLC6A19Q695T7 634 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 LHFPL2Q6ZUX7 228 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 NEK10Q6ZWH5 1172 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 RUFY3Q7L099 469 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 CHST15Q7LFX5 561 aaPredicted RBP3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 TBC1D16Q8TBP0 767 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 KCNG4Q8TDN1 519 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 NSUN6Q8TEA1 469 aaKnown RBP3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 EDAQ92838 391 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 USP13Q92995 863 aaPredicted RBP3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 SGCZQ96LD1 299 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 FAM193BQ96PV7 902 aaPredicted RBP3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 FERD3LQ96RJ6 166 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 MPHOSPH8Q99549 860 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 BAG1Q99933 345 aaPredicted RBP3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 NCAPGQ9BPX3 1015 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 RMI1Q9H9A7 625 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 EHMT1Q9H9B1 1298 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 IRAK4Q9NWZ3 460 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 KCTD5Q9NXV2 234 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 REV1Q9UBZ9 1251 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 SAP30BPQ9UHR5 308 aaKnown RBP3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 LRCH1Q9Y2L9 728 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 CRYL1Q9Y2S2 319 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 COL4A4P53420 1690 aaPredicted RBP3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 SPTAN1Q13813 2472 aaKnown RBP3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 CFAP46Q8IYW2 2715 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 TEX15Q9BXT5 2789 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 OTOGLQ3ZCN5 2332 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 RTCAO00442 366 aaKnown RBP3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 RNMTO43148 476 aaKnown RBP3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 SGTAO43765 313 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 PEX10O60683 326 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 LRIG2O94898 1065 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 CST3P01034 146 aaPredicted RBP3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 PYGLP06737 847 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 FSTP19883 344 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 CYP2B6P20813 491 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 ENPP1P22413 925 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 CCND1P24385 295 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 SMARCA1P28370 1054 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 KRT9P35527 623 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 LIMK1P53667 647 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 PMS1P54277 932 aaKnown RBP3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 EVCP57679 992 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 TLE2Q04725 743 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 CBX2Q14781 532 aaPredicted RBP3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 MYBPC3Q14896 1274 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 TERF2Q15554 542 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 CCL14Q16627 93 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms