RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 ZC3H11AO75152 810 aaKnown RBP eCLIP15.8■□□□□ 0.12
CXCL12-201ENST00000343575 ASS1P00966 412 aaKnown RBP15.8■□□□□ 0.12
CXCL12-201ENST00000343575 ATF7P17544 494 aaPredicted RBP15.8■□□□□ 0.12
CXCL12-201ENST00000343575 PIK3CAP42336 1068 aa15.8■□□□□ 0.12
CXCL12-201ENST00000343575 HNRNPH2P55795 449 aaKnown RBP15.8■□□□□ 0.12
CXCL12-201ENST00000343575 MYL6P60660 151 aa15.8■□□□□ 0.12
CXCL12-201ENST00000343575 TMTC1Q8IUR5 882 aa15.8■□□□□ 0.12
CXCL12-201ENST00000343575 GSTCDQ8NEC7 633 aa15.8■□□□□ 0.12
CXCL12-201ENST00000343575 LINC01599Q8WXQ3 324 aa15.8■□□□□ 0.12
CXCL12-201ENST00000343575 KLK14Q9P0G3 267 aa15.8■□□□□ 0.12
CXCL12-201ENST00000343575 NUB1Q9Y5A7 615 aa15.8■□□□□ 0.12
CXCL12-201ENST00000343575 PDCD11Q14690 1871 aaKnown RBP15.79■□□□□ 0.12
CXCL12-201ENST00000343575 PITPNM1O00562 1244 aa15.79■□□□□ 0.12
CXCL12-201ENST00000343575 URI1O94763 535 aaPredicted RBP15.79■□□□□ 0.12
CXCL12-201ENST00000343575 TMEM191BP0C7N4 346 aa15.79■□□□□ 0.12
CXCL12-201ENST00000343575 AFF1P51825 1210 aaKnown RBP15.79■□□□□ 0.12
CXCL12-201ENST00000343575 TMEM132DQ14C87 1099 aa15.79■□□□□ 0.12
CXCL12-201ENST00000343575 ASTE1Q2TB18 679 aaPredicted RBP15.79■□□□□ 0.12
CXCL12-201ENST00000343575 GLRA4Q5JXX5 417 aa15.79■□□□□ 0.12
CXCL12-201ENST00000343575 SFMBT2Q5VUG0 894 aa15.79■□□□□ 0.12
CXCL12-201ENST00000343575 CYP26C1Q6V0L0 522 aa15.79■□□□□ 0.12
CXCL12-201ENST00000343575 TOGARAM2Q6ZUX3 1019 aa15.79■□□□□ 0.12
CXCL12-201ENST00000343575 MRPL10Q7Z7H8 261 aaKnown RBP15.79■□□□□ 0.12
CXCL12-201ENST00000343575 CD302Q8IX05 232 aa15.79■□□□□ 0.12
CXCL12-201ENST00000343575 REXO1L1PQ8IX06 675 aa15.79■□□□□ 0.12
CXCL12-201ENST00000343575 PPM1KQ8N3J5 372 aa15.79■□□□□ 0.12
CXCL12-201ENST00000343575 OLIG1Q8TAK6 271 aa15.79■□□□□ 0.12
CXCL12-201ENST00000343575 NT5C1BQ96P26 610 aa15.79■□□□□ 0.12
CXCL12-201ENST00000343575 SPAG5Q96R06 1193 aa15.79■□□□□ 0.12
CXCL12-201ENST00000343575 ADAM2Q99965 735 aa15.79■□□□□ 0.12
CXCL12-201ENST00000343575 MCOLN1Q9GZU1 580 aa15.79■□□□□ 0.12
CXCL12-201ENST00000343575 ARFGAP3Q9NP61 516 aa15.79■□□□□ 0.12
CXCL12-201ENST00000343575 A0A0U1RQF3 1178 aa15.78■□□□□ 0.12
CXCL12-201ENST00000343575 SMIM28A0A1B0GU29 152 aa15.78■□□□□ 0.12
CXCL12-201ENST00000343575 ZNF623O75123 536 aa15.78■□□□□ 0.12
CXCL12-201ENST00000343575 RFX1P22670 979 aa15.78■□□□□ 0.12
CXCL12-201ENST00000343575 CASQ1P31415 396 aa15.78■□□□□ 0.12
CXCL12-201ENST00000343575 BFSP2Q13515 415 aa15.78■□□□□ 0.12
CXCL12-201ENST00000343575 ARHGAP44Q17R89 818 aa15.78■□□□□ 0.12
CXCL12-201ENST00000343575 TCTN1Q2MV58 587 aa15.78■□□□□ 0.12
CXCL12-201ENST00000343575 AGMOQ6ZNB7 445 aa15.78■□□□□ 0.12
CXCL12-201ENST00000343575 LPPQ93052 612 aa15.78■□□□□ 0.12
CXCL12-201ENST00000343575 EXOC4Q96A65 974 aa15.78■□□□□ 0.12
CXCL12-201ENST00000343575 C18orf25Q96B23 403 aaPredicted RBP15.78■□□□□ 0.12
CXCL12-201ENST00000343575 KIF12Q96FN5 646 aa15.78■□□□□ 0.12
CXCL12-201ENST00000343575 ANKRD36BP1Q96IX9 119 aa15.78■□□□□ 0.12
CXCL12-201ENST00000343575 IFIH1Q9BYX4 1025 aaKnown RBP15.78■□□□□ 0.12
CXCL12-201ENST00000343575 NUCKS1Q9H1E3 243 aaKnown RBP15.78■□□□□ 0.12
CXCL12-201ENST00000343575 WNT8AQ9H1J5 351 aa15.78■□□□□ 0.12
CXCL12-201ENST00000343575 PARP2Q9UGN5 583 aa15.78■□□□□ 0.12
CXCL12-201ENST00000343575 DAAM1Q9Y4D1 1078 aa15.78■□□□□ 0.12
CXCL12-201ENST00000343575 PTGESO14684 152 aa15.78■□□□□ 0.12
CXCL12-201ENST00000343575 PHACTR2O75167 634 aa15.78■□□□□ 0.12
CXCL12-201ENST00000343575 TNNC2P02585 160 aa15.78■□□□□ 0.12
CXCL12-201ENST00000343575 KCNE1P15382 129 aa15.78■□□□□ 0.12
CXCL12-201ENST00000343575 SOX5P35711 763 aa15.78■□□□□ 0.12
CXCL12-201ENST00000343575 YARSP54577 528 aaKnown RBP15.78■□□□□ 0.12
CXCL12-201ENST00000343575 NOP14P78316 857 aaKnown RBP15.78■□□□□ 0.12
CXCL12-201ENST00000343575 GCNT1Q02742 428 aa15.78■□□□□ 0.12
CXCL12-201ENST00000343575 BRD3Q15059 726 aa15.78■□□□□ 0.12
CXCL12-201ENST00000343575 LRRC26Q2I0M4 334 aa15.78■□□□□ 0.12
CXCL12-201ENST00000343575 CC2D1AQ6P1N0 951 aaPredicted RBP15.78■□□□□ 0.12
CXCL12-201ENST00000343575 NT5DC4Q86YG4 428 aa15.78■□□□□ 0.12
CXCL12-201ENST00000343575 SHC3Q92529 594 aa15.78■□□□□ 0.12
CXCL12-201ENST00000343575 ZFP42Q96MM3 310 aa15.78■□□□□ 0.12
CXCL12-201ENST00000343575 NHEJ1Q9H9Q4 299 aaPredicted RBP15.78■□□□□ 0.12
CXCL12-201ENST00000343575 ST7Q9NRC1 585 aa15.78■□□□□ 0.12
CXCL12-201ENST00000343575 TUBGCP4Q9UGJ1 667 aa15.78■□□□□ 0.12
CXCL12-201ENST00000343575 DERAQ9Y315 318 aa15.78■□□□□ 0.12
CXCL12-201ENST00000343575 SCN5AQ14524 2016 aa15.77■□□□□ 0.12
CXCL12-201ENST00000343575 EVI5O60447 810 aa15.77■□□□□ 0.11
CXCL12-201ENST00000343575 GFPT2O94808 682 aa15.77■□□□□ 0.11
CXCL12-201ENST00000343575 ITGB3P05106 788 aa15.77■□□□□ 0.11
CXCL12-201ENST00000343575 PRKCIP41743 596 aa15.77■□□□□ 0.11
CXCL12-201ENST00000343575 ARID5AQ03989 594 aa15.77■□□□□ 0.11
CXCL12-201ENST00000343575 SOX4Q06945 474 aaPredicted RBP15.77■□□□□ 0.11
CXCL12-201ENST00000343575 ZNF598Q86UK7 904 aaKnown RBP15.77■□□□□ 0.11
CXCL12-201ENST00000343575 VWCEQ96DN2 955 aa15.77■□□□□ 0.11
CXCL12-201ENST00000343575 DESI2Q9BSY9 194 aa15.77■□□□□ 0.11
CXCL12-201ENST00000343575 CARD6Q9BX69 1037 aa15.77■□□□□ 0.11
CXCL12-201ENST00000343575 C11orf49Q9H6J7 331 aa15.77■□□□□ 0.11
CXCL12-201ENST00000343575 MIOSQ9NXC5 875 aa15.77■□□□□ 0.11
CXCL12-201ENST00000343575 DPP3Q9NY33 737 aa15.77■□□□□ 0.11
CXCL12-201ENST00000343575 TBX21Q9UL17 535 aa15.77■□□□□ 0.11
CXCL12-201ENST00000343575 REXO2Q9Y3B8 237 aaKnown RBP15.77■□□□□ 0.11
CXCL12-201ENST00000343575 SCN1AP35498 2009 aa15.76■□□□□ 0.11
CXCL12-201ENST00000343575 A0A0U1RQJ8 604 aa15.76■□□□□ 0.11
CXCL12-201ENST00000343575 DCDC2CA8MYV0 355 aa15.76■□□□□ 0.11
CXCL12-201ENST00000343575 C9IYK1 514 aa15.76■□□□□ 0.11
CXCL12-201ENST00000343575 PPEF2O14830 753 aa15.76■□□□□ 0.11
CXCL12-201ENST00000343575 ZNF263O14978 683 aa15.76■□□□□ 0.11
CXCL12-201ENST00000343575 TLR3O15455 904 aaKnown RBP15.76■□□□□ 0.11
CXCL12-201ENST00000343575 SERPING1P05155 500 aa15.76■□□□□ 0.11
CXCL12-201ENST00000343575 ACO1P21399 889 aaKnown RBP15.76■□□□□ 0.11
CXCL12-201ENST00000343575 EIF4A3P38919 411 aaKnown RBP15.76■□□□□ 0.11
CXCL12-201ENST00000343575 STAT1P42224 750 aa15.76■□□□□ 0.11
CXCL12-201ENST00000343575 MAPK8IP2Q13387 824 aaPredicted RBP15.76■□□□□ 0.11
CXCL12-201ENST00000343575 SMC1AQ14683 1233 aaKnown RBP15.76■□□□□ 0.11
CXCL12-201ENST00000343575 NAB2Q15742 525 aa15.76■□□□□ 0.11
CXCL12-201ENST00000343575 SGSM1Q2NKQ1 1148 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms