RNA–Protein interactions for RNA: ENST00000619587.1

LHX3-203, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,698 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-203ENST00000619587 SPIRE2Q8WWL2 714 aa18.35■□□□□ 0.53
LHX3-203ENST00000619587 TRAPPC9Q96Q05 1148 aa18.35■□□□□ 0.53
LHX3-203ENST00000619587 PCMTD2Q9NV79 361 aa18.35■□□□□ 0.53
LHX3-203ENST00000619587 CHMP2AO43633 222 aa18.34■□□□□ 0.53
LHX3-203ENST00000619587 ECE2O60344 883 aa18.34■□□□□ 0.53
LHX3-203ENST00000619587 GAS8O95995 478 aa18.34■□□□□ 0.53
LHX3-203ENST00000619587 KPNB1Q14974 876 aaKnown RBP18.34■□□□□ 0.53
LHX3-203ENST00000619587 CTC1Q2NKJ3 1217 aa18.34■□□□□ 0.53
LHX3-203ENST00000619587 ACSBG2Q5FVE4 666 aa18.34■□□□□ 0.53
LHX3-203ENST00000619587 IZUMO3Q5VZ72 239 aa18.34■□□□□ 0.53
LHX3-203ENST00000619587 CCNJLQ8IV13 435 aa18.34■□□□□ 0.53
LHX3-203ENST00000619587 FAM178BQ8IXR5 827 aa18.34■□□□□ 0.53
LHX3-203ENST00000619587 ZSWIM2Q8NEG5 633 aa18.34■□□□□ 0.53
LHX3-203ENST00000619587 FAM81AQ8TBF8 368 aa18.34■□□□□ 0.53
LHX3-203ENST00000619587 ELMO3Q96BJ8 720 aa18.34■□□□□ 0.53
LHX3-203ENST00000619587 RBM41Q96IZ5 413 aaKnown RBP18.34■□□□□ 0.53
LHX3-203ENST00000619587 DCTN4Q9UJW0 460 aa18.34■□□□□ 0.53
LHX3-203ENST00000619587 MROH7Q68CQ1 1323 aa18.34■□□□□ 0.53
LHX3-203ENST00000619587 CALCAP01258 141 aa18.34■□□□□ 0.53
LHX3-203ENST00000619587 KCNA3P22001 575 aa18.34■□□□□ 0.53
LHX3-203ENST00000619587 MUTP22033 750 aa18.34■□□□□ 0.53
LHX3-203ENST00000619587 CA4P22748 312 aa18.34■□□□□ 0.53
LHX3-203ENST00000619587 MAGEA4P43358 317 aa18.34■□□□□ 0.53
LHX3-203ENST00000619587 GPATCH4Q5T3I0 446 aaKnown RBP18.34■□□□□ 0.53
LHX3-203ENST00000619587 CLNKQ7Z7G1 428 aa18.34■□□□□ 0.53
LHX3-203ENST00000619587 LINC00116Q8NCU8 138 aa18.34■□□□□ 0.53
LHX3-203ENST00000619587 SH3TC2Q8TF17 1288 aa18.34■□□□□ 0.53
LHX3-203ENST00000619587 RBM15Q96T37 977 aaKnown RBP eCLIP18.34■□□□□ 0.53
LHX3-203ENST00000619587 SLAIN2Q9P270 581 aa18.34■□□□□ 0.53
LHX3-203ENST00000619587 SPATA31A5Q5VU36 1347 aa18.33■□□□□ 0.53
LHX3-203ENST00000619587 SPATA31A6Q5VVP1 1343 aa18.33■□□□□ 0.53
LHX3-203ENST00000619587 SPATA31A7Q8IWB4 1347 aa18.33■□□□□ 0.53
LHX3-203ENST00000619587 KRT15P19012 456 aa18.33■□□□□ 0.53
LHX3-203ENST00000619587 CACNA2D1P54289 1103 aa18.33■□□□□ 0.53
LHX3-203ENST00000619587 OVGP1Q12889 678 aa18.33■□□□□ 0.53
LHX3-203ENST00000619587 CERKLQ49MI3 558 aaPredicted RBP18.33■□□□□ 0.53
LHX3-203ENST00000619587 Q4G0T1 1027 aa18.33■□□□□ 0.53
LHX3-203ENST00000619587 LRRC23Q53EV4 343 aaPredicted RBP18.33■□□□□ 0.53
LHX3-203ENST00000619587 ARL8BQ9NVJ2 186 aa18.33■□□□□ 0.53
LHX3-203ENST00000619587 KANSL3Q9P2N6 904 aa18.33■□□□□ 0.53
LHX3-203ENST00000619587 CAPN9O14815 690 aa18.33■□□□□ 0.52
LHX3-203ENST00000619587 LMNB2Q03252 620 aa18.33■□□□□ 0.52
LHX3-203ENST00000619587 DYNC1I2Q13409 638 aaKnown RBP18.33■□□□□ 0.52
LHX3-203ENST00000619587 SLC15A2Q16348 729 aa18.33■□□□□ 0.52
LHX3-203ENST00000619587 MOXD1Q6UVY6 613 aa18.33■□□□□ 0.52
LHX3-203ENST00000619587 PRR11Q96HE9 360 aaPredicted RBP18.33■□□□□ 0.52
LHX3-203ENST00000619587 DYDC2Q96IM9 177 aa18.33■□□□□ 0.52
LHX3-203ENST00000619587 KREMEN1Q96MU8 473 aa18.33■□□□□ 0.52
LHX3-203ENST00000619587 CYLDQ9NQC7 956 aa18.33■□□□□ 0.52
LHX3-203ENST00000619587 GTF3C4Q9UKN8 822 aa18.33■□□□□ 0.52
LHX3-203ENST00000619587 ZBTB12Q9Y330 459 aaPredicted RBP18.33■□□□□ 0.52
LHX3-203ENST00000619587 XIRP1Q702N8 1843 aaKnown RBP18.32■□□□□ 0.52
LHX3-203ENST00000619587 A0A1W2PPM1 405 aa18.32■□□□□ 0.52
LHX3-203ENST00000619587 TBX10O75333 385 aa18.32■□□□□ 0.52
LHX3-203ENST00000619587 LMNAP02545 664 aaKnown RBP18.32■□□□□ 0.52
LHX3-203ENST00000619587 GZMAP12544 262 aa18.32■□□□□ 0.52
LHX3-203ENST00000619587 RFX1P22670 979 aa18.32■□□□□ 0.52
LHX3-203ENST00000619587 CAV1Q03135 178 aa18.32■□□□□ 0.52
LHX3-203ENST00000619587 FASTKD3Q14CZ7 662 aaKnown RBP18.32■□□□□ 0.52
LHX3-203ENST00000619587 USH1GQ495M9 461 aa18.32■□□□□ 0.52
LHX3-203ENST00000619587 ODR4Q5SWX8 454 aa18.32■□□□□ 0.52
LHX3-203ENST00000619587 RGS9BPQ6ZS82 235 aa18.32■□□□□ 0.52
LHX3-203ENST00000619587 SYCP3Q8IZU3 236 aa18.32■□□□□ 0.52
LHX3-203ENST00000619587 POLR3CQ9BUI4 534 aaPredicted RBP18.32■□□□□ 0.52
LHX3-203ENST00000619587 SAYSD1Q9NPB0 183 aa18.32■□□□□ 0.52
LHX3-203ENST00000619587 LMCD1Q9NZU5 365 aa18.32■□□□□ 0.52
LHX3-203ENST00000619587 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.32■□□□□ 0.52
LHX3-203ENST00000619587 NEU2Q9Y3R4 380 aa18.32■□□□□ 0.52
LHX3-203ENST00000619587 SMCHD1A6NHR9 2005 aa18.32■□□□□ 0.52
LHX3-203ENST00000619587 WDR91A4D1P6 747 aa18.32■□□□□ 0.52
LHX3-203ENST00000619587 TBX3O15119 743 aa18.32■□□□□ 0.52
LHX3-203ENST00000619587 PRPF4O43172 522 aaKnown RBP eCLIP18.32■□□□□ 0.52
LHX3-203ENST00000619587 GSTA2P09210 222 aa18.32■□□□□ 0.52
LHX3-203ENST00000619587 SHROOM1Q2M3G4 852 aaPredicted RBP18.32■□□□□ 0.52
LHX3-203ENST00000619587 SLC45A4Q5BKX6 768 aa18.32■□□□□ 0.52
LHX3-203ENST00000619587 LLGL2Q6P1M3 1020 aa18.32■□□□□ 0.52
LHX3-203ENST00000619587 KBTBD2Q8IY47 623 aa18.32■□□□□ 0.52
LHX3-203ENST00000619587 ATL2Q8NHH9 583 aa18.32■□□□□ 0.52
LHX3-203ENST00000619587 RFWD2Q8NHY2 731 aa18.32■□□□□ 0.52
LHX3-203ENST00000619587 WDR60Q8WVS4 1066 aa18.32■□□□□ 0.52
LHX3-203ENST00000619587 SETDB2Q96T68 719 aa18.32■□□□□ 0.52
LHX3-203ENST00000619587 DDX4Q9NQI0 724 aaKnown RBP18.32■□□□□ 0.52
LHX3-203ENST00000619587 LNPEPQ9UIQ6 1025 aa18.32■□□□□ 0.52
LHX3-203ENST00000619587 ANAPC7Q9UJX3 599 aa18.32■□□□□ 0.52
LHX3-203ENST00000619587 RXRBP28702 533 aa18.31■□□□□ 0.52
LHX3-203ENST00000619587 HOXA13P31271 388 aaPredicted RBP18.31■□□□□ 0.52
LHX3-203ENST00000619587 OCRLQ01968 901 aa18.31■□□□□ 0.52
LHX3-203ENST00000619587 RASA3Q14644 834 aa18.31■□□□□ 0.52
LHX3-203ENST00000619587 MAPK6Q16659 721 aa18.31■□□□□ 0.52
LHX3-203ENST00000619587 EPC2Q52LR7 807 aa18.31■□□□□ 0.52
LHX3-203ENST00000619587 MFSD14BQ5SR56 506 aa18.31■□□□□ 0.52
LHX3-203ENST00000619587 C1orf220Q5T0J3 134 aa18.31■□□□□ 0.52
LHX3-203ENST00000619587 HHATQ5VTY9 493 aa18.31■□□□□ 0.52
LHX3-203ENST00000619587 LRRC74BQ6ZQY2 392 aa18.31■□□□□ 0.52
LHX3-203ENST00000619587 PLEKHO2Q8TD55 490 aa18.31■□□□□ 0.52
LHX3-203ENST00000619587 GRK7Q8WTQ7 553 aa18.31■□□□□ 0.52
LHX3-203ENST00000619587 ZNF75CPQ92670 426 aaPredicted RBP18.31■□□□□ 0.52
LHX3-203ENST00000619587 DDX50Q9BQ39 737 aaKnown RBP18.31■□□□□ 0.52
LHX3-203ENST00000619587 C12orf65Q9H3J6 166 aaKnown RBP18.31■□□□□ 0.52
LHX3-203ENST00000619587 TNRC6CQ9HCJ0 1690 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms