RNA–Protein interactions for RNA: YIL138C

TPM2, Transcript of Minor isoform of tropomyosin, yeastyeast

Gene TPM2, Length 486 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPM2YIL138C RGM1Q00453 211 aa1.55□□□□□ -2.16
TPM2YIL138C EMI1Q04406 187 aa1.55□□□□□ -2.16
TPM2YIL138C YMR114CQ04471 368 aaKnown RBP1.55□□□□□ -2.16
TPM2YIL138C ATG17Q06410 417 aa1.55□□□□□ -2.16
TPM2YIL138C YPR147CQ06522 304 aaKnown RBP1.55□□□□□ -2.16
TPM2YIL138C SDO1Q07953 250 aaKnown RBP1.55□□□□□ -2.16
TPM2YIL138C TY3A-GQ12173 290 aa1.55□□□□□ -2.16
TPM2YIL138C YPR011CQ12251 326 aa1.55□□□□□ -2.16
TPM2YIL138C SMT3Q12306 101 aaKnown RBP1.55□□□□□ -2.16
TPM2YIL138C GEP5Q12393 293 aa1.55□□□□□ -2.16
TPM2YIL138C NOT5Q12514 560 aaPredicted RBP1.55□□□□□ -2.16
TPM2YIL138C YBL008W-AQ3E821 79 aa1.55□□□□□ -2.16
TPM2YIL138C TY3A-IQ99219 290 aa1.55□□□□□ -2.16
TPM2YIL138C RNA15P25299 296 aaPredicted RBP1.54□□□□□ -2.16
TPM2YIL138C GDH2P33327 1092 aaKnown RBP1.54□□□□□ -2.16
TPM2YIL138C SGE1P33335 543 aa1.54□□□□□ -2.16
TPM2YIL138C PRS4P38063 326 aaPredicted RBP1.54□□□□□ -2.16
TPM2YIL138C MRX3P38172 270 aa1.54□□□□□ -2.16
TPM2YIL138C YGP1P38616 354 aaKnown RBP1.54□□□□□ -2.16
TPM2YIL138C SMB1P40018 196 aaKnown RBP1.54□□□□□ -2.16
TPM2YIL138C SMX2P40204 77 aaKnown RBP1.54□□□□□ -2.16
TPM2YIL138C USE1P53146 245 aa1.54□□□□□ -2.16
TPM2YIL138C HOP2P53187 214 aa1.54□□□□□ -2.16
TPM2YIL138C YLR173WQ06247 608 aa1.54□□□□□ -2.16
TPM2YIL138C YLR179CQ06252 201 aaKnown RBP1.54□□□□□ -2.16
TPM2YIL138C YOR268CQ08734 132 aa1.54□□□□□ -2.16
TPM2YIL138C YOR029WQ12243 111 aa1.54□□□□□ -2.16
TPM2YIL138C MYO1P08964 1928 aa1.54□□□□□ -2.16
TPM2YIL138C SNA3P14359 133 aa1.53□□□□□ -2.16
TPM2YIL138C PPH21P23594 369 aa1.53□□□□□ -2.16
TPM2YIL138C RPT5P33297 434 aaKnown RBP1.53□□□□□ -2.16
TPM2YIL138C KDX1P36005 433 aa1.53□□□□□ -2.16
TPM2YIL138C DRE2P36152 348 aa1.53□□□□□ -2.16
TPM2YIL138C MRPL39P36533 70 aa1.53□□□□□ -2.16
TPM2YIL138C ECM13P38195 257 aa1.53□□□□□ -2.16
TPM2YIL138C SNZ3P43545 298 aa1.53□□□□□ -2.16
TPM2YIL138C SNZ2P53824 298 aa1.53□□□□□ -2.16
TPM2YIL138C YNL134CP53912 376 aaKnown RBP1.53□□□□□ -2.16
TPM2YIL138C GOT1Q03554 138 aa1.53□□□□□ -2.16
TPM2YIL138C YDR124WQ04608 324 aa1.53□□□□□ -2.16
TPM2YIL138C YDR278CQ05612 105 aa1.53□□□□□ -2.16
TPM2YIL138C YPR098CQ06089 161 aa1.53□□□□□ -2.16
TPM2YIL138C SPO77Q06134 477 aa1.53□□□□□ -2.16
TPM2YIL138C RRP40Q08285 240 aaKnown RBP1.53□□□□□ -2.16
TPM2YIL138C ABP140Q08641 628 aaKnown RBP1.53□□□□□ -2.16
TPM2YIL138C RUD3Q12234 484 aaKnown RBP1.53□□□□□ -2.16
TPM2YIL138C SNF8Q12483 233 aa1.53□□□□□ -2.16
TPM2YIL138C SEY1Q99287 776 aa1.53□□□□□ -2.16
TPM2YIL138C YKR104WP0CE69 306 aa1.52□□□□□ -2.17
TPM2YIL138C DPM1P14020 267 aaKnown RBP1.52□□□□□ -2.17
TPM2YIL138C CBF1P17106 351 aa1.52□□□□□ -2.17
TPM2YIL138C SNF6P18888 332 aa1.52□□□□□ -2.17
TPM2YIL138C HOM6P31116 359 aaKnown RBP1.52□□□□□ -2.17
TPM2YIL138C YBR032WP38223 100 aa1.52□□□□□ -2.17
TPM2YIL138C FZO1P38297 855 aa1.52□□□□□ -2.17
TPM2YIL138C POP4P38336 279 aa1.52□□□□□ -2.17
TPM2YIL138C GLG2P47011 380 aa1.52□□□□□ -2.17
TPM2YIL138C YJR146WP47174 117 aa1.52□□□□□ -2.17
TPM2YIL138C RCF2P53721 224 aa1.52□□□□□ -2.17
TPM2YIL138C MRPL50P53724 139 aa1.52□□□□□ -2.17
TPM2YIL138C YNL247WP53852 767 aaKnown RBP1.52□□□□□ -2.17
TPM2YIL138C NOP13P53883 403 aaKnown RBP RIP-Chip data1.52□□□□□ -2.17not detected
TPM2YIL138C RHO3Q00245 231 aaKnown RBP1.52□□□□□ -2.17
TPM2YIL138C CTF19Q02732 369 aa1.52□□□□□ -2.17
TPM2YIL138C RRN5Q02983 363 aa1.52□□□□□ -2.17
TPM2YIL138C MZM1Q03429 123 aaPredicted RBP1.52□□□□□ -2.17
TPM2YIL138C FAR8Q05040 523 aa1.52□□□□□ -2.17
TPM2YIL138C RRS1Q08746 203 aaKnown RBP1.52□□□□□ -2.17
TPM2YIL138C MSH5Q12175 901 aa1.52□□□□□ -2.17
TPM2YIL138C MED4Q12343 284 aa1.52□□□□□ -2.17
TPM2YIL138C SNU23Q12368 194 aaPredicted RBP1.52□□□□□ -2.17
TPM2YIL138C TOM1Q03280 3268 aa1.51□□□□□ -2.17
TPM2YIL138C JIP3O13555 125 aa1.51□□□□□ -2.17
TPM2YIL138C RPL26AP05743 127 aaKnown RBP1.51□□□□□ -2.17
TPM2YIL138C SEC22P22214 214 aa1.51□□□□□ -2.17
TPM2YIL138C MRPL25P23369 157 aa1.51□□□□□ -2.17
TPM2YIL138C CLB6P32943 380 aa1.51□□□□□ -2.17
TPM2YIL138C YHL026CP38740 315 aa1.51□□□□□ -2.17
TPM2YIL138C AIM18P38884 321 aa1.51□□□□□ -2.17
TPM2YIL138C LIA1P47120 325 aaKnown RBP1.51□□□□□ -2.17
TPM2YIL138C YGL034CP53186 121 aa1.51□□□□□ -2.17
TPM2YIL138C RPL26BP53221 127 aaKnown RBP1.51□□□□□ -2.17
TPM2YIL138C SLM2P53955 656 aa1.51□□□□□ -2.17
TPM2YIL138C ARO80Q04052 950 aa1.51□□□□□ -2.17
TPM2YIL138C SPG4Q04438 115 aa1.51□□□□□ -2.17
TPM2YIL138C SPC24Q04477 213 aa1.51□□□□□ -2.17
TPM2YIL138C GRX8Q05926 109 aa1.51□□□□□ -2.17
TPM2YIL138C COQ10Q08058 207 aa1.51□□□□□ -2.17
TPM2YIL138C VPS68Q12016 184 aa1.51□□□□□ -2.17
TPM2YIL138C BBP1Q12365 385 aa1.51□□□□□ -2.17
TPM2YIL138C GPA2P10823 449 aa1.5□□□□□ -2.17
TPM2YIL138C GCY1P14065 312 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
TPM2YIL138C MGT1P26188 188 aa1.5□□□□□ -2.17
TPM2YIL138C EHD3P28817 500 aa1.5□□□□□ -2.17
TPM2YIL138C MEI4P29467 408 aa1.5□□□□□ -2.17
TPM2YIL138C RCN1P36054 211 aa1.5□□□□□ -2.17
TPM2YIL138C ETR1P38071 380 aa1.5□□□□□ -2.17
TPM2YIL138C GOS1P38736 223 aa1.5□□□□□ -2.17
TPM2YIL138C BFR1P38934 470 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17 RIP-Chip
TPM2YIL138C YHB1P39676 399 aaKnown RBP1.5□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 100.5 ms