RNA–Protein interactions for RNA: YJR055W

HIT1, Transcript of Protein involved in C/D snoRNP assembly, yeastyeast

Gene HIT1, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIT1YJR055W PRM15Q03262 622 aa0.99□□□□□ -2.25
HIT1YJR055W GOT1Q03554 138 aa0.99□□□□□ -2.25
HIT1YJR055W YLR179CQ06252 201 aaKnown RBP0.99□□□□□ -2.25
HIT1YJR055W ATG17Q06410 417 aa0.99□□□□□ -2.25
HIT1YJR055W BBP1Q12365 385 aa0.99□□□□□ -2.25
HIT1YJR055W IPP1P00817 287 aaKnown RBP0.98□□□□□ -2.25
HIT1YJR055W RCN1P36054 211 aa0.98□□□□□ -2.25
HIT1YJR055W YHL026CP38740 315 aa0.98□□□□□ -2.25
HIT1YJR055W MEP1P40260 492 aa0.98□□□□□ -2.25
HIT1YJR055W SNZ3P43545 298 aa0.98□□□□□ -2.25
HIT1YJR055W MDM34P53083 459 aa0.98□□□□□ -2.25
HIT1YJR055W RHO3Q00245 231 aaKnown RBP0.98□□□□□ -2.25
HIT1YJR055W CDC14Q00684 551 aa0.98□□□□□ -2.25
HIT1YJR055W CGI121Q03705 181 aaKnown RBP0.98□□□□□ -2.25
HIT1YJR055W YDR124WQ04608 324 aa0.98□□□□□ -2.25
HIT1YJR055W COX20Q04935 205 aa0.98□□□□□ -2.25
HIT1YJR055W FCF1Q05498 189 aaPredicted RBP0.98□□□□□ -2.25
HIT1YJR055W YPR098CQ06089 161 aa0.98□□□□□ -2.25
HIT1YJR055W YOR097CQ12274 175 aaPredicted RBP0.98□□□□□ -2.25
HIT1YJR055W YIL046W-AQ3E7Z4 54 aa0.98□□□□□ -2.25
HIT1YJR055W RPL26AP05743 127 aaKnown RBP0.97□□□□□ -2.25
HIT1YJR055W PUT1P09368 476 aa0.97□□□□□ -2.25
HIT1YJR055W RSR1P13856 272 aa0.97□□□□□ -2.25
HIT1YJR055W DPM1P14020 267 aaKnown RBP0.97□□□□□ -2.25
HIT1YJR055W RNA15P25299 296 aaPredicted RBP0.97□□□□□ -2.25
HIT1YJR055W SRB4P32569 687 aa0.97□□□□□ -2.25
HIT1YJR055W PHO88P38264 188 aaPredicted RBP0.97□□□□□ -2.25
HIT1YJR055W PRS2P38620 318 aaKnown RBP0.97□□□□□ -2.25
HIT1YJR055W COS8P38723 381 aa0.97□□□□□ -2.25
HIT1YJR055W BIG1P38813 335 aa0.97□□□□□ -2.25
HIT1YJR055W BNA6P43619 295 aa0.97□□□□□ -2.25
HIT1YJR055W OST2P46964 130 aa0.97□□□□□ -2.25
HIT1YJR055W YJL016WP47072 561 aa0.97□□□□□ -2.25
HIT1YJR055W USE1P53146 245 aa0.97□□□□□ -2.25
HIT1YJR055W RPL26BP53221 127 aaKnown RBP0.97□□□□□ -2.25
HIT1YJR055W SWS2P53937 143 aa0.97□□□□□ -2.25
HIT1YJR055W EMI1Q04406 187 aa0.97□□□□□ -2.25
HIT1YJR055W LOA1Q06508 300 aa0.97□□□□□ -2.25
HIT1YJR055W YRA1Q12159 226 aaKnown RBP0.97□□□□□ -2.25
HIT1YJR055W AGC1Q12482 902 aa0.97□□□□□ -2.25
HIT1YJR055W YPL247CQ12523 523 aa0.97□□□□□ -2.25
HIT1YJR055W COX2P00410 251 aa0.96□□□□□ -2.26
HIT1YJR055W POL30P15873 258 aaKnown RBP0.96□□□□□ -2.26
HIT1YJR055W GDH2P33327 1092 aaKnown RBP0.96□□□□□ -2.26
HIT1YJR055W YHB1P39676 399 aaKnown RBP0.96□□□□□ -2.26
HIT1YJR055W COG3P40094 801 aa0.96□□□□□ -2.26
HIT1YJR055W DSN1P40568 576 aa0.96□□□□□ -2.26
HIT1YJR055W SNZ2P53824 298 aa0.96□□□□□ -2.26
HIT1YJR055W PEX12Q04370 399 aa0.96□□□□□ -2.26
HIT1YJR055W KAP95Q06142 861 aaKnown RBP0.96□□□□□ -2.26
HIT1YJR055W CTS2Q06350 511 aa0.96□□□□□ -2.26
HIT1YJR055W RRP40Q08285 240 aaKnown RBP0.96□□□□□ -2.26
HIT1YJR055W YOR268CQ08734 132 aa0.96□□□□□ -2.26
HIT1YJR055W YPL257WQ08974 193 aa0.96□□□□□ -2.26
HIT1YJR055W VPS68Q12016 184 aa0.96□□□□□ -2.26
HIT1YJR055W MED4Q12343 284 aa0.96□□□□□ -2.26
HIT1YJR055W ATO3Q12359 275 aa0.96□□□□□ -2.26
HIT1YJR055W YHR086W-AQ3E746 53 aa0.96□□□□□ -2.26
HIT1YJR055W YKR104WP0CE69 306 aa0.95□□□□□ -2.26
HIT1YJR055W SEC22P22214 214 aa0.95□□□□□ -2.26
HIT1YJR055W NRG2P38082 220 aa0.95□□□□□ -2.26
HIT1YJR055W YHR127WP38833 243 aaKnown RBP0.95□□□□□ -2.26
HIT1YJR055W YER189WP40104 122 aa0.95□□□□□ -2.26
HIT1YJR055W YMR144WP40214 342 aaKnown RBP0.95□□□□□ -2.26
HIT1YJR055W TIF34P40217 347 aaKnown RBP0.95□□□□□ -2.26
HIT1YJR055W ARC15P40518 154 aaRIP-Chip data0.95□□□□□ -2.26not detected
HIT1YJR055W SNX4P47057 423 aa0.95□□□□□ -2.26
HIT1YJR055W YJR146WP47174 117 aa0.95□□□□□ -2.26
HIT1YJR055W YGR026WP53217 278 aa0.95□□□□□ -2.26
HIT1YJR055W COS6P53344 381 aa0.95□□□□□ -2.26
HIT1YJR055W LAP3Q01532 483 aaKnown RBP RIP-Chip data0.95□□□□□ -2.26not detected
HIT1YJR055W SPG4Q04438 115 aa0.95□□□□□ -2.26
HIT1YJR055W SSQ1Q05931 657 aaPredicted RBP0.95□□□□□ -2.26
HIT1YJR055W SDO1Q07953 250 aaKnown RBP0.95□□□□□ -2.26
HIT1YJR055W SYC1Q08553 188 aaPredicted RBP0.95□□□□□ -2.26
HIT1YJR055W YCT1Q12235 531 aa0.95□□□□□ -2.26
HIT1YJR055W YOR029WQ12243 111 aa0.95□□□□□ -2.26
HIT1YJR055W EMC6Q12431 108 aa0.95□□□□□ -2.26
HIT1YJR055W SNF8Q12483 233 aa0.95□□□□□ -2.26
HIT1YJR055W YLR462WO13556 202 aa0.94□□□□□ -2.26
HIT1YJR055W MSF1P08425 469 aa0.94□□□□□ -2.26
HIT1YJR055W YHR032W-AP0C5N6 59 aa0.94□□□□□ -2.26
HIT1YJR055W COS2P0CX12 379 aa0.94□□□□□ -2.26
HIT1YJR055W COS3P0CX13 379 aa0.94□□□□□ -2.26
HIT1YJR055W SCO1P23833 295 aa0.94□□□□□ -2.26
HIT1YJR055W PEX34P25584 144 aa0.94□□□□□ -2.26
HIT1YJR055W SRX1P36077 127 aa0.94□□□□□ -2.26
HIT1YJR055W MSA2P36157 363 aa0.94□□□□□ -2.26
HIT1YJR055W PRS4P38063 326 aaPredicted RBP0.94□□□□□ -2.26
HIT1YJR055W YEL075CP39972 122 aa0.94□□□□□ -2.26
HIT1YJR055W SMB1P40018 196 aaKnown RBP0.94□□□□□ -2.26
HIT1YJR055W FIS1P40515 155 aa0.94□□□□□ -2.26
HIT1YJR055W MRPL49P40858 161 aaPredicted RBP0.94□□□□□ -2.26
HIT1YJR055W CIS3P47001 227 aa0.94□□□□□ -2.26
HIT1YJR055W ILM1P47155 203 aa0.94□□□□□ -2.26
HIT1YJR055W DAN1P47178 298 aa0.94□□□□□ -2.26
HIT1YJR055W CTF19Q02732 369 aa0.94□□□□□ -2.26
HIT1YJR055W INM2Q05533 292 aa0.94□□□□□ -2.26
HIT1YJR055W YLR173WQ06247 608 aa0.94□□□□□ -2.26
HIT1YJR055W PAM18Q07914 168 aa0.94□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 174.4 ms