RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 ARSJQ5FYB0 599 aaPredicted RBP11.63□□□□□ -0.55
MSH6-201ENST00000234420 KRT39Q6A163 491 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 MAP3K19Q56UN5 1328 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 MKRN4PQ13434 485 aaPredicted RBP11.63□□□□□ -0.55
MSH6-201ENST00000234420 DNAL1Q4LDG9 190 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 CYB5D1Q6P9G0 228 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 FAM213AQ9BRX8 229 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 HERC5Q9UII4 1024 aaKnown RBP11.63□□□□□ -0.55
MSH6-201ENST00000234420 ACADSP16219 412 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 MAN2A1Q16706 1144 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 ARMC4Q5T2S8 1044 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 ZNF496Q96IT1 587 aaPredicted RBP11.63□□□□□ -0.55
MSH6-201ENST00000234420 H2AFY2Q9P0M6 372 aaPredicted RBP11.63□□□□□ -0.55
MSH6-201ENST00000234420 BTBD7Q9P203 1132 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 ARHGEF10O15013 1369 aa11.63□□□□□ -0.55
MSH6-201ENST00000234420 PCF11O94913 1555 aaKnown RBP11.62□□□□□ -0.55
MSH6-201ENST00000234420 A0A087X0T9 212 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 FGFR1P11362 822 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 KCNA2P16389 499 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 FLT3P36888 993 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 GUCA1AP43080 201 aaPredicted RBP11.62□□□□□ -0.55
MSH6-201ENST00000234420 MAPRE2Q15555 327 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 SNAP47Q5SQN1 464 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 MDM1Q8TC05 714 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 STN1Q9H668 368 aaKnown RBP11.62□□□□□ -0.55
MSH6-201ENST00000234420 PCSK1NQ9UHG2 260 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 ADAMTS1Q9UHI8 967 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 FAM153AQ9UHL3 310 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.62□□□□□ -0.55
MSH6-201ENST00000234420 FGFR4P22455 802 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 NUP107P57740 925 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 DCTN2Q13561 401 aaKnown RBP11.62□□□□□ -0.55
MSH6-201ENST00000234420 MIEF2Q96C03 454 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 TAF1DQ9H5J8 278 aaPredicted RBP11.62□□□□□ -0.55
MSH6-201ENST00000234420 DDX56Q9NY93 547 aaKnown RBP11.62□□□□□ -0.55
MSH6-201ENST00000234420 KIF1BO60333 1816 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 BTBD18B2RXH4 712 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 TJP3O95049 919 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 ALBP02768 609 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 LRPAP1P30533 357 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 PHKA2P46019 1235 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 CPA2P48052 419 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 KLHL12Q53G59 568 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 KRT74Q7RTS7 529 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 ERICH1Q86X53 443 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 UNC5CLQ8IV45 518 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 DDI1Q8WTU0 396 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 ABI2Q9NYB9 513 aaPredicted RBP11.62□□□□□ -0.55
MSH6-201ENST00000234420 WDR62O43379 1518 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 GRXCR2A6NFK2 248 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 PDZK1P1A8MUH7 402 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 ATP9BO43861 1147 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 ZC3H11AO75152 810 aaKnown RBP eCLIP11.62□□□□□ -0.55
MSH6-201ENST00000234420 ABCD1P33897 745 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 PSMC2P35998 433 aaKnown RBP11.62□□□□□ -0.55
MSH6-201ENST00000234420 ZSCAN18Q8TBC5 510 aaPredicted RBP11.62□□□□□ -0.55
MSH6-201ENST00000234420 P2RX5Q93086 422 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 MRPL1Q9BYD6 325 aaKnown RBP11.62□□□□□ -0.55
MSH6-201ENST00000234420 HDHD2Q9H0R4 259 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 BHMT2Q9H2M3 363 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 TMEM39AQ9NV64 488 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 STK17AQ9UEE5 414 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 STK39Q9UEW8 545 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 B2RBV5 119 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 CFAP99D6REC4 459 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 DGKIO75912 1065 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 CDC25AP30304 524 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 TAF5Q15542 800 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 NRDE2Q9H7Z3 1164 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 ADCY9O60503 1353 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 KPNA4O00629 521 aaPredicted RBP11.62□□□□□ -0.55
MSH6-201ENST00000234420 BCAR1P56945 870 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 ZBED6P86452 979 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 NCAPHQ15003 741 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 FASTKD1Q53R41 847 aaKnown RBP11.62□□□□□ -0.55
MSH6-201ENST00000234420 WLSQ5T9L3 541 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 SLC44A2Q8IWA5 706 aaPredicted RBP11.62□□□□□ -0.55
MSH6-201ENST00000234420 PHACTR4Q8IZ21 702 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 ZNF483Q8TF39 744 aaPredicted RBP11.62□□□□□ -0.55
MSH6-201ENST00000234420 BRIP1Q9BX63 1249 aa11.62□□□□□ -0.55
MSH6-201ENST00000234420 SENP6Q9GZR1 1112 aaPredicted RBP11.62□□□□□ -0.55
MSH6-201ENST00000234420 NCK2O43639 380 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 TIPRLO75663 272 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 HMGCS2P54868 508 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 CNDP1Q96KN2 507 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 SH2D3AQ9BRG2 576 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 GCOM2Q9BZD3 368 aaPredicted RBP11.61□□□□□ -0.55
MSH6-201ENST00000234420 ATAD3AQ9NVI7 634 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 FAM32AQ9Y421 112 aaKnown RBP11.61□□□□□ -0.55
MSH6-201ENST00000234420 ITSN2Q9NZM3 1697 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 CCL15-CCL14A0A0B4J2E2 113 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 CCL15Q16663 113 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 GNASQ5JWF2 1037 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 RBM23Q86U06 439 aaKnown RBP11.61□□□□□ -0.55
MSH6-201ENST00000234420 MICALL2Q8IY33 904 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 TTC8Q8TAM2 541 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 TBCKQ8TEA7 893 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 ZNF304Q9HCX3 659 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 USP27XA6NNY8 438 aa11.61□□□□□ -0.55
MSH6-201ENST00000234420 TLR2O60603 784 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms