RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeast

Gene TGA1, Length 73 nt, Biotype tRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TGA1	tA(UGC)A	YOR192C-C	Q3E736	78 aa		6.66	□□□□□ -1.34
TGA1	tA(UGC)A	SUS1	Q6WNK7	96 aa		6.66	□□□□□ -1.34
TGA1	tA(UGC)A	ODC2	Q99297	307 aa		6.66	□□□□□ -1.34
TGA1	tA(UGC)A	YLL053C	P0CD98	152 aa		6.65	□□□□□ -1.34
TGA1	tA(UGC)A	IFM1	P25038	676 aa		6.65	□□□□□ -1.34
TGA1	tA(UGC)A	GAR1	P28007	205 aa	Known RBP	6.65	□□□□□ -1.34
TGA1	tA(UGC)A	HOM6	P31116	359 aa	Known RBP	6.65	□□□□□ -1.34
TGA1	tA(UGC)A	YBL010C	P32788	280 aa		6.65	□□□□□ -1.34
TGA1	tA(UGC)A	FIG1	P38224	298 aa		6.65	□□□□□ -1.34
TGA1	tA(UGC)A	AIM46	P38885	310 aa		6.65	□□□□□ -1.34
TGA1	tA(UGC)A	RTT105	P40063	208 aa		6.65	□□□□□ -1.34
TGA1	tA(UGC)A	ERV29	P53337	310 aa		6.65	□□□□□ -1.34
TGA1	tA(UGC)A	MGR3	Q04472	501 aa		6.65	□□□□□ -1.34
TGA1	tA(UGC)A	MCM21	Q06675	368 aa		6.65	□□□□□ -1.34
TGA1	tA(UGC)A	YOL118C	Q08259	102 aa		6.65	□□□□□ -1.34
TGA1	tA(UGC)A	URA3	P03962	267 aa		6.64	□□□□□ -1.35
TGA1	tA(UGC)A	RPL3	P14126	387 aa	Known RBP	6.64	□□□□□ -1.35
TGA1	tA(UGC)A	URA6	P15700	204 aa		6.64	□□□□□ -1.35
TGA1	tA(UGC)A	DAL3	P32459	195 aa		6.64	□□□□□ -1.35
TGA1	tA(UGC)A	SPS18	P32572	300 aa		6.64	□□□□□ -1.35
TGA1	tA(UGC)A	CBT1	P36038	271 aa	Predicted RBP	6.64	□□□□□ -1.35
TGA1	tA(UGC)A	NTC20	P38302	140 aa	Predicted RBP	6.64	□□□□□ -1.35
TGA1	tA(UGC)A	BNA1	P47096	177 aa		6.64	□□□□□ -1.35
TGA1	tA(UGC)A	YGL262W	P53054	175 aa		6.64	□□□□□ -1.35
TGA1	tA(UGC)A	STD1	Q02794	444 aa		6.64	□□□□□ -1.35
TGA1	tA(UGC)A	MIX17	Q03667	156 aa		6.64	□□□□□ -1.35
TGA1	tA(UGC)A	YDR415C	Q04033	374 aa	Predicted RBP	6.64	□□□□□ -1.35
TGA1	tA(UGC)A	NOC4	Q06512	552 aa	Predicted RBP	6.64	□□□□□ -1.35
TGA1	tA(UGC)A	RAX2	Q12465	1220 aa		6.64	□□□□□ -1.35
TGA1	tA(UGC)A	ERG3	P32353	365 aa		6.63	□□□□□ -1.35
TGA1	tA(UGC)A	YKL102C	P34249	101 aa		6.63	□□□□□ -1.35
TGA1	tA(UGC)A	FLO10	P36170	1169 aa		6.63	□□□□□ -1.35
TGA1	tA(UGC)A	YJL118W	P47022	219 aa		6.63	□□□□□ -1.35
TGA1	tA(UGC)A	TAX4	P47030	604 aa		6.63	□□□□□ -1.35
TGA1	tA(UGC)A	TTI2	P47168	421 aa		6.63	□□□□□ -1.35
TGA1	tA(UGC)A	PEX27	Q08580	376 aa		6.63	□□□□□ -1.35
TGA1	tA(UGC)A	SUA7	P29055	345 aa	Predicted RBP	6.62	□□□□□ -1.35
TGA1	tA(UGC)A	MSS1	P32559	526 aa	Predicted RBP	6.62	□□□□□ -1.35
TGA1	tA(UGC)A	RPB7	P34087	171 aa		6.62	□□□□□ -1.35
TGA1	tA(UGC)A	YNK1	P36010	153 aa	Known RBP	6.62	□□□□□ -1.35
TGA1	tA(UGC)A	YGR042W	P53227	271 aa		6.62	□□□□□ -1.35
TGA1	tA(UGC)A	YGR045C	P53229	120 aa		6.62	□□□□□ -1.35
TGA1	tA(UGC)A	FIT1	Q04433	528 aa		6.62	□□□□□ -1.35
TGA1	tA(UGC)A	ASM4	Q05166	528 aa		6.62	□□□□□ -1.35
TGA1	tA(UGC)A	SRL1	Q08673	210 aa		6.62	□□□□□ -1.35
TGA1	tA(UGC)A	YOR283W	Q12040	230 aa	Known RBP	6.62	□□□□□ -1.35
TGA1	tA(UGC)A	IES3	Q12345	250 aa		6.62	□□□□□ -1.35
TGA1	tA(UGC)A	TFC7	Q12415	435 aa		6.62	□□□□□ -1.35
TGA1	tA(UGC)A	DPB2	P24482	689 aa	Predicted RBP	6.61	□□□□□ -1.35
TGA1	tA(UGC)A	BUD23	P25627	275 aa	Predicted RBP	6.61	□□□□□ -1.35
TGA1	tA(UGC)A	FMT1	P32785	401 aa		6.61	□□□□□ -1.35
TGA1	tA(UGC)A	RIB7	P33312	244 aa		6.61	□□□□□ -1.35
TGA1	tA(UGC)A	YBR197C	P38306	217 aa		6.61	□□□□□ -1.35
TGA1	tA(UGC)A	YHK8	P38776	514 aa		6.61	□□□□□ -1.35
TGA1	tA(UGC)A	SOL1	P50278	321 aa		6.61	□□□□□ -1.35
TGA1	tA(UGC)A	MRPL22	P53881	309 aa		6.61	□□□□□ -1.35
TGA1	tA(UGC)A	YDR286C	Q05530	114 aa		6.61	□□□□□ -1.35
TGA1	tA(UGC)A	NGL1	Q08213	363 aa	Known RBP	6.61	□□□□□ -1.35
TGA1	tA(UGC)A	YPR071W	Q12346	211 aa		6.61	□□□□□ -1.35
TGA1	tA(UGC)A	ATO3	Q12359	275 aa		6.61	□□□□□ -1.35
TGA1	tA(UGC)A	DGK1	Q12382	290 aa		6.61	□□□□□ -1.35
TGA1	tA(UGC)A	BGL2	P15703	313 aa	Known RBP	6.6	□□□□□ -1.35
TGA1	tA(UGC)A	FUS3	P16892	353 aa	Known RBP	6.6	□□□□□ -1.35
TGA1	tA(UGC)A	CUE1	P38428	203 aa		6.6	□□□□□ -1.35
TGA1	tA(UGC)A	CAT5	P41735	233 aa		6.6	□□□□□ -1.35
TGA1	tA(UGC)A	YNL234W	P53857	426 aa		6.6	□□□□□ -1.35
TGA1	tA(UGC)A	DCP1	Q12517	231 aa	Predicted RBP	6.6	□□□□□ -1.35
TGA1	tA(UGC)A	YLR365W	Q7LIF2	110 aa		6.6	□□□□□ -1.35
TGA1	tA(UGC)A	PMU1	P36069	295 aa		6.59	□□□□□ -1.35
TGA1	tA(UGC)A	PRY2	P36110	329 aa		6.59	□□□□□ -1.35
TGA1	tA(UGC)A	MRPL27	P36526	146 aa	Predicted RBP	6.59	□□□□□ -1.35
TGA1	tA(UGC)A	DAL4	Q04895	635 aa		6.59	□□□□□ -1.35
TGA1	tA(UGC)A	YPR108W-A	Q3E7B3	70 aa		6.59	□□□□□ -1.35
TGA1	tA(UGC)A	GAL1	P04385	528 aa		6.58	□□□□□ -1.36
TGA1	tA(UGC)A	TAL1	P15019	335 aa	Known RBP	6.58	□□□□□ -1.36
TGA1	tA(UGC)A	SEN2	P16658	377 aa		6.58	□□□□□ -1.36
TGA1	tA(UGC)A	MRP20	P32387	263 aa		6.58	□□□□□ -1.36
TGA1	tA(UGC)A	REC104	P33323	182 aa		6.58	□□□□□ -1.36
TGA1	tA(UGC)A	YCR041W	P37265	110 aa		6.58	□□□□□ -1.36
TGA1	tA(UGC)A	YHR122W	P38829	231 aa		6.58	□□□□□ -1.36
TGA1	tA(UGC)A	FCY21	P40039	528 aa		6.58	□□□□□ -1.36
TGA1	tA(UGC)A	IRC18	P47056	224 aa		6.58	□□□□□ -1.36
TGA1	tA(UGC)A	SRL4	Q03085	281 aa		6.58	□□□□□ -1.36
TGA1	tA(UGC)A	YOR292C	Q08743	309 aa		6.58	□□□□□ -1.36
TGA1	tA(UGC)A	YOR385W	Q08909	290 aa		6.58	□□□□□ -1.36
TGA1	tA(UGC)A	ADE8	P04161	214 aa		6.57	□□□□□ -1.36
TGA1	tA(UGC)A	SPT14	P32363	452 aa		6.57	□□□□□ -1.36
TGA1	tA(UGC)A	UTP30	P36144	274 aa	Known RBP	6.57	□□□□□ -1.36
TGA1	tA(UGC)A	ECM31	P38122	312 aa		6.57	□□□□□ -1.36
TGA1	tA(UGC)A	IKI1	P38874	309 aa		6.57	□□□□□ -1.36
TGA1	tA(UGC)A	YJR011C	P47086	261 aa	Predicted RBP	6.57	□□□□□ -1.36
TGA1	tA(UGC)A	CWC23	P52868	283 aa	Predicted RBP	6.57	□□□□□ -1.36
TGA1	tA(UGC)A	NGL2	Q03264	515 aa	Known RBP	6.57	□□□□□ -1.36
TGA1	tA(UGC)A	TY1A-MR1	Q04215	440 aa		6.57	□□□□□ -1.36
TGA1	tA(UGC)A	RGC1	Q06108	1083 aa	Known RBP	6.57	□□□□□ -1.36
TGA1	tA(UGC)A	SYM1	Q06563	197 aa		6.57	□□□□□ -1.36
TGA1	tA(UGC)A	CYC1	P00044	109 aa	Predicted RBP	6.56	□□□□□ -1.36
TGA1	tA(UGC)A	HEM13	P11353	328 aa	Known RBP	6.56	□□□□□ -1.36
TGA1	tA(UGC)A	TOM40	P23644	387 aa	Known RBP	6.56	□□□□□ -1.36
TGA1	tA(UGC)A	ERG2	P32352	222 aa		6.56	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 48.1 ms