RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C DPM1P14020 267 aaKnown RBP1.65□□□□□ -2.15
ATG38YLR211C YCR087C-AP37263 153 aa1.65□□□□□ -2.15
ATG38YLR211C RPE1P46969 238 aa1.65□□□□□ -2.15
ATG38YLR211C IRC18P47056 224 aa1.65□□□□□ -2.15
ATG38YLR211C BXI1P48558 297 aa1.65□□□□□ -2.15
ATG38YLR211C MMS2P53152 137 aa1.65□□□□□ -2.15
ATG38YLR211C MRH4P53166 561 aa1.65□□□□□ -2.15
ATG38YLR211C EFM5P53200 248 aaKnown RBP1.65□□□□□ -2.15
ATG38YLR211C GTR2P53290 341 aa1.65□□□□□ -2.15
ATG38YLR211C RSM27P53305 110 aa1.65□□□□□ -2.15
ATG38YLR211C PDR17P53844 350 aa1.65□□□□□ -2.15
ATG38YLR211C AAH1P53909 347 aa1.65□□□□□ -2.15
ATG38YLR211C YPL039WQ03080 316 aa1.65□□□□□ -2.15
ATG38YLR211C GOT1Q03554 138 aa1.65□□□□□ -2.15
ATG38YLR211C YML096WQ04489 525 aa1.65□□□□□ -2.15
ATG38YLR211C DRS2P39524 1355 aa1.64□□□□□ -2.15
ATG38YLR211C ERD2P18414 219 aa1.64□□□□□ -2.15
ATG38YLR211C DPB2P24482 689 aaPredicted RBP1.64□□□□□ -2.15
ATG38YLR211C CSG2P35206 410 aa1.64□□□□□ -2.15
ATG38YLR211C NRG2P38082 220 aa1.64□□□□□ -2.15
ATG38YLR211C SPL2P38839 148 aa1.64□□□□□ -2.15
ATG38YLR211C SRP14P38985 146 aa1.64□□□□□ -2.15
ATG38YLR211C SUR2P38992 349 aa1.64□□□□□ -2.15
ATG38YLR211C FCY21P40039 528 aa1.64□□□□□ -2.15
ATG38YLR211C COG3P40094 801 aa1.64□□□□□ -2.15
ATG38YLR211C POG1P40473 351 aa1.64□□□□□ -2.15
ATG38YLR211C YJL016WP47072 561 aa1.64□□□□□ -2.15
ATG38YLR211C SNO1Q03144 224 aa1.64□□□□□ -2.15
ATG38YLR211C EMI1Q04406 187 aa1.64□□□□□ -2.15
ATG38YLR211C YDR124WQ04608 324 aa1.64□□□□□ -2.15
ATG38YLR211C SUE1Q06524 206 aa1.64□□□□□ -2.15
ATG38YLR211C YOL019WQ08157 551 aa1.64□□□□□ -2.15
ATG38YLR211C SYC1Q08553 188 aaPredicted RBP1.64□□□□□ -2.15
ATG38YLR211C GCN3P14741 305 aa1.63□□□□□ -2.15
ATG38YLR211C SSH1P38353 490 aaKnown RBP1.63□□□□□ -2.15
ATG38YLR211C YER121WP40076 114 aa1.63□□□□□ -2.15
ATG38YLR211C PEX17P40155 199 aa1.63□□□□□ -2.15
ATG38YLR211C YJL028WP47062 111 aa1.63□□□□□ -2.15
ATG38YLR211C YJR141WP47172 347 aaPredicted RBP1.63□□□□□ -2.15
ATG38YLR211C YOR268CQ08734 132 aa1.63□□□□□ -2.15
ATG38YLR211C YBL112CQ3E7Y4 105 aa1.63□□□□□ -2.15
ATG38YLR211C YHR214C-EQ8TGK0 99 aa1.63□□□□□ -2.15
ATG38YLR211C IPP1P00817 287 aaKnown RBP1.62□□□□□ -2.15
ATG38YLR211C PUT1P09368 476 aa1.62□□□□□ -2.15
ATG38YLR211C GCY1P14065 312 aaKnown RBP RIP-Chip data1.62□□□□□ -2.15not detected
ATG38YLR211C VPS51P36116 164 aa1.62□□□□□ -2.15
ATG38YLR211C CAF4P36130 643 aa1.62□□□□□ -2.15
ATG38YLR211C MSA2P36157 363 aa1.62□□□□□ -2.15
ATG38YLR211C MRPL28P36527 147 aa1.62□□□□□ -2.15
ATG38YLR211C ECM33P38248 429 aaKnown RBP1.62□□□□□ -2.15
ATG38YLR211C YKE4P40544 346 aa1.62□□□□□ -2.15
ATG38YLR211C CAT5P41735 233 aa1.62□□□□□ -2.15
ATG38YLR211C YJR056CP47115 236 aa1.62□□□□□ -2.15
ATG38YLR211C CAB4P53332 305 aa1.62□□□□□ -2.15
ATG38YLR211C ERV29P53337 310 aa1.62□□□□□ -2.15
ATG38YLR211C PET191Q02772 108 aa1.62□□□□□ -2.15
ATG38YLR211C YDR248CQ03786 193 aa1.62□□□□□ -2.15
ATG38YLR211C GRH1Q04410 372 aaKnown RBP1.62□□□□□ -2.15
ATG38YLR211C GRX8Q05926 109 aa1.62□□□□□ -2.15
ATG38YLR211C NOC4Q06512 552 aaPredicted RBP1.62□□□□□ -2.15
ATG38YLR211C YOL160WQ08321 113 aa1.62□□□□□ -2.15
ATG38YLR211C SLD7Q08457 257 aa1.62□□□□□ -2.15
ATG38YLR211C YNG1Q08465 219 aa1.62□□□□□ -2.15
ATG38YLR211C USB1Q12208 290 aaKnown RBP1.62□□□□□ -2.15
ATG38YLR211C SHG1P38337 142 aa1.61□□□□□ -2.15
ATG38YLR211C YHI9P38765 294 aa1.61□□□□□ -2.15
ATG38YLR211C MRPL49P40858 161 aaPredicted RBP1.61□□□□□ -2.15
ATG38YLR211C AIM25P47140 327 aa1.61□□□□□ -2.15
ATG38YLR211C NRK1P53915 240 aa1.61□□□□□ -2.15
ATG38YLR211C YMR279CQ03263 540 aa1.61□□□□□ -2.15
ATG38YLR211C YHR086W-AQ3E746 53 aa1.61□□□□□ -2.15
ATG38YLR211C IGO2Q9P305 131 aa1.61□□□□□ -2.15
ATG38YLR211C ADH3P07246 375 aaKnown RBP1.6□□□□□ -2.15
ATG38YLR211C MRS1P07266 363 aa1.6□□□□□ -2.15
ATG38YLR211C SEC22P22214 214 aa1.6□□□□□ -2.15
ATG38YLR211C TOM40P23644 387 aaKnown RBP1.6□□□□□ -2.15
ATG38YLR211C TRX3P25372 127 aa1.6□□□□□ -2.15
ATG38YLR211C TAH1P25638 111 aaPredicted RBP1.6□□□□□ -2.15
ATG38YLR211C PTM1P32857 523 aa1.6□□□□□ -2.15
ATG38YLR211C APS1P35181 156 aa1.6□□□□□ -2.15
ATG38YLR211C ECM13P38195 257 aa1.6□□□□□ -2.15
ATG38YLR211C AME1P38313 324 aa1.6□□□□□ -2.15
ATG38YLR211C FAR7P43592 221 aa1.6□□□□□ -2.15
ATG38YLR211C YJL027CP47063 138 aaPredicted RBP1.6□□□□□ -2.15
ATG38YLR211C MDM34P53083 459 aa1.6□□□□□ -2.15
ATG38YLR211C YNL140CP53910 189 aa1.6□□□□□ -2.15
ATG38YLR211C YLR460CP54007 376 aa1.6□□□□□ -2.15
ATG38YLR211C INM2Q05533 292 aa1.6□□□□□ -2.15
ATG38YLR211C YET3Q07451 203 aa1.6□□□□□ -2.15
ATG38YLR211C YLR030WQ07967 263 aa1.6□□□□□ -2.15
ATG38YLR211C BRX1Q08235 291 aaKnown RBP1.6□□□□□ -2.15
ATG38YLR211C MDM32Q12171 622 aa1.6□□□□□ -2.15
ATG38YLR211C PST1Q12355 444 aa1.6□□□□□ -2.15
ATG38YLR211C NUP157P40064 1391 aaKnown RBP1.59□□□□□ -2.15
ATG38YLR211C YEL009C-AA0A023PZF2 135 aa1.59□□□□□ -2.15
ATG38YLR211C QCR2P07257 368 aa1.59□□□□□ -2.15
ATG38YLR211C SCO1P23833 295 aa1.59□□□□□ -2.15
ATG38YLR211C TRR1P29509 319 aaKnown RBP1.59□□□□□ -2.15
ATG38YLR211C ERG24P32462 438 aaKnown RBP1.59□□□□□ -2.15
ATG38YLR211C UBC6P33296 250 aaPredicted RBP1.59□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 219.5 ms